PDB Chemical Component 0JN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0JN
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CAE |
CAI |
1.388 |
1.361 |
| CAE |
CAF |
1.388 |
1.394 |
| CAI |
CAT |
1.387 |
1.406 |
| CAF |
CAK |
1.388 |
1.361 |
| CAT |
CAJ |
1.390 |
1.405 |
| CAT |
CAU |
1.393 |
1.418 |
| CAK |
CAU |
1.392 |
1.405 |
| CAJ |
CAG |
1.387 |
1.361 |
| CAU |
CAR |
1.396 |
1.406 |
| CAA |
CAY |
1.529 |
1.530 |
| CAB |
CAY |
1.529 |
1.529 |
| CAG |
CAH |
1.389 |
1.393 |
| CAY |
NAX |
1.497 |
1.465 |
| CAY |
CAC |
1.530 |
1.530 |
| CAR |
CAH |
1.390 |
1.361 |
| CAR |
CAM |
1.400 |
1.507 |
| NAP |
NAX |
1.198 |
1.401 |
| NAP |
CAS |
1.332 |
1.302 |
| NAX |
C4 |
1.342 |
1.363 |
| CAS |
CAM |
1.549 |
1.507 |
| CAS |
C5 |
1.337 |
1.411 |
| C4 |
N3 |
1.346 |
1.332 |
| C4 |
C5 |
1.339 |
1.409 |
| N3 |
C2 |
1.395 |
1.315 |
| C5 |
C6 |
1.341 |
1.408 |
| C2 |
N1 |
1.393 |
1.321 |
| C6 |
N1 |
1.339 |
1.328 |
| C6 |
NAD |
1.328 |
1.381 |
| C2 |
H1 |
1.080 |
1.080 |
| CAA |
H2 |
1.100 |
1.090 |
| CAA |
H3 |
1.100 |
1.090 |
| CAA |
H4 |
1.100 |
1.090 |
| CAB |
H5 |
1.100 |
1.090 |
| CAB |
H6 |
1.100 |
1.090 |
| CAB |
H7 |
1.100 |
1.090 |
| CAE |
H8 |
1.080 |
1.080 |
| CAF |
H9 |
1.080 |
1.081 |
| CAG |
H10 |
1.080 |
1.080 |
| CAH |
H11 |
1.080 |
1.080 |
| CAI |
H12 |
1.080 |
1.079 |
| CAJ |
H13 |
1.079 |
1.080 |
| CAC |
H14 |
1.100 |
1.090 |
| CAC |
H15 |
1.100 |
1.089 |
| CAC |
H16 |
1.100 |
1.090 |
| NAD |
H17 |
1.000 |
0.970 |
| NAD |
H18 |
1.000 |
0.970 |
| CAM |
H19 |
1.100 |
1.090 |
| CAM |
H20 |
1.100 |
1.091 |
| CAK |
H21 |
1.080 |
1.080 |
Bond Angles for 0JN
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAF |
CAE |
CAI |
120.2 |
121.0 |
| CAE |
CAI |
CAT |
120.2 |
119.6 |
| CAI |
CAE |
H8 |
119.9 |
119.5 |
| CAE |
CAI |
H12 |
119.9 |
120.2 |
| CAE |
CAF |
CAK |
119.6 |
121.0 |
| CAF |
CAE |
H8 |
119.9 |
119.5 |
| CAE |
CAF |
H9 |
120.2 |
119.5 |
| CAI |
CAT |
CAJ |
119.3 |
121.3 |
| CAI |
CAT |
CAU |
120.2 |
119.4 |
| CAT |
CAI |
H12 |
119.9 |
120.2 |
| CAF |
