PDB Chemical Component 0KM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0KM
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C13 |
C14 |
1.382 |
1.379 |
C13 |
C12 |
1.387 |
1.383 |
C14 |
C15 |
1.399 |
1.394 |
C12 |
C11 |
1.393 |
1.384 |
C15 |
C19 |
1.488 |
1.484 |
C15 |
C16 |
1.400 |
1.393 |
C20 |
C19 |
1.397 |
1.393 |
C20 |
C21 |
1.391 |
1.380 |
C8 |
C9 |
1.382 |
1.382 |
C8 |
C7 |
1.376 |
1.383 |
C9 |
C10 |
1.393 |
1.382 |
C7 |
C6 |
1.394 |
1.382 |
C19 |
C18 |
1.396 |
1.393 |
C11 |
C16 |
1.395 |
1.379 |
C11 |
C2 |
1.540 |
1.506 |
C21 |
C17 |
1.387 |
1.382 |
C10 |
C5 |
1.394 |
1.382 |
C6 |
C5 |
1.392 |
1.382 |
C5 |
C2 |
1.542 |
1.507 |
C18 |
C22 |
1.390 |
1.386 |
C17 |
C22 |
1.391 |
1.389 |
C2 |
N1 |
1.501 |
1.472 |
C2 |
C1 |
1.576 |
1.514 |
C22 |
O2 |
1.374 |
1.359 |
O1 |
C1 |
1.215 |
1.212 |
N1 |
C3 |
1.343 |
1.373 |
C1 |
N2 |
1.376 |
1.347 |
O2 |
C23 |
1.436 |
1.430 |
C3 |
N2 |
1.424 |
1.373 |
C3 |
N3 |
1.332 |
1.301 |
N2 |
C4 |
1.468 |
1.465 |
N3 |
H1 |
1.000 |
0.970 |
C4 |
H3 |
1.100 |
1.090 |
C4 |
H4 |
1.100 |
1.090 |
C4 |
H5 |
1.100 |
1.091 |
C6 |
H6 |
1.080 |
1.079 |
C7 |
H7 |
1.080 |
1.080 |
C8 |
H8 |
1.080 |
1.079 |
C9 |
H9 |
1.080 |
1.080 |
C10 |
H10 |
1.079 |
1.080 |
C12 |
H11 |
1.080 |
1.080 |
C13 |
H12 |
1.080 |
1.081 |
C14 |
H13 |
1.080 |
1.080 |
C16 |
H14 |
1.080 |
1.080 |
C17 |
H15 |
1.079 |
1.080 |
C18 |
H16 |
1.080 |
1.080 |
C20 |
H17 |
1.080 |
1.080 |
C21 |
H18 |
1.079 |
1.081 |
C23 |
H19 |
1.100 |
1.090 |
C23 |
H20 |
1.100 |
1.090 |
C23 |
H21 |
1.100 |
1.090 |
N1 |
H22 |
1.000 |
0.971 |
Bond Angles for 0KM
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C13 |
C14 |
C15 |
120.5 |
119.9 |
C14 |
C13 |
H12 |
120.0 |
120.0 |
C13 |
C14 |
H13 |
119.7 |
120.1 |
C13 |
C12 |
H11 |
119.6 |
119.9 |
C14 |
C15 |
C19 |
121.3 |
120.1 |
C14 |
C15 |
C16 |
118.9 |
119.7 |
C15 |
C14 |
H13 |
119.7 |
120.0 |
C12 |
C11 |
C16 |
118.9 |
120.1 |
C16 |
C15 |
C19 |
119.8 |
120.1 |
C15 |
C19 |
C18 |
120.0 |
120.1 |
C11 |
C16 |
C15 |
120.8 |
119.9 |
C15 |
C16 |
H14 |
119.6 |
120.0 |
C21 |
C20 |
H17 |
119.6 |
120.0 |
C20 |
C21 |
H18 |
119.8 |
120.0 |
C8 |
C9 |
C10 |
120.3 |
120.0 |
C9 |
C8 |
H8 |
120.2 |
120.0 |
C8 |
C9 |
H9 |
119.9 |
120.0 |
C8 |
C7 |
H7 |
119.9 |
120.0 |
C10 |
C9 |
H9 |
119.9 |
