PDB Chemical Component 0M7
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0M7
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C10 |
C9 |
1.526 |
1.529 |
| C8 |
C9 |
1.505 |
1.530 |
| C8 |
C7 |
1.517 |
1.530 |
| C7 |
C6 |
1.528 |
1.530 |
| C6 |
N5 |
1.446 |
1.470 |
| O13 |
P3 |
1.534 |
1.480 |
| O12 |
P3 |
1.503 |
1.610 |
| C4 |
N5 |
1.456 |
1.469 |
| C4 |
C2 |
1.519 |
1.530 |
| P3 |
C2 |
1.805 |
1.823 |
| P3 |
O11 |
1.497 |
1.611 |
| O14 |
P1 |
1.521 |
1.480 |
| C2 |
P1 |
1.820 |
1.824 |
| P1 |
O16 |
1.485 |
1.610 |
| P1 |
O15 |
1.510 |
1.610 |
| O11 |
H1 |
0.950 |
0.966 |
| O12 |
H2 |
0.950 |
0.967 |
| C2 |
H3 |
1.100 |
1.090 |
| O15 |
H4 |
0.950 |
0.967 |
| O16 |
H5 |
0.951 |
0.968 |
| C4 |
H6 |
1.100 |
1.090 |
| C4 |
H7 |
1.100 |
1.091 |
| N5 |
H8 |
1.000 |
1.008 |
| C6 |
H10 |
1.100 |
1.089 |
| C6 |
H11 |
1.100 |
1.090 |
| C7 |
H12 |
1.100 |
1.091 |
| C7 |
H13 |
1.100 |
1.090 |
| C8 |
H14 |
1.100 |
1.090 |
| C8 |
H15 |
1.100 |
1.090 |
| C9 |
H16 |
1.100 |
1.089 |
| C9 |
H17 |
1.100 |
1.090 |
| C10 |
H18 |
1.100 |
1.091 |
| C10 |
H19 |
1.100 |
1.090 |
| C10 |
H20 |
1.100 |
1.089 |
Bond Angles for 0M7
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C10 |
C9 |
H16 |
109.7 |
109.5 |
| C10 |
C9 |
H17 |
109.7 |
109.5 |
| C9 |
C8 |
H14 |
109.5 |
109.4 |
| C9 |
C8 |
H15 |
109.5 |
109.5 |
| C8 |
C9 |
H16 |
109.7 |
109.4 |
| C8 |
C9 |
H17 |
109.7 |
109.5 |
| C8 |
C7 |
H12 |
109.2 |
109.5 |
| C8 |
C7 |
H13 |
109.2 |
109.5 |
| C7 |
C6 |
H10 |
109.4 |
109.5 |
| C7 |
C6 |
H11 |
109.4 |
109.4 |
| C6 |
N5 |
H8 |
107.0 |
111.0 |
| O13 |
P3 |
C2 |
106.9 |
109.5 |
| O12 |
P3 |
C2 |
101.2 |
109.5 |
| N5 |
C4 |
H6 |
110.2 |
109.5 |
| N5 |
C4 |
H7 |
110.2 |
109.4 |
| C4 |
N5 |
H8 |
107.0 |
111.0 |
| C4 |
C2 |
H3 |
112.3 |
109.5 |
| P3 |
C2 |
P1 |
113.2 |
109.5 |
| P3 |
C2 |
H3 |
108.6 |
109.5 |
| P3 |
O11 |
H1 |
109.5 |
114.0 |
| O14 |
P1 |
O16 |
111.6 |
109.5 |
| C2 |
P1 |
O16 |
107.5 |
109.4 |
| C2 |
P1 |
O15 |
102.6 |
109.4 |
| P1 |
C2 |
H3 |
108.5 |
109.5 |
| O15 |
P1 |
O16 |
115.4 |
109.5 |
| P1 |
O16 |
H5 |
109.5 |
114.0 |
| P1 |
O15 |
H4 |
109.5 |
114.0 |
| H6 |
C4 |
H7 |
109.5 |
109.4 |
| H10 |
C6 |
H11 |
109.5 |
109.5 |
| H12 |
C7 |
H13 |
