PDB Chemical Component 0MJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0MJ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O28 |
S26 |
1.455 |
1.421 |
| O27 |
S26 |
1.463 |
1.421 |
| N21 |
C20 |
1.482 |
1.468 |
| N21 |
C23 |
1.491 |
1.468 |
| S26 |
N25 |
1.639 |
1.656 |
| S26 |
C29 |
1.781 |
1.762 |
| C20 |
C22 |
1.554 |
1.531 |
| C22 |
N25 |
1.454 |
1.465 |
| C22 |
C19 |
1.554 |
1.531 |
| C23 |
C18 |
1.571 |
1.530 |
| C34 |
C29 |
1.412 |
1.383 |
| C34 |
C32 |
1.405 |
1.383 |
| C18 |
C19 |
1.563 |
1.531 |
| C18 |
C17 |
1.526 |
1.507 |
| C29 |
C30 |
1.411 |
1.382 |
| N16 |
C17 |
1.372 |
1.347 |
| N16 |
C7 |
1.482 |
1.465 |
| C32 |
C31 |
1.409 |
1.382 |
| C17 |
O24 |
1.228 |
1.212 |
| C30 |
C33 |
1.411 |
1.383 |
| C7 |
C1 |
1.567 |
1.530 |
| C31 |
C33 |
1.411 |
1.383 |
| C31 |
C35 |
1.537 |
1.507 |
| C9 |
C12 |
1.396 |
1.382 |
| C9 |
C3 |
1.412 |
1.383 |
| C1 |
C3 |
1.542 |
1.505 |
| C1 |
C4 |
1.544 |
1.505 |
| C12 |
C14 |
1.417 |
1.383 |
| C3 |
C5 |
1.417 |
1.385 |
| C8 |
C4 |
1.412 |
1.384 |
| C8 |
C13 |
1.425 |
1.382 |
| C4 |
C6 |
1.421 |
1.385 |
| C13 |
C15 |
1.410 |
1.383 |
| C14 |
C10 |
1.405 |
1.380 |
| C5 |
C10 |
1.398 |
1.391 |
| C5 |
O2 |
1.401 |
1.354 |
| C6 |
O2 |
1.409 |
1.355 |
| C6 |
C11 |
1.421 |
1.390 |
| C15 |
C11 |
1.405 |
1.379 |
| C1 |
H1 |
1.100 |
1.090 |
| C7 |
H2 |
1.100 |
1.090 |
| C7 |
H3 |
1.100 |
1.090 |
| C8 |
H4 |
1.080 |
1.080 |
| C9 |
H5 |
1.080 |
1.081 |
| C10 |
H6 |
1.080 |
1.080 |
| C11 |
H7 |
1.080 |
1.081 |
| C12 |
H8 |
1.080 |
1.080 |
| C13 |
H9 |
1.080 |
1.080 |
| C14 |
H10 |
1.080 |
1.080 |
| C15 |
H11 |
1.080 |
1.080 |
| N16 |
H12 |
1.000 |
0.970 |
| C18 |
H13 |
1.100 |
1.090 |
| C19 |
H14 |
1.100 |
1.090 |
| C19 |
H15 |
1.100 |
1.090 |
| C20 |
H16 |
1.100 |
1.090 |
| C20 |
H17 |
1.100 |
1.090 |
| N21 |
H18 |
1.000 |
1.008 |
| C22 |
H20 |
1.100 |
1.090 |
| C23 |
H21 |
1.100 |
1.090 |
| C23 |
H22 |
1.100 |
1.090 |
| N25 |
H23 |
1.000 |
0.970 |
| C30 |
H24 |
1.080 |
1.080 |
| C32 |
H25 |
1.080 |
1.080 |
| C33 |
H26 |
1.080 |
1.079 |
| C34 |
H27 |
1.080 |
1.080 |
| C35 |
H28 |
1.100 |
1.090 |
| C35 |
H29 |
1.100 |
1.090 |
| C35 |
H30 |
