PDB Chemical Component 0KO
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0KO
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O33 |
S16 |
1.502 |
1.421 |
| C32 |
S16 |
1.784 |
1.814 |
| S16 |
O34 |
1.511 |
1.422 |
| S16 |
N13 |
1.640 |
1.656 |
| C14 |
N13 |
1.483 |
1.471 |
| C14 |
C15 |
1.533 |
1.532 |
| N13 |
C12 |
1.478 |
1.470 |
| C12 |
C11 |
1.527 |
1.532 |
| C15 |
N10 |
1.474 |
1.468 |
| C28 |
C29 |
1.390 |
1.383 |
| C28 |
C27 |
1.395 |
1.389 |
| O30 |
C27 |
1.363 |
1.357 |
| O30 |
C31 |
1.435 |
1.429 |
| C29 |
C24 |
1.400 |
1.395 |
| N10 |
C11 |
1.474 |
1.469 |
| N10 |
C9 |
1.466 |
1.469 |
| C27 |
N26 |
1.349 |
1.322 |
| C6 |
N1 |
1.322 |
1.319 |
| C6 |
C5 |
1.394 |
1.382 |
| N1 |
C2 |
1.352 |
1.324 |
| C9 |
C5 |
1.528 |
1.507 |
| C24 |
N7 |
1.333 |
1.401 |
| C24 |
C25 |
1.393 |
1.387 |
| N26 |
C25 |
1.324 |
1.319 |
| C5 |
C4 |
1.397 |
1.384 |
| C2 |
N7 |
1.337 |
1.386 |
| C2 |
C3 |
1.393 |
1.403 |
| C4 |
C3 |
1.391 |
1.397 |
| C3 |
C8 |
1.393 |
1.479 |
| C8 |
N21 |
1.343 |
1.330 |
| C8 |
N17 |
1.342 |
1.333 |
| N21 |
C20 |
1.344 |
1.328 |
| N17 |
C18 |
1.338 |
1.321 |
| C20 |
N23 |
1.329 |
1.380 |
| C20 |
N19 |
1.338 |
1.331 |
| C18 |
N19 |
1.341 |
1.321 |
| C18 |
C22 |
1.522 |
1.507 |
| C31 |
H1 |
1.100 |
1.090 |
| C31 |
H2 |
1.100 |
1.090 |
| C31 |
H3 |
1.100 |
1.090 |
| C28 |
H4 |
1.080 |
1.080 |
| C29 |
H5 |
1.080 |
1.080 |
| C25 |
H6 |
1.080 |
1.080 |
| N7 |
H7 |
1.000 |
0.970 |
| C6 |
H8 |
1.080 |
1.081 |
| C9 |
H9 |
1.100 |
1.091 |
| C9 |
H10 |
1.100 |
1.090 |
| C15 |
H12 |
1.100 |
1.091 |
| C15 |
H13 |
1.100 |
1.090 |
| C14 |
H14 |
1.100 |
1.089 |
| C14 |
H15 |
1.100 |
1.090 |
| C11 |
H16 |
1.100 |
1.090 |
| C11 |
H17 |
1.100 |
1.090 |
| C12 |
H18 |
1.100 |
1.090 |
| C12 |
H19 |
1.100 |
1.090 |
| C32 |
H20 |
1.100 |
1.089 |
| C32 |
H21 |
1.099 |
1.089 |
| C32 |
H22 |
1.100 |
1.090 |
| C4 |
H23 |
1.080 |
1.080 |
| C22 |
H24 |
1.100 |
1.089 |
| C22 |
H25 |
1.100 |
1.090 |
| C22 |
H26 |
1.100 |
1.090 |
| N23 |
H27 |
1.001 |
0.969 |
| N23 |
H28 |