109.5 |
109.4 |
| H14 |
C8 |
H15 |
109.5 |
109.5 |
| H16 |
C9 |
H17 |
109.4 |
109.4 |
| H18 |
C10 |
H19 |
109.5 |
109.4 |
| H18 |
C10 |
H20 |
109.5 |
109.4 |
| H19 |
C10 |
H20 |
109.5 |
109.5 |
Torsion Angles for 0M7
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C10 |
C9 |
C8 |
H14 |
22.1 |
60.0 |
| C10 |
C9 |
C8 |
H15 |
142.1 |
300.0 |
| C8 |
C9 |
C10 |
H16 |
240.1 |
120.0 |
| C8 |
C9 |
C10 |
H17 |
119.9 |
240.0 |
| H16 |
C9 |
C10 |
H17 |
239.8 |
120.0 |
| C10 |
C9 |
C8 |
H16 |
119.9 |
239.9 |
| C10 |
C9 |
C8 |
H17 |
240.1 |
120.0 |
| C9 |
C8 |
C7 |
H12 |
217.2 |
60.0 |
| C9 |
C8 |
C7 |
H13 |
336.8 |
300.0 |
| H14 |
C8 |
C9 |
H15 |
240.0 |
120.0 |
| H16 |
C9 |
C8 |
H17 |
120.2 |
240.1 |
| C8 |
C7 |
C6 |
H10 |
271.1 |
60.0 |
| C8 |
C7 |
C6 |
H11 |
31.0 |
299.9 |
| H12 |
C7 |
C8 |
H13 |
240.3 |
120.0 |
| C7 |
C6 |
N5 |
H8 |
57.9 |
304.0 |
| H10 |
C6 |
C7 |
H11 |
240.1 |
120.1 |
| C6 |
N5 |
C4 |
H6 |
289.8 |
60.0 |
| C6 |
N5 |
C4 |
H7 |
50.7 |
300.0 |
| C4 |
N5 |
C6 |
H8 |
238.6 |
236.0 |
| O12 |
P3 |
O13 |
C2 |
111.3 |
120.1 |
| O13 |
P3 |
C2 |
P1 |
299.1 |
180.0 |
| O13 |
P3 |
C2 |
H3 |
178.5 |
60.0 |
| O13 |
P3 |
O11 |
H1 |
0.0 |
300.0 |
| O13 |
P3 |
O12 |
C2 |
245.4 |
239.9 |
| O12 |
P3 |
C2 |
P1 |
178.7 |
60.0 |
| O12 |
P3 |
C2 |
H3 |
58.1 |
300.0 |
| O12 |
P3 |
O11 |
H1 |
132.1 |
60.0 |
| C6 |
N5 |
C4 |
H8 |
121.4 |
124.0 |
| N5 |
C4 |
C2 |
H3 |
20.1 |
180.0 |
| H6 |
C4 |
N5 |
H7 |
239.0 |
120.0 |
| P3 |
C2 |
C4 |
H3 |
117.3 |
120.0 |
| P1 |
C2 |
C4 |
H3 |
239.0 |
240.0 |
| C4 |
C2 |
P3 |
H3 |
240.1 |
240.0 |
| C2 |
P3 |
O11 |
H1 |
242.2 |
180.0 |
| P3 |
C2 |
P1 |
O16 |
181.8 |
300.0 |
| P3 |
C2 |
P1 |
O15 |
303.9 |
60.0 |
| P1 |
C2 |
P3 |
H3 |
120.6 |
120.0 |
| C2 |
P1 |
O14 |
O16 |
114.7 |
120.0 |
| O14 |
P1 |
C2 |
H3 |
184.9 |
300.0 |
| O15 |
P1 |
O14 |
O16 |
225.3 |
239.9 |
| O14 |
P1 |
O16 |
H5 |
0.0 |
300.0 |
| O14 |
P1 |
O15 |
H4 |
360.0 |
180.0 |
| C4 |
C2 |
P1 |
H3 |
123.2 |
120.0 |
| P3 |
C2 |
P1 |
H3 |
239.3 |
240.0 |
| O14 |
P1 |
C2 |
O16 |
242.4 |
240.0 |
| O15 |
P1 |
C2 |
O16 |
122.1 |
120.0 |
| C2 |
P1 |
O16 |
H5 |
248.7 |
180.0 |
| C2 |
P1 |
O15 |
H4 |
110.4 |
300.0 |
| C2 |
P1 |
O16 |
O15 |
113.8 |
120.0 |
| O16 |
P1 |
C2 |