120.0 |
C9 |
C10 |
H10 |
119.6 |
120.0 |
C7 |
C6 |
H6 |
119.6 |
120.0 |
C19 |
C18 |
C22 |
121.0 |
119.8 |
C19 |
C18 |
H16 |
119.5 |
120.1 |
C11 |
C16 |
H14 |
119.6 |
120.0 |
C21 |
C17 |
C22 |
119.2 |
120.2 |
C21 |
C17 |
H15 |
120.4 |
119.9 |
C17 |
C22 |
C18 |
120.3 |
120.0 |
C18 |
C22 |
O2 |
113.8 |
120.0 |
C22 |
C18 |
H16 |
119.5 |
120.1 |
C17 |
C22 |
O2 |
125.8 |
120.1 |
C22 |
C17 |
H15 |
120.4 |
119.9 |
C2 |
N1 |
C3 |
109.2 |
106.6 |
C2 |
N1 |
H22 |
125.4 |
126.7 |
C2 |
C1 |
N2 |
107.8 |
106.5 |
C22 |
O2 |
C23 |
117.9 |
117.0 |
O1 |
C1 |
N2 |
125.9 |
126.8 |
N1 |
C3 |
N2 |
112.5 |
111.2 |
N1 |
C3 |
N3 |
125.2 |
124.4 |
C3 |
N1 |
H22 |
125.4 |
126.7 |
C1 |
N2 |
C3 |
108.8 |
111.3 |
C1 |
N2 |
C4 |
123.8 |
124.3 |
O2 |
C23 |
H19 |
109.5 |
109.5 |
O2 |
C23 |
H20 |
109.5 |
109.5 |
O2 |
C23 |
H21 |
109.5 |
109.4 |
N2 |
C3 |
N3 |
122.3 |
124.4 |
C3 |
N2 |
C4 |
127.4 |
124.4 |
C3 |
N3 |
H1 |
112.0 |
120.0 |
N2 |
C4 |
H3 |
109.5 |
109.5 |
N2 |
C4 |
H4 |
109.5 |
109.5 |
N2 |
C4 |
H5 |
109.5 |
109.5 |
H3 |
C4 |
H4 |
109.4 |
109.5 |
H3 |
C4 |
H5 |
109.5 |
109.5 |
H4 |
C4 |
H5 |
109.5 |
109.5 |
H19 |
C23 |
H20 |
109.5 |
109.5 |
H19 |
C23 |
H21 |
109.5 |
109.4 |
H20 |
C23 |
H21 |
109.5 |
109.5 |
Torsion Angles for 0KM
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C14 |
C13 |
C12 |
H11 |
180.7 |
180.0 |
C13 |
C14 |
C15 |
C19 |
179.7 |
180.0 |
C13 |
C14 |
C15 |
C16 |
359.1 |
360.0 |
C15 |
C14 |
C13 |
H13 |
180.0 |
180.1 |
C13 |
C12 |
C11 |
C16 |
357.9 |
359.9 |
C15 |
C14 |
C13 |
H12 |
180.8 |
180.0 |
C13 |
C14 |
C15 |
H13 |
180.0 |
179.9 |
C16 |
C15 |
C14 |
C19 |
179.4 |
180.0 |
C14 |
C15 |
C19 |
C18 |
214.8 |
360.0 |
C11 |
C16 |
C15 |
C14 |
359.4 |
360.0 |
C14 |
C15 |
C16 |
H14 |
179.4 |
180.3 |
C12 |
C11 |
C16 |
C15 |
2.1 |
0.0 |
C12 |
C11 |
C16 |
H14 |
182.1 |
179.7 |
C14 |
C15 |
C19 |
C16 |
179.4 |
180.0 |
C19 |
C15 |
C14 |
H13 |
359.7 |
0.1 |
C11 |
C16 |
C15 |
C19 |
178.8 |
180.0 |
C19 |
C15 |
C16 |
H14 |
358.8 |
0.3 |
C15 |
C19 |
C18 |
C22 |
189.5 |
180.0 |
C15 |
C19 |
C18 |
H16 |
9.6 |
360.0 |
C14 |
C15 |
C16 |
C19 |
180.6 |
180.0 |
C16 |
C15 |
C14 |
H13 |
179.1 |
180.0 |
C16 |
C15 |
C19 |
C18 |
35.4 |
180.0 |
C11 |
C16 |
C15 |
H14 |
180.0 |
179.7 |
C20 |
C19 |
C18 |
C22 |
2.8 |
0.6 |
C20 |
C19 |
C18 |