1.100 |
1.090 |
Bond Angles for 0MJ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O28 |
S26 |
C29 |
109.3 |
106.4 |
| O27 |
S26 |
C29 |
110.9 |
106.4 |
| N21 |
C20 |
C22 |
108.6 |
109.5 |
| N21 |
C20 |
H16 |
109.7 |
109.5 |
| N21 |
C20 |
H17 |
109.7 |
109.5 |
| C23 |
N21 |
H18 |
108.0 |
111.0 |
| N21 |
C23 |
H21 |
108.8 |
109.5 |
| N21 |
C23 |
H22 |
108.8 |
109.5 |
| S26 |
N25 |
H23 |
105.7 |
120.0 |
| S26 |
C29 |
C30 |
120.4 |
120.0 |
| C20 |
C22 |
N25 |
111.4 |
109.5 |
| C22 |
C20 |
H16 |
109.7 |
109.4 |
| C22 |
C20 |
H17 |
109.7 |
109.5 |
| C20 |
C22 |
H20 |
107.1 |
109.5 |
| N25 |
C22 |
H20 |
108.3 |
109.5 |
| C22 |
N25 |
H23 |
105.7 |
120.0 |
| C22 |
C19 |
H14 |
109.4 |
109.5 |
| C22 |
C19 |
H15 |
109.4 |
109.6 |
| C23 |
C18 |
H13 |
106.2 |
109.5 |
| C34 |
C32 |
H25 |
119.8 |
120.0 |
| C19 |
C18 |
H13 |
106.3 |
109.5 |
| C18 |
C19 |
H14 |
109.4 |
109.5 |
| C18 |
C19 |
H15 |
109.4 |
109.5 |
| C18 |
C17 |
O24 |
118.4 |
120.0 |
| C29 |
C30 |
C33 |
120.3 |
120.0 |
| C29 |
C30 |
H24 |
119.8 |
120.0 |
| N16 |
C17 |
O24 |
123.2 |
120.0 |
| C17 |
N16 |
H12 |
117.1 |
120.0 |
| N16 |
C7 |
H2 |
108.4 |
109.4 |
| N16 |
C7 |
H3 |
108.4 |
109.5 |
| C32 |
C31 |
C33 |
119.6 |
120.0 |
| C32 |
C31 |
C35 |
120.4 |
120.0 |
| C30 |
C33 |
C31 |
120.0 |
120.0 |
| C33 |
C30 |
H24 |
119.9 |
120.0 |
| C30 |
C33 |
H26 |
120.0 |
120.0 |
| C7 |
C1 |
H1 |
109.7 |
109.2 |
| C33 |
C31 |
C35 |
120.0 |
120.0 |
| C31 |
C33 |
H26 |
120.0 |
120.0 |
| C31 |
C35 |
H28 |
109.5 |
109.4 |
| C31 |
C35 |
H29 |
109.4 |
109.5 |
| C31 |
C35 |
H30 |
109.4 |
109.4 |
| C9 |
C12 |
C14 |
118.9 |
120.0 |
| C12 |
C9 |
H5 |
120.3 |
119.9 |
| C9 |
C12 |
H8 |
120.5 |
120.0 |
| C3 |
C1 |
C4 |
109.2 |
110.5 |
| C1 |
C3 |
C5 |
119.0 |
120.7 |
| C3 |
C1 |
H1 |
110.1 |
109.3 |
| C1 |
C4 |
C6 |
119.3 |
120.7 |
| C4 |
C1 |
H1 |
110.0 |
109.3 |
| C14 |
C12 |
H8 |
120.5 |
120.0 |
| C12 |
C14 |
H10 |
118.8 |
119.9 |
| C3 |
C5 |
C10 |
120.3 |
119.7 |
| C8 |
C13 |
C15 |
121.3 |
120.0 |
| C13 |
C8 |
H4 |
119.8 |
119.9 |
| C8 |
C13 |
H9 |
119.4 |
120.0 |
| C4 |
C6 |
C11 |
120.4 |
119.7 |
| C15 |
C13 |
H9 |
119.4 |
120.0 |
| C13 |
C15 |
H11 |
120.9 |
