PDB Chemical Component 0KJ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 0KJ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C25 C24 1.529 1.544
C25 C26 1.520 1.548
C24 N29 1.438 1.468
C24 C22 1.519 1.530
C35 C34 1.390 1.382
C35 C36 1.390 1.383
C34 C33 1.392 1.383
N29 C27 1.321 1.344
C26 C27 1.508 1.513
C22 O23 1.428 1.452
C36 C37 1.394 1.381
C27 O28 1.209 1.213
C33 C38 1.387 1.383
O22 C21 1.220 1.215
O23 C21 1.452 1.347
C37 C38 1.389 1.382
C21 N20 1.329 1.348
C38 C32 1.521 1.507
N20 C19 1.454 1.464
O9 S8 1.444 1.421
C32 C19 1.532 1.530
C19 C17 1.530 1.530
O10 S8 1.431 1.420
S8 N11 1.629 1.656
S8 C5 1.644 1.762
C14 C13 1.529 1.530
N11 C12 1.481 1.465
N11 C16 1.487 1.465
C17 C16 1.536 1.530
C17 O18 1.431 1.429
C5 C4 1.404 1.377
C5 C6 1.396 1.388
C4 C3 1.405 1.394
C13 C12 1.539 1.529
C13 C15 1.533 1.530
C6 C7 1.394 1.362
C18 C15 1.521 1.530
C3 S1 1.712 1.761
C3 C2 1.396 1.399
S1 C1 1.737 1.707
C7 C2 1.380 1.410
C2 N1 1.354 1.346
C1 N1 1.343 1.280
N29 H1 1.000 0.970
C24 H2 1.099 1.090
C25 H3 1.100 1.090
C25 H4 1.100 1.090
C26 H5 1.100 1.090
C26 H6 1.100 1.090
C22 H7 1.100 1.091
C22 H8 1.100 1.090
N20 H9 1.000 0.970
C19 H10 1.100 1.091
C32 H11 1.099 1.090
C32 H12 1.100 1.090
C37 H13 1.080 1.080
C36 H14 1.080 1.080
C35 H15 1.080 1.080
C34 H16 1.080 1.079
C33 H17 1.080 1.080
C17 H18 1.100 1.089
O18 H19 0.950 0.967
C16 H20 1.100 1.090
C16 H21 1.099 1.090
C12 H22 1.100 1.090
C12 H23 1.100 1.090
C13 H24 1.100 1.090
C14 H25 1.100 1.090
C14 H26 1.100 1.091
C14 H27 1.100 1.089
C15 H28 1.100 1.090
C15 H29 1.100 1.090
C18 H30 1.100 1.090
C18 H31 1.100 1.089
C18 H32 1.100 1.090
C6 H33 1.080 1.080
C7 H34 1.080 1.080
C4 H35 1.081 1.079
C1 H36 1.080 1.080

Bond Angles for 0KJ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C25 C24 C22 112.8 110.2
C25 C24 H2 109.7 110.4
C26 C25 H3 110.2 111.2
C26 C25 H4 110.2 110.8
C25 C26 H5 111.1 110.5
C25 C26 H6 111.1 110.5
C24 N29 H1 123.0 124.4
C24 C22 O23 106.5 109.5
C22 C24 H2 109.8 110.2
C24 C22 H7 110.2 109.4
C24 C22 H8 110.2 109.5
C35 C34 C33 119.9 120.0
C34 C35 H15 120.2 120.0
C35 C34 H16 120.1 120.0
C35 C36 H14 119.9 120.0
C33 C34 H16 120.0 120.0
C34 C33 H17 119.7 120.0
C22 O23 C21 119.8 117.0
O23 C22 H7 110.2 109.5
O23 C22 H8 110.2 109.5
C36 C37 H13 119.9 120.0
O22 C21 N20 125.9 120.0
O23 C21 N20 115.7 120.0