CAK |
CAU |
120.7 |
119.6 |
| CAK |
CAF |
H9 |
120.2 |
119.5 |
| CAF |
CAK |
H21 |
119.6 |
120.2 |
| CAT |
CAJ |
H13 |
120.1 |
120.1 |
| CAJ |
CAG |
H10 |
120.2 |
119.5 |
| CAA |
CAY |
CAB |
109.4 |
109.5 |
| CAA |
CAY |
NAX |
110.5 |
109.5 |
| CAA |
CAY |
CAC |
109.4 |
109.5 |
| CAY |
CAA |
H2 |
109.5 |
109.5 |
| CAY |
CAA |
H3 |
109.5 |
109.5 |
| CAY |
CAA |
H4 |
109.5 |
109.5 |
| CAB |
CAY |
NAX |
108.9 |
109.5 |
| CAB |
CAY |
CAC |
108.8 |
109.5 |
| CAY |
CAB |
H5 |
109.5 |
109.5 |
| CAY |
CAB |
H6 |
109.5 |
109.5 |
| CAY |
CAB |
H7 |
109.4 |
109.5 |
| CAH |
CAG |
H10 |
120.2 |
119.5 |
| CAG |
CAH |
H11 |
119.4 |
119.5 |
| CAY |
CAC |
H14 |
109.5 |
109.5 |
| CAY |
CAC |
H15 |
109.4 |
109.5 |
| CAY |
CAC |
H16 |
109.5 |
109.5 |
| CAR |
CAH |
H11 |
119.5 |
119.5 |
| CAR |
CAM |
CAS |
113.8 |
109.5 |
| CAR |
CAM |
H19 |
108.4 |
109.4 |
| CAR |
CAM |
H20 |
108.3 |
109.5 |
| NAP |
CAS |
CAM |
122.1 |
125.7 |
| CAS |
CAM |
H19 |
108.3 |
109.5 |
| CAS |
CAM |
H20 |
108.4 |
109.4 |
| C4 |
C5 |
C6 |
120.2 |
118.3 |
| N3 |
C2 |
H1 |
121.1 |
118.7 |
| C5 |
C6 |
NAD |
118.2 |
120.8 |
| C6 |
NAD |
H17 |
109.5 |
120.0 |
| C6 |
NAD |
H18 |
109.5 |
120.0 |
| H2 |
CAA |
H3 |
109.5 |
109.5 |
| H2 |
CAA |
H4 |
109.4 |
109.4 |
| H3 |
CAA |
H4 |
109.5 |
109.5 |
| H5 |
CAB |
H6 |
109.5 |
109.5 |
| H5 |
CAB |
H7 |
109.5 |
109.4 |
| H6 |
CAB |
H7 |
109.5 |
109.4 |
| H14 |
CAC |
H15 |
109.5 |
109.5 |
| H14 |
CAC |
H16 |
109.5 |
109.5 |
| H15 |
CAC |
H16 |
109.5 |
109.5 |
| H17 |
NAD |
H18 |
109.5 |
120.0 |
| H19 |
CAM |
H20 |
109.5 |
109.5 |
Torsion Angles for 0JN
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAI |
CAE |
CAF |
CAK |
359.9 |
360.0 |
| CAF |
CAE |
CAI |
H8 |
180.0 |
179.7 |
| CAI |
CAE |
CAF |
H9 |
179.9 |
180.0 |
| CAE |
CAI |
CAT |
CAJ |
180.0 |
180.0 |
| CAE |
CAI |
CAT |
CAU |
360.0 |
0.1 |
| CAT |
CAI |
CAE |
H12 |
180.0 |
180.0 |
| CAF |
CAE |
CAI |
CAT |
0.0 |
360.0 |
| CAI |
CAE |
CAF |
H8 |
180.0 |
180.3 |
| CAF |
CAE |
CAI |
H12 |
180.0 |
180.0 |
| CAE |
CAF |