119.9 |
| C14 |
C10 |
H6 |
121.0 |
119.9 |
| C5 |
C10 |
H6 |
120.9 |
119.9 |
| C6 |
C11 |
H7 |
119.3 |
119.9 |
| C15 |
C11 |
H7 |
119.3 |
120.0 |
| H2 |
C7 |
H3 |
109.5 |
109.5 |
| H14 |
C19 |
H15 |
109.5 |
109.5 |
| H16 |
C20 |
H17 |
109.5 |
109.5 |
| H21 |
C23 |
H22 |
109.5 |
109.4 |
| H28 |
C35 |
H29 |
109.5 |
109.5 |
| H28 |
C35 |
H30 |
109.5 |
109.5 |
| H29 |
C35 |
H30 |
109.5 |
109.5 |
Torsion Angles for 0MJ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O27 |
S26 |
O28 |
C29 |
232.9 |
237.1 |
| O28 |
S26 |
N25 |
H23 |
124.2 |
131.5 |
| O28 |
S26 |
C29 |
C30 |
175.3 |
203.5 |
| O28 |
S26 |
O27 |
C29 |
126.3 |
122.9 |
| O27 |
S26 |
N25 |
H23 |
354.9 |
358.6 |
| O27 |
S26 |
C29 |
C30 |
305.8 |
336.4 |
| N21 |
C20 |
C22 |
N25 |
182.2 |
179.1 |
| C22 |
C20 |
N21 |
H16 |
240.1 |
240.0 |
| C22 |
C20 |
N21 |
H17 |
119.9 |
120.1 |
| N21 |
C20 |
C22 |
H20 |
300.5 |
299.2 |
| H16 |
C20 |
N21 |
H17 |
239.7 |
240.0 |
| C23 |
N21 |
C20 |
C22 |
303.5 |
298.3 |
| C23 |
N21 |
C20 |
H16 |
63.4 |
58.2 |
| C23 |
N21 |
C20 |
H17 |
183.6 |
178.2 |
| N21 |
C23 |
C18 |
H13 |
63.0 |
60.8 |
| H21 |
C23 |
N21 |
H22 |
240.8 |
119.9 |
| S26 |
N25 |
C22 |
H20 |
5.8 |
335.0 |
| C22 |
N25 |
S26 |
H23 |
238.0 |
179.9 |
| C29 |
S26 |
N25 |
H23 |
238.9 |
245.0 |
| S26 |
C29 |
C30 |
C33 |
179.0 |
180.0 |
| S26 |
C29 |
C30 |
H24 |
359.0 |
0.0 |
| N21 |
C20 |
C22 |
H16 |
119.9 |
120.0 |
| N21 |
C20 |
C22 |
H17 |
240.1 |
239.9 |
| N25 |
C22 |
C20 |
H20 |
241.7 |
240.0 |
| C20 |
C22 |
N25 |
H23 |
1.4 |
274.9 |
| C20 |
C22 |
C19 |
H14 |
62.3 |
182.5 |
| C20 |
C22 |
C19 |
H15 |
182.1 |
62.3 |
| H16 |
C20 |
C22 |
H17 |
120.3 |
120.0 |
| S26 |
N25 |
C22 |
H23 |
122.0 |
180.1 |
| N25 |
C22 |
C20 |
H16 |
62.3 |
59.2 |
| N25 |
C22 |
C20 |
H17 |
302.1 |
299.2 |
| C20 |
C22 |
N25 |
H20 |
117.6 |
120.0 |
| N25 |
C22 |
C19 |
H14 |
297.3 |
62.5 |
| N25 |
C22 |
C19 |
H15 |
57.2 |
302.4 |
| C22 |
C19 |
C18 |
H13 |
298.8 |
297.7 |
| C18 |
C19 |
C22 |
H14 |
239.9 |
119.9 |
| C18 |
C19 |
C22 |
H15 |
120.1 |
240.1 |
| H14 |
C19 |
C22 |
H15 |
240.1 |
120.1 |
| C19 |
C18 |
C23 |
H13 |
245.4 |
240.1 |
| C23 |
C18 |
C19 |
H14 |
293.3 |