1.000 |
0.971 |
Bond Angles for 0KO
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C32 |
S16 |
O34 |
109.0 |
110.6 |
| C14 |
N13 |
C12 |
113.6 |
118.2 |
| N13 |
C14 |
H14 |
109.3 |
109.7 |
| N13 |
C14 |
H15 |
109.3 |
109.6 |
| C14 |
C15 |
H12 |
109.9 |
109.4 |
| C14 |
C15 |
H13 |
109.9 |
109.5 |
| N13 |
C12 |
H18 |
109.7 |
109.6 |
| N13 |
C12 |
H19 |
109.7 |
109.7 |
| C12 |
C11 |
H16 |
110.1 |
109.5 |
| C12 |
C11 |
H17 |
110.1 |
109.5 |
| C15 |
N10 |
C11 |
111.0 |
111.3 |
| C28 |
C29 |
C24 |
118.8 |
118.4 |
| C29 |
C28 |
H4 |
120.5 |
120.4 |
| C28 |
C29 |
H5 |
120.6 |
120.8 |
| C28 |
C27 |
N26 |
120.4 |
120.8 |
| O30 |
C27 |
N26 |
121.0 |
119.6 |
| O30 |
C31 |
H1 |
109.5 |
109.5 |
| O30 |
C31 |
H2 |
109.5 |
109.5 |
| O30 |
C31 |
H3 |
109.5 |
109.5 |
| C29 |
C24 |
N7 |
121.7 |
120.4 |
| C29 |
C24 |
C25 |
119.4 |
119.2 |
| C24 |
C29 |
H5 |
120.6 |
120.8 |
| N10 |
C11 |
H16 |
110.1 |
109.5 |
| N10 |
C11 |
H17 |
110.1 |
109.5 |
| N10 |
C9 |
H9 |
110.0 |
109.5 |
| N10 |
C9 |
H10 |
110.0 |
109.4 |
| C27 |
N26 |
C25 |
121.7 |
121.7 |
| C6 |
C5 |
C4 |
119.9 |
119.5 |
| C5 |
C6 |
H8 |
120.2 |
119.4 |
| N1 |
C2 |
C3 |
120.3 |
120.4 |
| C9 |
C5 |
C4 |
120.5 |
120.3 |
| C24 |
N7 |
H7 |
118.2 |
120.0 |
| C24 |
C25 |
H6 |
119.7 |
119.6 |
| N26 |
C25 |
H6 |
119.7 |
119.7 |
| C5 |
C4 |
C3 |
118.9 |
118.4 |
| C5 |
C4 |
H23 |
120.5 |
120.8 |
| C2 |
N7 |
H7 |
118.2 |
120.0 |
| C2 |
C3 |
C4 |
118.8 |
118.8 |
| C2 |
C3 |
C8 |
120.3 |
120.6 |
| C4 |
C3 |
C8 |
120.9 |
120.6 |
| C3 |
C4 |
H23 |
120.5 |
120.8 |
| C3 |
C8 |
N21 |
122.1 |
120.1 |
| C3 |
C8 |
N17 |
118.8 |
120.1 |
| N21 |
C8 |
N17 |
119.1 |
119.8 |
| C8 |
N21 |
C20 |
120.4 |
119.8 |
| C8 |
N17 |
C18 |
120.5 |
120.1 |
| N21 |
C20 |
N23 |
120.4 |
120.0 |
| N21 |
C20 |
N19 |
120.1 |
119.9 |
| N17 |
C18 |
N19 |
120.2 |
120.2 |
| N17 |
C18 |
C22 |
119.1 |
119.9 |
| C20 |
N23 |
H27 |
109.5 |
120.0 |
| C20 |
N23 |
H28 |
109.5 |
120.0 |
| C22 |
C18 |
N19 |
120.7 |
119.9 |
| C18 |
C22 |
H24 |
109.5 |
109.5 |
| C18 |
C22 |
H25 |