H16 |
182.8 |
180.6 |
C20 |
C21 |
C17 |
C22 |
2.0 |
0.0 |
C20 |
C21 |
C17 |
H15 |
182.0 |
179.7 |
C9 |
C8 |
C7 |
H7 |
180.5 |
180.0 |
C10 |
C9 |
C8 |
H9 |
180.0 |
179.8 |
C8 |
C9 |
C10 |
H10 |
179.3 |
179.9 |
C8 |
C7 |
C6 |
H6 |
179.7 |
180.0 |
C10 |
C9 |
C8 |
H8 |
179.9 |
180.0 |
C8 |
C9 |
C10 |
H9 |
180.0 |
180.2 |
C17 |
C22 |
C18 |
C19 |
359.2 |
360.0 |
C19 |
C18 |
C22 |
O2 |
177.6 |
180.0 |
C22 |
C18 |
C19 |
H16 |
180.0 |
180.0 |
C14 |
C15 |
C16 |
C11 |
359.4 |
360.0 |
C15 |
C16 |
C11 |
H14 |
180.0 |
180.3 |
C11 |
C2 |
N1 |
H22 |
300.0 |
298.7 |
C21 |
C17 |
C22 |
C18 |
358.4 |
359.7 |
C21 |
C17 |
C22 |
O2 |
180.2 |
179.7 |
C22 |
C17 |
C21 |
H15 |
180.0 |
180.3 |
C5 |
C2 |
N1 |
H22 |
68.0 |
61.3 |
C19 |
C18 |
C22 |
H16 |
180.0 |
180.0 |
C17 |
C22 |
C18 |
O2 |
181.6 |
179.9 |
C18 |
C22 |
C17 |
H15 |
178.4 |
180.0 |
C18 |
C22 |
O2 |
C23 |
188.6 |
179.9 |
C19 |
C18 |
C22 |
C17 |
359.2 |
360.0 |
C21 |
C17 |
C22 |
H15 |
180.0 |
179.7 |
C18 |
C22 |
C17 |
O2 |
178.2 |
180.1 |
C17 |
C22 |
C18 |
H16 |
179.2 |
180.0 |
C17 |
C22 |
O2 |
C23 |
6.9 |
360.0 |
N1 |
C2 |
C1 |
N2 |
356.2 |
0.3 |
C2 |
N1 |
C3 |
N2 |
354.4 |
359.7 |
C2 |
N1 |
C3 |
N3 |
177.6 |
180.0 |
C3 |
N1 |
C2 |
H22 |
180.0 |
180.0 |
O1 |
C1 |
C2 |
N2 |
176.8 |
179.8 |
C2 |
C1 |
N2 |
C3 |
0.8 |
359.6 |
C2 |
C1 |
N2 |
C4 |
180.6 |
179.7 |
C17 |
C22 |
O2 |
C18 |
178.3 |
180.1 |
O2 |
C22 |
C18 |
H16 |
357.6 |
0.0 |
O2 |
C22 |
C17 |
H15 |
0.2 |
360.0 |
C22 |
O2 |
C23 |
H19 |
180.0 |
180.0 |
C22 |
O2 |
C23 |
H20 |
300.0 |
300.0 |
C22 |
O2 |
C23 |
H21 |
60.0 |
60.0 |
C2 |
C1 |
O1 |
N2 |
183.8 |
180.3 |
O1 |
C1 |
N2 |
C3 |
184.0 |
179.8 |
O1 |
C1 |
N2 |
C4 |
3.9 |
359.9 |
C2 |
N1 |
C3 |
H22 |
180.0 |
180.0 |
C1 |
N2 |
C3 |
N1 |
3.0 |
0.5 |
N2 |
C3 |
N1 |
N3 |
176.8 |
179.8 |
N1 |
C3 |
N2 |
C4 |
183.2 |
180.3 |
N1 |
C3 |
N3 |
H1 |
176.5 |
180.0 |
N1 |
C3 |
N2 |
C1 |
3.0 |
0.5 |
C1 |
N2 |
C3 |
N3 |
179.9 |
180.2 |
C3 |
N2 |
C1 |
C4 |
180.2 |
179.8 |
C1 |
N2 |
C4 |
H3 |
180.0 |
90.0 |
C1 |
N2 |
C4 |
H4 |
300.0 |
210.0 |
C1 |
N2 |
C4 |
H5 |
60.0 |
330.0 |
H19 |
C23 |
O2 |
H20 |
240.0 |
240.0 |
H19 |
C23 |
O2 |
H21 |
120.0 |
119.9 |
H20 |
C23 |
O2 |
H21 |
240.0 |
240.0 |
N1 |
C3 |
N2 |
N3 |
183.1 |
180.2 |
N2 |
C3 |
N1 |
H22 |
174.4 |
179.7 |
C1 |
N2 |
C3 |
C4 |