C21 N20 C19 125.9 120.0
C21 N20 H9 117.1 120.0
C38 C32 H11 109.0 109.5
C38 C32 H12 109.0 109.5
N20 C19 C17 109.5 109.5
C19 N20 H9 117.0 120.0
N20 C19 H10 108.8 109.5
O9 S8 C5 108.0 106.4
C32 C19 C17 114.3 109.5
C32 C19 H10 107.8 109.4
C19 C17 C16 113.6 109.5
C19 C17 O18 110.1 109.4
C17 C19 H10 107.8 109.4
C19 C17 H18 107.8 109.5
O10 S8 C5 110.3 106.4
S8 C5 C4 124.7 120.0
S8 C5 C6 118.0 120.0
C14 C13 C15 110.0 109.5
C14 C13 H24 107.8 109.5
N11 C12 H22 108.9 109.4
N11 C12 H23 108.9 109.4
N11 C16 H20 109.6 109.5
N11 C16 H21 109.6 109.4
O18 C17 C16 108.3 109.5
C16 C17 H18 107.8 109.5
C17 C16 H20 109.6 109.5
C17 C16 H21 109.7 109.5
O18 C17 H18 109.2 109.5
C17 O18 H19 109.5 114.0
C6 C5 C4 117.2 120.1
C5 C4 C3 121.6 119.9
C5 C4 H35 119.2 120.0
C5 C6 C7 121.4 120.8
C5 C6 H33 119.3 119.6
C4 C3 S1 125.5 131.7
C4 C3 C2 119.5 120.3
C3 C4 H35 119.2 120.0
C13 C12 H22 108.9 109.5
C13 C12 H23 108.9 109.5
C15 C13 H24 107.8 109.5
C13 C15 H28 108.4 109.5
C13 C15 H29 108.4 109.5
C6 C7 C2 120.9 120.4
C7 C6 H33 119.3 119.6
C6 C7 H34 119.6 119.8
C18 C15 H28 108.4 109.5
C18 C15 H29 108.4 109.4
S1 C3 C2 115.0 108.0
C3 S1 C1 86.4 90.8
C7 C2 C3 119.3 118.5
C3 C2 N1 110.7 111.8
S1 C1 N1 115.6 111.5
S1 C1 H36 122.2 124.3
C7 C2 N1 129.9 129.7
C2 C7 H34 119.6 119.7
N1 C1 H36 122.2 124.2
H3 C25 H4 109.5 110.9
H5 C26 H6 109.5 110.6
H7 C22 H8 109.5 109.5
H11 C32 H12 109.5 109.5
H20 C16 H21 109.4 109.4
H22 C12 H23 109.5 109.4
H25 C14 H26 109.4 109.5
H25 C14 H27 109.5 109.5
H26 C14 H27 109.5 109.4
H28 C15 H29 109.5 109.4
H30 C18 H31 109.4 109.5
H30 C18 H32 109.5 109.5
H31 C18 H32 109.5 109.5

Torsion Angles for 0KJ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C25 C24 N29 H1 170.2 197.1
C25 C24 C22 O23 58.4 182.5
C22 C24 C25 H2 122.8 122.0
C25 C24 C22 H7 177.9 302.5
C25 C24 C22 H8 298.9 62.4
C26 C25 C24 C22 254.7 215.4
C26 C25 C24 H2 132.0 93.4
H3 C25 C26 H4 120.9 123.8
H5 C26 C25 H6 237.9 122.7
C25 C24 C22 H2 237.3 237.9
C22 C24 N29 H1 290.9 316.0
C24 C22 O23 C21 237.2 179.9
O23 C22 C24 H7 240.5 240.0
O23 C22 C24 H8 119.5 120.1
H7 C22 C24 H8 239.1 240.0
C34 C35 C36 H14 180.2 180.0
C33 C34 C35 H16 180.0 179.7
C35 C34 C33 H17 180.8 180.0
C35 C36 C37 H13 179.6 180.0
C33 C34 C35 H15 179.6 180.0
C35 C34 C33 H16 180.0 180.3
O23 C22 C24 H2 181.1 304.6
C24 C22 O23 H7 119.5 119.9