177.5 |
| C23 |
C18 |
C19 |
H15 |
173.4 |
297.6 |
| C23 |
C18 |
C17 |
O24 |
124.8 |
119.9 |
| C34 |
C29 |
C30 |
H24 |
180.5 |
180.2 |
| C34 |
C32 |
C31 |
C35 |
180.5 |
180.0 |
| C22 |
C19 |
C18 |
H14 |
120.0 |
240.1 |
| C22 |
C19 |
C18 |
H15 |
239.9 |
120.0 |
| C23 |
C18 |
C19 |
H13 |
114.5 |
119.9 |
| C19 |
C18 |
C17 |
O24 |
358.2 |
360.0 |
| H14 |
C19 |
C18 |
H15 |
119.9 |
239.8 |
| N16 |
C17 |
C18 |
O24 |
180.2 |
180.0 |
| C18 |
C17 |
N16 |
H12 |
357.2 |
0.1 |
| C29 |
C30 |
C33 |
C31 |
359.9 |
360.0 |
| C33 |
C30 |
C29 |
H24 |
180.0 |
180.0 |
| C29 |
C30 |
C33 |
H26 |
179.9 |
180.0 |
| C18 |
C17 |
N16 |
O24 |
179.8 |
180.0 |
| C17 |
N16 |
C7 |
H2 |
14.0 |
60.0 |
| C17 |
N16 |
C7 |
H3 |
132.8 |
300.0 |
| N16 |
C7 |
C1 |
H1 |
288.9 |
55.5 |
| H2 |
C7 |
N16 |
H3 |
241.2 |
120.0 |
| C30 |
C33 |
C31 |
C32 |
359.4 |
359.8 |
| C33 |
C31 |
C32 |
C35 |
180.4 |
180.2 |
| C32 |
C31 |
C33 |
H26 |
179.4 |
179.8 |
| C32 |
C31 |
C35 |
H28 |
90.2 |
270.2 |
| C32 |
C31 |
C35 |
H29 |
210.2 |
30.2 |
| C32 |
C31 |
C35 |
H30 |
330.2 |
150.2 |
| O24 |
C17 |
N16 |
H12 |
177.5 |
180.0 |
| C29 |
C30 |
C33 |
H24 |
180.0 |
180.0 |
| C32 |
C31 |
C33 |
C30 |
359.4 |
359.8 |
| C30 |
C33 |
C31 |
C35 |
179.8 |
180.0 |
| C31 |
C33 |
C30 |
H26 |
180.0 |
180.0 |
| C3 |
C1 |
C7 |
H1 |
120.2 |
119.5 |
| C4 |
C1 |
C7 |
H1 |
239.2 |
240.5 |
| C32 |
C31 |
C33 |
C35 |
179.6 |
179.8 |
| C31 |
C33 |
C30 |
H24 |
179.8 |
180.0 |
| C30 |
C33 |
C31 |
H26 |
180.0 |
180.0 |
| C33 |
C31 |
C35 |
H28 |
269.8 |
90.0 |
| C33 |
C31 |
C35 |
H29 |
29.8 |
210.0 |
| C33 |
C31 |
C35 |
H30 |
149.8 |
330.0 |
| C32 |
C31 |
C35 |
C33 |
180.4 |
180.2 |
| C35 |
C31 |
C33 |
H26 |
359.8 |
0.0 |
| H28 |
C35 |
C31 |
H29 |
240.0 |
240.0 |
| H28 |
C35 |
C31 |
H30 |
120.0 |
120.0 |
| H29 |
C35 |
C31 |
H30 |
240.0 |
240.0 |
| C14 |
C12 |
C9 |
H8 |
180.0 |
180.0 |
| C9 |
C12 |
C14 |
H10 |
178.0 |
180.0 |
| C9 |
C3 |
C1 |
H1 |
29.5 |
41.5 |
| C9 |
C3 |
C5 |
C10 |
359.4 |
0.1 |
| C7 |
C1 |
C3 |
H1 |
240.0 |
240.6 |
| C3 |
C1 |
C4 |
C6 |
29.5 |
18.1 |
| C4 |
C1 |
C3 |
H1 |
120.9 |
120.3 |
| C1 |
C3 |
C5 |
C10 |
180.4 |
180.0 |
| C7 |
C1 |
C4 |
H1 |
120.6 |