109.5 |
109.5 |
| C18 |
C22 |
H26 |
109.5 |
109.5 |
| H1 |
C31 |
H2 |
109.5 |
109.5 |
| H1 |
C31 |
H3 |
109.4 |
109.5 |
| H2 |
C31 |
H3 |
109.5 |
109.4 |
| H9 |
C9 |
H10 |
109.5 |
109.4 |
| H12 |
C15 |
H13 |
109.5 |
109.5 |
| H14 |
C14 |
H15 |
109.5 |
109.7 |
| H16 |
C11 |
H17 |
109.5 |
109.5 |
| H18 |
C12 |
H19 |
109.5 |
109.7 |
| H20 |
C32 |
H21 |
109.5 |
109.5 |
| H20 |
C32 |
H22 |
109.4 |
109.4 |
| H21 |
C32 |
H22 |
109.5 |
109.5 |
| H24 |
C22 |
H25 |
109.4 |
109.5 |
| H24 |
C22 |
H26 |
109.5 |
109.5 |
| H25 |
C22 |
H26 |
109.5 |
109.4 |
| H27 |
N23 |
H28 |
109.4 |
120.0 |
Torsion Angles for 0KO
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| S16 |
N13 |
C14 |
H14 |
302.7 |
9.1 |
| S16 |
N13 |
C14 |
H15 |
62.5 |
248.6 |
| S16 |
N13 |
C12 |
H18 |
299.2 |
111.4 |
| S16 |
N13 |
C12 |
H19 |
59.4 |
350.9 |
| N13 |
C14 |
C15 |
H12 |
174.6 |
293.8 |
| N13 |
C14 |
C15 |
H13 |
295.1 |
173.8 |
| C14 |
N13 |
C12 |
H18 |
176.2 |
291.5 |
| C14 |
N13 |
C12 |
H19 |
296.5 |
170.9 |
| H14 |
C14 |
N13 |
H15 |
240.2 |
120.5 |
| C14 |
C15 |
N10 |
C11 |
296.6 |
297.0 |
| H12 |
C15 |
C14 |
H13 |
239.4 |
120.0 |
| C12 |
N13 |
C14 |
H14 |
66.2 |
189.1 |
| C12 |
N13 |
C14 |
H15 |
186.0 |
68.6 |
| N13 |
C12 |
C11 |
H16 |
59.3 |
186.2 |
| N13 |
C12 |
C11 |
H17 |
180.2 |
66.1 |
| H18 |
C12 |
N13 |
H19 |
239.7 |
120.5 |
| C14 |
N13 |
C12 |
C11 |
56.4 |
51.2 |
| N10 |
C11 |
C12 |
H16 |
240.4 |
120.0 |
| N10 |
C11 |
C12 |
H17 |
119.6 |
240.0 |
| H16 |
C11 |
C12 |
H17 |
239.2 |
120.1 |
| C15 |
N10 |
C11 |
H16 |
306.9 |
183.1 |
| C15 |
N10 |
C11 |
H17 |
186.0 |
303.1 |
| C15 |
N10 |
C9 |
H9 |
350.9 |
174.3 |
| C15 |
N10 |
C9 |
H10 |
111.5 |
54.4 |
| C29 |
C28 |
C27 |
N26 |
359.8 |
0.2 |
| C28 |
C29 |
C24 |
N7 |
180.0 |
180.0 |
| C28 |
C29 |
C24 |
C25 |
359.2 |
359.7 |
| C24 |
C29 |
C28 |
H5 |
180.0 |
180.0 |
| O30 |
C27 |
C28 |
N26 |
179.7 |
179.7 |
| C28 |
C27 |
N26 |
C25 |
359.8 |
359.8 |
| C28 |
C27 |
O30 |
N26 |
180.3 |
180.3 |
| C27 |
O30 |
C31 |
H1 |
180.0 |
60.0 |
| C27 |
O30 |
C31 |