C24 C22 O23 H8 240.5 239.9
C22 O23 C21 N20 165.4 180.0
H7 C22 O23 H8 120.9 120.0
C33 C38 C32 H11 56.8 149.7
C33 C38 C32 H12 176.2 29.7
O23 C21 O22 N20 178.1 179.9
O22 C21 N20 C19 3.4 360.0
O22 C21 N20 H9 183.4 180.0
C21 O23 C22 H7 117.7 60.0
C21 O23 C22 H8 356.8 300.0
O22 C21 O23 N20 181.7 180.1
O23 C21 N20 C19 185.2 180.0
O23 C21 N20 H9 5.2 0.1
C37 C38 C32 H11 237.7 330.0
C37 C38 C32 H12 357.1 210.0
C21 N20 C19 C17 249.7 205.1
C19 N20 C21 H9 180.0 180.0
C21 N20 C19 H10 7.3 325.0
C38 C32 C19 C17 178.1 175.0
C38 C32 C19 H10 58.2 55.1
H11 C32 C38 H12 240.6 120.0
C21 N20 C19 H9 180.0 180.0
C32 C19 N20 C17 234.6 239.9
C32 C19 N20 H10 117.0 120.0
N20 C19 C17 C16 166.0 175.0
N20 C19 C17 O18 287.6 295.0
C17 C19 N20 H10 242.3 240.0
N20 C19 C17 H18 46.6 55.0
O10 S8 O9 C5 123.2 237.1
O9 S8 C5 C4 333.7 197.4
O9 S8 C5 C6 155.7 17.7
N20 C19 C32 C17 122.5 120.1
C32 C19 N20 H9 304.3 265.0
N20 C19 C32 H10 242.4 240.0
C32 C19 C17 C16 287.9 295.0
C32 C19 C17 O18 49.5 55.0
C17 C19 C32 H10 119.9 119.9
C32 C19 C17 H18 168.5 175.0
C17 C19 N20 H9 69.6 25.0
N20 C19 C17 H10 118.2 120.0
C32 C19 C17 H10 240.1 240.1
O18 C17 C19 C16 121.6 120.0
C16 C17 C19 H18 119.4 120.0
C19 C17 C16 H20 173.2 305.0
C19 C17 C16 H21 53.0 65.0
O18 C17 C19 H18 241.0 240.0
C19 C17 O18 H19 180.0 300.0
O9 S8 O10 C5 238.0 122.9
O10 S8 C5 C4 208.0 330.4
O10 S8 C5 C6 30.0 150.6
S8 N11 C12 H22 334.4 6.8
S8 N11 C12 H23 93.7 126.8
S8 N11 C16 H20 239.1 145.0
S8 N11 C16 H21 359.3 25.1
C6 C5 S8 C4 182.0 180.3
S8 C5 C4 C3 182.6 180.0
S8 C5 C4 H35 2.6 360.0
S8 C5 C6 C7 177.1 180.0
S8 C5 C6 H33 357.0 359.9
C14 C13 C12 H22 301.7 304.4
C14 C13 C12 H23 182.4 184.4
C15 C13 C14 H24 117.4 120.0
C14 C13 C15 H28 184.3 55.0
C14 C13 C15 H29 303.1 175.0
C12 N11 C16 H20 10.8 324.9
C12 N11 C16 H21 131.0 205.0
C13 C12 N11 H22 239.6 239.9
C13 C12 N11 H23 120.4 120.0
H22 C12 N11 H23 240.7 240.1
N11 C16 C17 H18 52.5 305.0
C17 C16 N11 H20 240.1 120.1
C17 C16 N11 H21 119.9 240.0
H20 C16 N11 H21 239.8 119.9
C19 C17 C16 O18 122.6 119.9
C16 C17 C19 H10 47.8 55.0
C19 C17 C16 H18 240.6 239.9
N11 C16 C17 H20 119.9 240.0
N11 C16 C17 H21 240.1 120.0
O18 C17 C16 H18 118.0 120.0
C16 C17 O18 H19 304.7 60.0
H20 C16 C17 H21 120.2 240.0
C19 C17 O18 C16 235.3 240.0
O18 C17 C19 H10 169.4 174.9
C19 C17 O18 H18 118.2 120.0