119.4 |
| C4 |
C1 |
C3 |
C5 |
329.4 |
341.9 |
| C3 |
C1 |
C4 |
H1 |
239.1 |
239.6 |
| C1 |
C4 |
C6 |
C11 |
180.6 |
180.0 |
| C14 |
C12 |
C9 |
H5 |
182.8 |
179.9 |
| C9 |
C12 |
C14 |
H8 |
180.0 |
180.0 |
| C12 |
C14 |
C10 |
H6 |
179.8 |
180.0 |
| C5 |
C3 |
C1 |
C4 |
329.4 |
341.9 |
| C5 |
C3 |
C1 |
H1 |
208.5 |
221.6 |
| C3 |
C5 |
C10 |
H6 |
181.4 |
179.9 |
| C8 |
C4 |
C1 |
H1 |
330.2 |
318.5 |
| C8 |
C4 |
C6 |
C11 |
0.8 |
359.9 |
| C15 |
C13 |
C8 |
H9 |
180.0 |
180.0 |
| C8 |
C13 |
C15 |
H11 |
179.2 |
180.0 |
| C6 |
C4 |
C1 |
H1 |
150.4 |
138.4 |
| C4 |
C6 |
C11 |
H7 |
178.7 |
180.0 |
| C15 |
C13 |
C8 |
H4 |
180.4 |
180.0 |
| C8 |
C13 |
C15 |
H9 |
180.0 |
180.0 |
| C13 |
C15 |
C11 |
H7 |
181.3 |
180.0 |
| C9 |
C12 |
C14 |
C10 |
358.1 |
0.2 |
| C5 |
C10 |
C14 |
H6 |
180.0 |
179.9 |
| C14 |
C10 |
C5 |
H6 |
180.0 |
180.1 |
| C1 |
C3 |
C5 |
O2 |
3.5 |
0.0 |
| C1 |
C4 |
C6 |
O2 |
358.8 |
360.0 |
| C15 |
C11 |
C6 |
H7 |
180.0 |
180.0 |
| C8 |
C13 |
C15 |
C11 |
359.2 |
360.0 |
| C6 |
C11 |
C15 |
H7 |
180.0 |
180.0 |
| C3 |
C1 |
H1 |
C4 |
120.4 |
121.1 |
| H1 |
C1 |
C3 |
C5 |
208.5 |
221.6 |
| H1 |
C1 |
C4 |
C6 |
150.4 |
138.4 |
| N16 |
C7 |
H2 |
H3 |
118.1 |
240.0 |
| H2 |
C7 |
C1 |
H1 |
168.3 |
175.5 |
| N16 |
C7 |
H3 |
H2 |
241.9 |
120.0 |
| H3 |
C7 |
C1 |
H1 |
49.6 |
295.5 |
| H4 |
C8 |
C13 |
C15 |
180.4 |
180.0 |
| H4 |
C8 |
C13 |
H9 |
0.4 |
360.0 |
| H5 |
C9 |
C12 |
C14 |
182.8 |
179.9 |
| H5 |
C9 |
C12 |
H8 |
2.8 |
360.0 |
| C9 |
C12 |
H8 |
C14 |
180.0 |
180.0 |
| H8 |
C12 |
C9 |
H5 |
2.8 |
360.0 |
| H8 |
C12 |
C14 |
H10 |
358.0 |
0.0 |
| C8 |
C13 |
H9 |
C15 |
180.0 |
180.0 |
| H9 |
C13 |
C8 |
H4 |
0.4 |
360.0 |
| H9 |
C13 |
C15 |
H11 |
359.2 |
360.0 |
| H10 |
C14 |
C12 |
H8 |
358.0 |
0.0 |
| H10 |
C14 |
C10 |
H6 |
359.8 |
0.1 |
| H11 |
C15 |
C13 |
H9 |
359.2 |
360.0 |
| H11 |
C15 |
C11 |
H7 |
1.3 |
0.1 |
| H12 |
N16 |
C17 |
O24 |
177.5 |
180.0 |
| H12 |
N16 |
C7 |
H2 |
194.0 |
239.9 |
| H12 |
N16 |
C7 |
H3 |
312.8 |
119.9 |
| H13 |
C18 |
C19 |
H14 |
178.8 |
57.6 |
| H13 |
C18 |
C19 |
H15 |
58.9 |
177.8 |
| H13 |
C18 |
C17 |
O24 |
241.3 |
239.9 |
| C22 |
C19 |
H14 |
H15 |
119.8 |
239.8 |