H2 |
300.0 |
180.0 |
| C27 |
O30 |
C31 |
H3 |
60.0 |
300.0 |
| O30 |
C27 |
N26 |
C25 |
180.1 |
180.0 |
| H1 |
C31 |
O30 |
H2 |
240.0 |
240.0 |
| H1 |
C31 |
O30 |
H3 |
120.0 |
120.0 |
| H2 |
C31 |
O30 |
H3 |
240.0 |
240.0 |
| C24 |
C29 |
C28 |
H4 |
180.7 |
180.0 |
| C28 |
C29 |
C24 |
H5 |
180.0 |
180.0 |
| C29 |
C24 |
N7 |
H7 |
135.4 |
11.5 |
| C29 |
C24 |
C25 |
H6 |
180.4 |
180.3 |
| C12 |
C11 |
N10 |
H16 |
119.6 |
240.0 |
| C12 |
C11 |
N10 |
H17 |
240.4 |
120.0 |
| C11 |
N10 |
C9 |
H9 |
227.8 |
49.9 |
| C11 |
N10 |
C9 |
H10 |
348.5 |
290.0 |
| H16 |
C11 |
N10 |
H17 |
120.8 |
240.0 |
| N10 |
C9 |
C5 |
C4 |
266.8 |
270.0 |
| H9 |
C9 |
N10 |
H10 |
239.3 |
119.9 |
| C27 |
N26 |
C25 |
H6 |
180.1 |
180.0 |
| C6 |
N1 |
C2 |
C3 |
359.9 |
0.2 |
| C9 |
C5 |
C6 |
C4 |
180.2 |
180.0 |
| C6 |
C5 |
C4 |
C3 |
359.8 |
359.8 |
| C6 |
C5 |
C4 |
H23 |
179.8 |
180.0 |
| N1 |
C2 |
N7 |
H7 |
171.6 |
173.7 |
| N1 |
C2 |
C3 |
C4 |
359.3 |
359.6 |
| N1 |
C2 |
C3 |
C8 |
181.4 |
179.7 |
| C6 |
C5 |
C9 |
C4 |
179.8 |
180.0 |
| C9 |
C5 |
C6 |
H8 |
359.6 |
0.0 |
| C9 |
C5 |
C4 |
C3 |
179.6 |
179.7 |
| C9 |
C5 |
C4 |
H23 |
359.6 |
359.9 |
| C29 |
C24 |
N7 |
C25 |
179.2 |
179.7 |
| N7 |
C24 |
C29 |
H5 |
360.0 |
0.1 |
| N7 |
C24 |
C25 |
H6 |
359.7 |
359.9 |
| C2 |
N7 |
C24 |
H7 |
180.0 |
180.1 |
| C29 |
C24 |
C25 |
N7 |
180.8 |
180.3 |
| C25 |
C24 |
C29 |
H5 |
179.2 |
179.7 |
| N26 |
C25 |
C24 |
H6 |
180.0 |
180.1 |
| C29 |
C24 |
C25 |
N26 |
0.4 |
0.3 |
| C24 |
C25 |
N26 |
H6 |
180.0 |
179.9 |
| C4 |
C5 |
C6 |
H8 |
179.4 |
180.0 |
| C2 |
C3 |
C4 |
C5 |
0.8 |
0.5 |
| C5 |
C4 |
C3 |
C8 |
178.7 |
180.3 |
| C3 |
C4 |
C5 |
H23 |
180.0 |
179.8 |
| C24 |
N7 |
C2 |
H7 |
180.0 |
179.9 |
| C5 |
C4 |
C3 |
C2 |
0.8 |
0.5 |
| C3 |
C2 |
N7 |
H7 |
351.3 |
353.5 |
| C4 |
C3 |
C2 |
C8 |
177.9 |
179.8 |
| C2 |
C3 |
C4 |
H23 |
180.8 |
180.3 |
| C2 |
C3 |
C8 |
N21 |
192.4 |
356.9 |
| C2 |
C3 |
C8 |
N17 |
14.4 |
176.6 |
| C5 |
C4 |
C3 |
H23 |
180.0 |
180.2 |
| C2 |
C3 |
C4 |
C8 |
182.1 |
180.2 |
| C4 |
C3 |
C8 |
N21 |