C16 C17 O18 H18 242.9 240.0
O18 C17 C16 H20 50.6 185.1
O18 C17 C16 H21 290.4 305.0
S8 C5 C4 C6 182.0 180.3
C4 C5 C6 C7 358.9 0.3
C4 C5 C6 H33 178.9 180.2
C5 C4 C3 S1 180.0 179.9
C5 C4 C3 C2 0.2 0.0
C3 C4 C5 H35 180.0 180.0
S8 C5 C6 C4 178.2 179.7
C6 C5 C4 C3 0.6 359.7
C6 C5 C4 H35 180.6 179.7
C5 C6 C7 C2 0.8 360.0
C7 C6 C5 H33 180.0 180.1
C5 C6 C7 H34 180.8 180.0
C5 C4 C3 H35 180.0 180.0
S1 C3 C4 C2 179.9 179.9
C4 C3 S1 C1 180.1 180.1
C7 C2 C3 C4 359.6 0.2
C4 C3 C2 N1 179.8 180.0
N11 C12 C13 H22 120.3 120.0
N11 C12 C13 H23 239.6 240.0
H22 C12 C13 H23 119.3 120.0
C14 C13 C15 H24 242.6 240.0
C15 C13 C12 H22 65.2 64.4
C15 C13 C12 H23 305.9 304.4
C18 C15 C13 H28 239.4 240.0
C18 C15 C13 H29 120.6 120.0
H28 C15 C13 H29 241.2 240.0
C7 C6 C5 C4 358.9 0.3
C5 C6 C7 H33 180.0 179.9
C6 C7 C2 C3 360.0 359.8
C6 C7 C2 N1 179.6 180.1
C2 C7 C6 H34 180.0 180.0
C18 C15 C13 H24 181.1 55.0
C13 C15 C18 H28 120.6 120.0
C13 C15 C18 H29 239.4 240.0
H28 C15 C18 H29 118.8 120.0
C4 C3 S1 C2 180.1 180.1
S1 C3 C4 H35 0.0 359.9
C7 C2 C3 S1 179.7 180.3
S1 C3 C2 N1 359.9 0.0
C3 S1 C1 N1 0.0 0.0
C3 S1 C1 H36 180.0 180.0
C4 C3 C2 S1 179.9 179.9
C2 C3 C4 H35 180.2 180.0
C2 C3 S1 C1 0.0 360.0
C7 C2 C3 N1 179.7 180.3
C3 C2 C7 H34 180.0 179.7
C1 S1 C3 C2 0.0 360.0
N1 C1 S1 H36 180.0 180.0
C4 C3 C2 C7 359.6 0.2
C2 C7 C6 H33 180.9 180.1
C6 C7 C2 H34 180.0 180.0
S1 C3 C2 C7 179.7 180.3
C3 C2 C7 N1 180.3 179.7
C7 C2 N1 C3 180.3 179.7
N1 C2 C7 H34 359.6 0.1
C2 N1 C1 H36 179.9 180.0
C3 C2 N1 C1 0.1 360.0
S1 C1 N1 H36 180.0 180.0
C7 C2 N1 C1 180.4 179.7
C25 C24 H2 C22 124.5 122.0
H2 C24 N29 H1 52.5 77.9
H2 C24 C22 O23 181.1 304.6
H2 C24 C22 H7 300.6 64.6
H2 C24 C22 H8 61.5 184.5
H3 C25 C24 C22 14.3 333.8
H3 C25 C24 H2 251.5 211.7
C26 C25 H3 H4 238.7 236.3
H3 C25 C26 H5 347.4 147.9
H3 C25 C26 H6 109.4 25.2
H4 C25 C24 C22 135.2 97.5
H4 C25 C24 H2 12.4 335.5
C26 C25 H4 H3 121.3 123.9
H4 C25 C26 H5 226.4 24.2
H4 C25 C26 H6 348.5 261.5
H5 C26 C25 H3 347.4 147.9
H5 C26 C25 H4 226.4 24.2
C25 C26 H5 H6 123.0 237.4
H6 C26 C25 H3 109.4 25.2
H6 C26 C25 H4 348.5 261.5
C25 C26 H6 H5 237.0 122.7
C24 C22 H7 O23 242.8 240.0
H7 C22 C24 H2 300.6 64.6
C24 C22 H7 H8 121.4 120.0
H7 C22 O23 C21 117.7 60.0
O23 C22 H7 H8 238.6 240.0
C24 C22 H8 O23 117.2 120.1
H8 C22 C24 H2 61.5 184.5
C24 C22 H8 H7 238.6 240.1