CAK |
CAU |
0.2 |
0.0 |
| CAK |
CAF |
CAE |
H9 |
180.0 |
180.0 |
| CAE |
CAF |
CAK |
H21 |
180.2 |
180.0 |
| CAT |
CAI |
CAE |
H8 |
180.0 |
180.3 |
| CAE |
CAI |
CAT |
H12 |
180.0 |
180.0 |
| CAI |
CAT |
CAJ |
H13 |
360.0 |
0.1 |
| CAK |
CAF |
CAE |
CAI |
359.9 |
360.0 |
| CAK |
CAF |
CAE |
H8 |
179.9 |
179.7 |
| CAE |
CAF |
CAK |
H9 |
180.0 |
180.0 |
| CAI |
CAT |
CAJ |
CAU |
179.9 |
180.1 |
| CAJ |
CAT |
CAI |
H12 |
0.0 |
359.9 |
| CAT |
CAJ |
CAG |
H10 |
180.0 |
180.0 |
| CAI |
CAT |
CAU |
CAJ |
180.1 |
179.9 |
| CAU |
CAT |
CAI |
H12 |
180.0 |
180.0 |
| CAF |
CAK |
CAU |
CAT |
359.8 |
0.0 |
| CAU |
CAT |
CAJ |
H13 |
180.0 |
180.1 |
| CAU |
CAK |
CAF |
H9 |
180.2 |
180.0 |
| CAF |
CAK |
CAU |
H21 |
180.0 |
180.0 |
| CAH |
CAG |
CAJ |
H10 |
180.0 |
180.0 |
| CAJ |
CAG |
CAH |
H11 |
179.5 |
179.9 |
| CAI |
CAT |
CAU |
CAR |
180.4 |
180.0 |
| CAF |
CAK |
CAU |
CAR |
179.5 |
180.0 |
| CAU |
CAR |
CAH |
H11 |
180.9 |
180.1 |
| CAU |
CAR |
CAM |
H19 |
49.9 |
205.0 |
| CAU |
CAR |
CAM |
H20 |
168.6 |
325.0 |
| CAB |
CAY |
CAA |
NAX |
240.1 |
240.0 |
| CAB |
CAY |
CAA |
CAC |
119.0 |
120.0 |
| CAA |
CAY |
CAB |
H5 |
180.0 |
60.0 |
| CAA |
CAY |
CAB |
H6 |
300.0 |
180.0 |
| CAA |
CAY |
CAB |
H7 |
60.0 |
300.0 |
| CAA |
CAY |
CAC |
H14 |
180.0 |
60.0 |
| CAA |
CAY |
CAC |
H15 |
300.0 |
180.0 |
| CAA |
CAY |
CAC |
H16 |
60.0 |
300.0 |
| H2 |
CAA |
CAY |
H3 |
240.0 |
240.0 |
| H2 |
CAA |
CAY |
H4 |
120.0 |
120.0 |
| H3 |
CAA |
CAY |
H4 |
240.0 |
240.0 |
| CAA |
CAY |
CAB |
NAX |
120.9 |
120.0 |
| CAA |
CAY |
CAB |
CAC |
240.5 |
240.0 |
| CAB |
CAY |
CAA |
H2 |
180.0 |
60.0 |
| CAB |
CAY |
CAA |
H3 |
300.0 |
180.0 |
| CAB |
CAY |
CAA |
H4 |
60.0 |
300.0 |
| CAB |
CAY |
CAC |
H14 |
60.6 |
300.0 |
| CAB |
CAY |
CAC |
H15 |
180.6 |
60.0 |
| CAB |
CAY |
CAC |
H16 |
300.6 |
180.0 |
| H5 |
CAB |
CAY |
H6 |
240.0 |
240.0 |
| H5 |
CAB |
CAY |
H7 |
120.0 |
120.0 |
| H6 |
CAB |
CAY |
H7 |
240.0 |
240.0 |
| CAJ |
CAG |
CAH |
H10 |
180.0 |
180.0 |
| CAR |
CAH |
CAG |
H11 |
180.0 |
180.1 |
| CAA |