14.5 |
177.1 |
| C4 |
C3 |
C8 |
N17 |
196.5 |
356.8 |
| C2 |
C3 |
C8 |
C4 |
177.9 |
179.8 |
| C8 |
C3 |
C4 |
H23 |
358.7 |
0.1 |
| N21 |
C8 |
C3 |
N17 |
178.0 |
180.3 |
| C3 |
C8 |
N21 |
C20 |
181.3 |
180.0 |
| C3 |
C8 |
N17 |
C18 |
179.0 |
180.0 |
| C3 |
C8 |
N21 |
N17 |
182.1 |
179.7 |
| N21 |
C8 |
N17 |
C18 |
1.0 |
359.7 |
| C8 |
N21 |
C20 |
N23 |
180.2 |
179.9 |
| C8 |
N21 |
C20 |
N19 |
360.0 |
359.9 |
| C3 |
C8 |
N17 |
N21 |
178.0 |
180.3 |
| N17 |
C8 |
N21 |
C20 |
359.2 |
0.3 |
| C8 |
N17 |
C18 |
N19 |
359.6 |
0.0 |
| C8 |
N17 |
C18 |
C22 |
179.8 |
180.0 |
| C20 |
N21 |
C8 |
N17 |
359.2 |
0.3 |
| N21 |
C20 |
N23 |
H27 |
0.0 |
360.0 |
| N21 |
C20 |
N23 |
H28 |
120.0 |
179.9 |
| C22 |
C18 |
N17 |
N19 |
180.2 |
180.0 |
| N17 |
C18 |
C22 |
H24 |
0.0 |
90.0 |
| N17 |
C18 |
C22 |
H25 |
120.0 |
210.1 |
| N17 |
C18 |
C22 |
H26 |
240.0 |
330.0 |
| N21 |
C20 |
N23 |
N19 |
179.7 |
180.0 |
| H27 |
N23 |
C20 |
H28 |
240.0 |
180.1 |
| N21 |
C20 |
N19 |
N23 |
180.3 |
180.0 |
| N21 |
C20 |
N19 |
C18 |
0.6 |
359.8 |
| N17 |
C18 |
N19 |
C22 |
180.3 |
180.0 |
| N19 |
C18 |
C22 |
H24 |
180.3 |
270.0 |
| N19 |
C18 |
C22 |
H25 |
300.2 |
30.0 |
| N19 |
C18 |
C22 |
H26 |
60.2 |
150.0 |
| N17 |
C18 |
C22 |
N19 |
179.8 |
180.0 |
| H24 |
C22 |
C18 |
H25 |
240.0 |
239.9 |
| H24 |
C22 |
C18 |
H26 |
120.0 |
120.0 |
| H25 |
C22 |
C18 |
H26 |
240.0 |
240.1 |
| O30 |
C31 |
H1 |
H2 |
120.0 |
120.0 |
| O30 |
C31 |
H1 |
H3 |
240.0 |
240.0 |
| H2 |
C31 |
H1 |
H3 |
120.0 |
119.9 |
| O30 |
C31 |
H2 |
H1 |
240.0 |
240.0 |
| O30 |
C31 |
H2 |
H3 |
120.0 |
120.0 |
| H1 |
C31 |
H2 |
H3 |
240.0 |
240.0 |
| O30 |
C31 |
H3 |
H1 |
120.0 |
120.0 |
| O30 |
C31 |
H3 |
H2 |
240.0 |
240.0 |
| H1 |
C31 |
H3 |
H2 |
120.0 |
120.0 |
| H4 |
C28 |
C29 |
C24 |
180.7 |
180.0 |
| H4 |
C28 |
C29 |
H5 |
0.7 |
360.0 |
| H4 |
C28 |
C27 |
N26 |
179.8 |
180.2 |
| C28 |
C29 |
H5 |
C24 |
180.0 |
180.0 |
| H5 |
C29 |
C28 |
H4 |
0.7 |
360.0 |
| H5 |
C29 |
C24 |
N7 |
360.0 |
0.1 |
| H5 |
C29 |
C24 |
C25 |
179.2 |
179.7 |
| H8 |
C6 |
C5 |