H8 C22 O23 C21 356.8 300.0
O23 C22 H8 H7 121.4 120.0
C21 N20 H9 C19 180.0 180.0
H9 N20 C19 C17 69.6 25.0
H9 N20 C19 H10 187.3 145.0
N20 C19 H10 C17 241.3 240.0
H10 C19 N20 H9 187.3 145.0
C32 C19 H10 C17 123.9 120.0
H10 C19 C17 C16 47.8 55.0
H10 C19 C17 O18 169.4 174.9
H10 C19 C17 H18 288.4 294.9
C38 C32 H11 H12 119.1 240.0
H11 C32 C19 C17 57.8 295.0
H11 C32 C19 H10 297.9 175.1
C38 C32 H12 H11 240.9 120.0
H12 C32 C19 C17 298.4 54.9
H12 C32 C19 H10 178.5 295.0
H14 C36 C37 H13 359.6 0.1
H15 C35 C34 C33 179.6 180.0
H15 C35 C34 H16 359.6 0.4
H15 C35 C36 H14 0.2 359.6
C35 C34 H16 C33 180.0 179.7
H16 C34 C35 H15 359.6 0.4
H16 C34 C33 H17 0.7 359.7
H17 C33 C34 H16 0.7 359.7
C19 C17 H18 C16 123.0 120.0
C19 C17 H18 O18 240.4 240.0
H18 C17 C19 H10 288.4 294.9
O18 C17 H18 C16 242.6 240.0
H18 C17 C16 H20 292.6 65.1
H18 C17 C16 H21 172.4 185.0
H18 C17 O18 H19 61.8 180.0
H19 O18 C17 C16 304.7 60.0
H19 O18 C17 H18 61.8 180.0
N11 C16 H20 H21 120.3 240.1
H20 C16 C17 H18 292.6 65.1
C17 C16 H20 H21 239.7 120.0
N11 C16 H21 H20 239.7 120.0
H21 C16 C17 H18 172.4 185.0
C17 C16 H21 H20 120.3 240.0
N11 C12 H22 H23 118.9 119.9
C13 C12 H22 H23 241.1 239.9
N11 C12 H23 H22 241.1 240.1
C13 C12 H23 H22 118.9 120.1
C14 C13 H24 C15 118.8 120.0
H24 C13 C12 H22 181.9 184.4
H24 C13 C12 H23 62.6 64.4
H24 C13 C15 H28 301.7 175.0
H24 C13 C15 H29 60.5 295.0
H25 C14 C13 C15 57.1 53.6
H25 C14 C13 H24 299.7 293.7
H26 C14 H25 H27 120.0 120.0
H26 C14 C13 C15 177.1 173.7
H26 C14 C13 H24 59.7 53.7
H25 C14 H26 H27 240.0 240.0
H27 C14 C13 C15 297.1 293.6
H27 C14 C13 H24 179.7 173.6
H25 C14 H27 H26 119.9 120.0
H28 C15 C13 H24 301.7 175.0
C13 C15 H28 H29 118.1 120.0
C18 C15 H28 H29 241.9 240.0
H29 C15 C13 H24 60.5 295.0
C13 C15 H29 H28 241.9 240.0
C18 C15 H29 H28 118.0 120.0
H30 C18 C15 H28 59.4 300.0
H30 C18 C15 H29 300.6 180.0
H31 C18 H30 H32 120.0 120.1
H31 C18 C15 H28 179.4 59.9
H31 C18 C15 H29 60.6 300.0
H30 C18 H31 H32 240.0 240.0
H32 C18 C15 H28 299.4 180.0
H32 C18 C15 H29 180.6 60.1
H30 C18 H32 H31 119.9 120.0
H33 C6 C5 C4 178.9 180.2
C5 C6 H33 C7 180.0 180.1
H33 C6 C7 C2 180.9 180.1
H33 C6 C7 H34 0.9 0.1
C6 C7 H34 C2 180.0 180.0
H34 C7 C6 H33 0.9 0.1
H34 C7 C2 C3 180.0 179.7
H34 C7 C2 N1 359.6 0.1
C5 C4 H35 C3 180.0 180.0
H35 C4 C3 S1 0.0 359.9
H35 C4 C3 C2 180.2 180.0
S1 C1 H36 N1 180.0 180.1