| H14 |
C19 |
C18 |
H13 |
178.8 |
57.6 |
| C18 |
C19 |
H14 |
H15 |
240.1 |
120.1 |
| C22 |
C19 |
H15 |
H14 |
240.2 |
120.1 |
| H15 |
C19 |
C18 |
H13 |
58.9 |
177.8 |
| C18 |
C19 |
H15 |
H14 |
119.9 |
239.8 |
| N21 |
C20 |
H16 |
C22 |
240.8 |
240.0 |
| N21 |
C20 |
H16 |
H17 |
120.4 |
120.0 |
| H16 |
C20 |
C22 |
N25 |
62.3 |
59.2 |
| C22 |
C20 |
H16 |
H17 |
239.6 |
240.0 |
| H16 |
C20 |
C22 |
H20 |
180.6 |
179.2 |
| N21 |
C20 |
H17 |
C22 |
119.2 |
120.1 |
| N21 |
C20 |
H17 |
H16 |
239.6 |
240.0 |
| H17 |
C20 |
C22 |
N25 |
302.1 |
299.2 |
| C22 |
C20 |
H17 |
H16 |
120.4 |
119.9 |
| H17 |
C20 |
C22 |
H20 |
60.4 |
59.2 |
| H18 |
N21 |
C20 |
C22 |
64.4 |
62.4 |
| H18 |
N21 |
C20 |
H16 |
184.2 |
182.3 |
| H18 |
N21 |
C20 |
H17 |
304.5 |
302.3 |
| H18 |
N21 |
C23 |
H21 |
54.5 |
177.6 |
| H18 |
N21 |
C23 |
H22 |
173.8 |
57.7 |
| C20 |
C22 |
H20 |
N25 |
239.7 |
240.0 |
| H20 |
C22 |
C20 |
H16 |
180.6 |
179.2 |
| H20 |
C22 |
C20 |
H17 |
60.4 |
59.2 |
| H20 |
C22 |
N25 |
H23 |
243.9 |
154.9 |
| H20 |
C22 |
C19 |
H14 |
179.3 |
302.4 |
| H20 |
C22 |
C19 |
H15 |
299.2 |
182.2 |
| H21 |
C23 |
N21 |
H18 |
54.5 |
177.6 |
| N21 |
C23 |
H21 |
H22 |
118.8 |
240.0 |
| H21 |
C23 |
C18 |
H13 |
302.6 |
180.8 |
| H22 |
C23 |
N21 |
H18 |
173.8 |
57.7 |
| N21 |
C23 |
H22 |
H21 |
241.2 |
120.0 |
| H22 |
C23 |
C18 |
H13 |
183.4 |
300.6 |
| H23 |
N25 |
C22 |
H20 |
243.9 |
154.9 |
| C29 |
C30 |
H24 |
C33 |
180.0 |
180.0 |
| H24 |
C30 |
C33 |
C31 |
179.8 |
180.0 |
| H24 |
C30 |
C33 |
H26 |
359.8 |
360.0 |
| H25 |
C32 |
C31 |
C33 |
180.9 |
180.0 |
| H25 |
C32 |
C31 |
C35 |
0.5 |
359.8 |
| C30 |
C33 |
H26 |
C31 |
180.0 |
180.0 |
| H26 |
C33 |
C30 |
H24 |
359.8 |
360.0 |
| H26 |
C33 |
C31 |
C35 |
359.8 |
0.0 |
| H27 |
C34 |
C32 |
H25 |
359.4 |
0.3 |
| C31 |
C35 |
H28 |
H29 |
120.0 |
120.0 |
| C31 |
C35 |
H28 |
H30 |
240.0 |
240.1 |
| H29 |
C35 |
H28 |
H30 |
120.0 |
120.0 |
| C31 |
C35 |
H29 |
H28 |
240.0 |
240.0 |
| C31 |
C35 |
H29 |
H30 |
120.0 |
120.0 |
| H28 |
C35 |
H29 |
H30 |
240.0 |
240.0 |
| C31 |
C35 |
H30 |
H28 |
120.0 |
119.9 |
| C31 |
C35 |
H30 |
H29 |
240.0 |
240.0 |
| H28 |
C35 |
H30 |
H29 |
120.0 |
120.1 |