179.8 |
180.2 |
N2 |
C3 |
N3 |
H1 |
360.0 |
0.2 |
C3 |
N2 |
C4 |
H3 |
359.8 |
270.2 |
C3 |
N2 |
C4 |
H4 |
119.8 |
30.2 |
C3 |
N2 |
C4 |
H5 |
239.8 |
150.2 |
N1 |
C3 |
N3 |
N2 |
176.5 |
179.7 |
N3 |
C3 |
N1 |
H22 |
357.6 |
359.9 |
N3 |
C3 |
N2 |
C4 |
0.1 |
0.1 |
C1 |
N2 |
C4 |
C3 |
180.2 |
179.8 |
C4 |
N2 |
C3 |
N3 |
0.1 |
0.1 |
H3 |
C4 |
N2 |
H4 |
240.0 |
240.0 |
H3 |
C4 |
N2 |
H5 |
120.0 |
120.0 |
H4 |
C4 |
N2 |
H5 |
240.0 |
240.0 |
N2 |
C4 |
H3 |
H4 |
120.0 |
120.0 |
N2 |
C4 |
H3 |
H5 |
240.0 |
240.0 |
H4 |
C4 |
H3 |
H5 |
120.0 |
120.0 |
N2 |
C4 |
H4 |
H3 |
240.0 |
240.0 |
N2 |
C4 |
H4 |
H5 |
120.0 |
120.0 |
H3 |
C4 |
H4 |
H5 |
240.0 |
240.0 |
N2 |
C4 |
H5 |
H3 |
120.0 |
120.0 |
N2 |
C4 |
H5 |
H4 |
240.0 |
240.0 |
H3 |
C4 |
H5 |
H4 |
120.0 |
120.0 |
H7 |
C7 |
C6 |
H6 |
359.7 |
359.9 |
H8 |
C8 |
C9 |
C10 |
179.9 |
180.0 |
H8 |
C8 |
C9 |
H9 |
360.0 |
0.2 |
H8 |
C8 |
C7 |
H7 |
0.5 |
359.8 |
C8 |
C9 |
H9 |
C10 |
180.0 |
179.8 |
H9 |
C9 |
C8 |
H8 |
360.0 |
0.2 |
H9 |
C9 |
C10 |
H10 |
359.3 |
359.7 |
H10 |
C10 |
C9 |
H9 |
359.3 |
359.7 |
H11 |
C12 |
C11 |
C16 |
177.9 |
179.9 |
H12 |
C13 |
C14 |
C15 |
180.8 |
180.0 |
H12 |
C13 |
C14 |
H13 |
0.8 |
360.0 |
H12 |
C13 |
C12 |
H11 |
0.7 |
0.0 |
C13 |
C14 |
H13 |
C15 |
180.0 |
180.1 |
H13 |
C14 |
C13 |
H12 |
0.8 |
360.0 |
H13 |
C14 |
C15 |
C19 |
359.7 |
0.1 |
H13 |
C14 |
C15 |
C16 |
179.1 |
180.0 |
H14 |
C16 |
C15 |
C19 |
358.8 |
0.3 |
C11 |
C16 |
H14 |
C15 |
180.0 |
180.3 |
C21 |
C17 |
H15 |
C22 |
180.0 |
180.3 |
H15 |
C17 |
C22 |
C18 |
178.4 |
180.0 |
H15 |
C17 |
C22 |
O2 |
0.2 |
360.0 |
C19 |
C18 |
H16 |
C22 |
180.0 |
180.0 |
H16 |
C18 |
C22 |
O2 |
357.6 |
0.0 |
H17 |
C20 |
C21 |
H18 |
0.1 |
0.3 |
H18 |
C21 |
C20 |
H17 |
0.1 |
0.3 |
H18 |
C21 |
C17 |
C22 |
182.0 |
180.0 |
H18 |
C21 |
C17 |
H15 |
2.0 |
359.7 |
O2 |
C23 |
H19 |
H20 |
120.0 |
120.0 |
O2 |
C23 |
H19 |
H21 |
240.0 |
240.1 |
H20 |
C23 |
H19 |
H21 |
120.0 |
120.0 |
O2 |
C23 |
H20 |
H19 |
240.0 |
240.0 |
O2 |
C23 |
H20 |
H21 |
120.0 |
120.0 |
H19 |
C23 |
H20 |
H21 |
240.0 |
240.0 |
O2 |
C23 |
H21 |
H19 |
120.0 |
119.9 |
O2 |
C23 |
H21 |
H20 |
240.0 |
240.0 |
H19 |
C23 |
H21 |
H20 |
120.0 |
120.0 |
C2 |
N1 |
H22 |
C3 |
180.0 |
180.0 |
H22 |
N1 |
C3 |
N2 |
174.4 |
179.7 |
H22 |
N1 |
C3 |
N3 |
357.6 |
359.9 |