H3 |
302.5 |
60.0 |
| O16 |
P1 |
O15 |
H4 |
227.0 |
60.0 |
| O14 |
P1 |
O15 |
O16 |
133.0 |
120.0 |
| C2 |
P1 |
O15 |
O16 |
243.4 |
240.0 |
| O15 |
P1 |
C2 |
H3 |
64.6 |
180.0 |
| O15 |
P1 |
O16 |
H5 |
134.9 |
60.0 |
| H2 |
O12 |
P3 |
C2 |
114.6 |
300.0 |
| P3 |
C2 |
H3 |
P1 |
123.5 |
120.0 |
| H3 |
C2 |
P1 |
O16 |
302.5 |
60.0 |
| H3 |
C2 |
P1 |
O15 |
64.6 |
180.0 |
| H4 |
O15 |
P1 |
O16 |
227.0 |
60.0 |
| N5 |
C4 |
H6 |
H7 |
121.4 |
240.0 |
| H6 |
C4 |
N5 |
H8 |
168.4 |
296.0 |
| H6 |
C4 |
C2 |
H3 |
260.6 |
300.0 |
| N5 |
C4 |
H7 |
H6 |
238.6 |
120.0 |
| H7 |
C4 |
N5 |
H8 |
289.4 |
176.0 |
| H7 |
C4 |
C2 |
H3 |
139.6 |
60.0 |
| H8 |
N5 |
C4 |
H6 |
168.4 |
296.0 |
| H8 |
N5 |
C4 |
H7 |
289.4 |
176.0 |
| C7 |
C6 |
H10 |
H11 |
119.9 |
240.0 |
| H10 |
C6 |
N5 |
H8 |
297.8 |
64.0 |
| C7 |
C6 |
H11 |
H10 |
240.1 |
120.0 |
| H11 |
C6 |
N5 |
H8 |
177.9 |
184.0 |
| C8 |
C7 |
H12 |
H13 |
119.5 |
240.0 |
| H12 |
C7 |
C6 |
H10 |
150.9 |
180.0 |
| H12 |
C7 |
C6 |
H11 |
270.9 |
60.0 |
| C8 |
C7 |
H13 |
H12 |
240.5 |
120.0 |
| H13 |
C7 |
C6 |
H10 |
31.3 |
300.0 |
| H13 |
C7 |
C6 |
H11 |
151.2 |
179.9 |
| C9 |
C8 |
H14 |
H15 |
120.1 |
240.0 |
| H14 |
C8 |
C9 |
H16 |
262.1 |
180.0 |
| H14 |
C8 |
C9 |
H17 |
141.9 |
300.0 |
| H14 |
C8 |
C7 |
H12 |
97.2 |
179.9 |
| H14 |
C8 |
C7 |
H13 |
216.9 |
60.0 |
| C9 |
C8 |
H15 |
H14 |
239.9 |
119.9 |
| H15 |
C8 |
C9 |
H16 |
22.2 |
60.1 |
| H15 |
C8 |
C9 |
H17 |
262.0 |
180.0 |
| H15 |
C8 |
C7 |
H12 |
337.2 |
300.0 |
| H15 |
C8 |
C7 |
H13 |
96.8 |
180.0 |
| C10 |
C9 |
H16 |
H17 |
120.3 |
240.0 |
| H16 |
C9 |
C8 |
H14 |
262.1 |
180.0 |
| H16 |
C9 |
C8 |
H15 |
22.2 |
60.1 |
| C8 |
C9 |
H16 |
H17 |
239.6 |
119.9 |
| C10 |
C9 |
H17 |
H16 |
239.7 |
120.0 |
| H17 |
C9 |
C8 |
H14 |
141.9 |
300.0 |
| H17 |
C9 |
C8 |
H15 |
262.0 |
180.0 |
| C8 |
C9 |
H17 |
H16 |
120.4 |
240.1 |
| H18 |
C10 |
C9 |
H16 |
299.9 |
180.0 |
| H18 |
C10 |
C9 |
H17 |
60.1 |
60.0 |
| H19 |
C10 |
H18 |
H20 |
120.0 |
119.9 |
| H19 |
C10 |
C9 |
H16 |
59.9 |
300.0 |
| H19 |
C10 |
C9 |
H17 |
180.1 |
180.0 |
| H18 |
C10 |
H19 |
H20 |
240.0 |
240.1 |
| H20 |
C10 |
C9 |
H16 |
179.9 |
60.0 |
| H20 |
C10 |
C9 |
H17 |
300.1 |
300.0 |
| H18 |
C10 |
H20 |
H19 |
120.0 |
119.9 |