C4 |
179.4 |
180.0 |
| N10 |
C9 |
H9 |
H10 |
121.0 |
240.1 |
| H9 |
C9 |
C5 |
C4 |
147.1 |
30.1 |
| N10 |
C9 |
H10 |
H9 |
239.0 |
119.9 |
| H10 |
C9 |
C5 |
C4 |
26.4 |
150.0 |
| C14 |
C15 |
H12 |
H13 |
120.9 |
240.0 |
| H12 |
C15 |
N10 |
C11 |
176.9 |
56.9 |
| C14 |
C15 |
H13 |
H12 |
239.1 |
120.0 |
| H13 |
C15 |
N10 |
C11 |
56.4 |
176.9 |
| H14 |
C14 |
N13 |
C12 |
66.2 |
189.1 |
| N13 |
C14 |
H14 |
H15 |
119.7 |
239.6 |
| H14 |
C14 |
C15 |
H12 |
54.5 |
53.6 |
| H14 |
C14 |
C15 |
H13 |
175.0 |
293.6 |
| H15 |
C14 |
N13 |
C12 |
186.0 |
68.6 |
| N13 |
C14 |
H15 |
H14 |
240.4 |
120.5 |
| H15 |
C14 |
C15 |
H12 |
294.7 |
174.2 |
| H15 |
C14 |
C15 |
H13 |
55.3 |
54.2 |
| C12 |
C11 |
H16 |
H17 |
121.2 |
239.9 |
| N10 |
C11 |
H16 |
H17 |
238.8 |
120.0 |
| C12 |
C11 |
H17 |
H16 |
238.8 |
120.1 |
| N10 |
C11 |
H17 |
H16 |
121.2 |
240.0 |
| N13 |
C12 |
H18 |
H19 |
120.4 |
239.4 |
| H18 |
C12 |
C11 |
H16 |
299.5 |
305.9 |
| H18 |
C12 |
C11 |
H17 |
60.3 |
185.8 |
| N13 |
C12 |
H19 |
H18 |
239.6 |
120.5 |
| H19 |
C12 |
C11 |
H16 |
179.2 |
66.3 |
| H19 |
C12 |
C11 |
H17 |
300.0 |
306.3 |
| H20 |
C32 |
S16 |
O34 |
60.6 |
68.3 |
| H21 |
C32 |
H20 |
H22 |
120.0 |
120.0 |
| H21 |
C32 |
S16 |
O34 |
180.5 |
188.4 |
| H20 |
C32 |
H21 |
H22 |
240.0 |
240.0 |
| H22 |
C32 |
S16 |
O34 |
300.6 |
308.4 |
| H20 |
C32 |
H22 |
H21 |
120.0 |
120.0 |
| C5 |
C4 |
H23 |
C3 |
180.0 |
179.8 |
| H23 |
C4 |
C3 |
C8 |
358.7 |
0.1 |
| H24 |
C22 |
C18 |
N19 |
180.3 |
270.0 |
| C18 |
C22 |
H24 |
H25 |
120.0 |
120.1 |
| C18 |
C22 |
H24 |
H26 |
240.0 |
240.0 |
| H25 |
C22 |
H24 |
H26 |
120.0 |
120.0 |
| H25 |
C22 |
C18 |
N19 |
300.2 |
30.0 |
| C18 |
C22 |
H25 |
H24 |
240.0 |
240.0 |
| C18 |
C22 |
H25 |
H26 |
120.0 |
120.0 |
| H24 |
C22 |
H25 |
H26 |
240.0 |
240.0 |
| H26 |
C22 |
C18 |
N19 |
60.2 |
150.0 |
| C18 |
C22 |
H26 |
H24 |
120.0 |
120.0 |
| C18 |
C22 |
H26 |
H25 |
240.0 |
240.0 |
| H24 |
C22 |
H26 |
H25 |
120.0 |
120.0 |
| C20 |
N23 |
H27 |
H28 |
120.0 |
179.9 |
| C20 |
N23 |
H28 |
H27 |
240.0 |
180.1 |