CAY |
NAX |
CAB |
239.8 |
240.0 |
| CAA |
CAY |
NAX |
CAC |
120.8 |
120.0 |
| NAX |
CAY |
CAA |
H2 |
299.9 |
180.0 |
| NAX |
CAY |
CAA |
H3 |
59.9 |
300.0 |
| NAX |
CAY |
CAA |
H4 |
179.9 |
60.0 |
| CAB |
CAY |
NAX |
CAC |
241.0 |
240.0 |
| NAX |
CAY |
CAB |
H5 |
59.1 |
300.0 |
| NAX |
CAY |
CAB |
H6 |
179.1 |
60.0 |
| NAX |
CAY |
CAB |
H7 |
299.1 |
180.0 |
| CAA |
CAY |
CAC |
CAB |
119.4 |
120.0 |
| CAA |
CAY |
CAC |
NAX |
238.5 |
240.0 |
| CAC |
CAY |
CAA |
H2 |
60.9 |
299.9 |
| CAC |
CAY |
CAA |
H3 |
181.0 |
60.0 |
| CAC |
CAY |
CAA |
H4 |
301.0 |
180.0 |
| CAB |
CAY |
CAC |
NAX |
119.1 |
120.0 |
| CAC |
CAY |
CAB |
H5 |
299.5 |
180.0 |
| CAC |
CAY |
CAB |
H6 |
59.4 |
300.0 |
| CAC |
CAY |
CAB |
H7 |
179.5 |
60.0 |
| H14 |
CAC |
CAY |
H15 |
240.0 |
240.0 |
| H14 |
CAC |
CAY |
H16 |
120.0 |
120.0 |
| H15 |
CAC |
CAY |
H16 |
240.0 |
240.0 |
| CAR |
CAH |
CAG |
H10 |
179.4 |
180.0 |
| CAG |
CAH |
CAR |
H11 |
180.0 |
179.9 |
| CAM |
CAR |
CAH |
H11 |
359.7 |
0.1 |
| NAP |
CAS |
CAM |
CAR |
102.3 |
275.7 |
| CAS |
CAM |
CAR |
H19 |
239.4 |
240.0 |
| CAS |
CAM |
CAR |
H20 |
120.6 |
120.0 |
| H19 |
CAM |
CAR |
H20 |
241.2 |
240.0 |
| NAX |
NAP |
CAS |
CAM |
179.3 |
180.0 |
| CAR |
CAM |
CAS |
NAP |
102.3 |
275.7 |
| NAP |
CAS |
CAM |
H19 |
341.6 |
155.7 |
| NAP |
CAS |
CAM |
H20 |
222.9 |
35.7 |
| CAR |
CAM |
CAS |
H19 |
120.6 |
120.0 |
| CAR |
CAM |
CAS |
H20 |
239.4 |
240.0 |
| H19 |
CAM |
CAS |
H20 |
118.8 |
120.0 |
| CAS |
C5 |
C6 |
NAD |
359.5 |
0.0 |
| C4 |
N3 |
C2 |
H1 |
179.7 |
180.0 |
| C4 |
C5 |
C6 |
NAD |
179.9 |
180.0 |
| C5 |
C6 |
NAD |
H17 |
180.2 |
353.3 |
| C5 |
C6 |
NAD |
H18 |
300.2 |
173.3 |
| H17 |
NAD |
C6 |
H18 |
240.0 |
180.0 |
| H2 |
CAA |
CAY |
CAB |
180.0 |
60.0 |
| H2 |
CAA |
CAY |
NAX |
299.9 |
180.0 |
| H2 |
CAA |
CAY |
CAC |
60.9 |
299.9 |
| CAY |
CAA |
H2 |
H3 |
120.0 |
120.1 |
| CAY |
CAA |
H2 |
H4 |
240.0 |
240.0 |
| H3 |
CAA |
H2 |
H4 |
120.0 |
120.0 |
| H3 |
CAA |
CAY |
CAB |
300.0 |
180.0 |
| H3 |
CAA |
CAY |
NAX |
59.9 |
300.0 |
| H3 |
CAA |
CAY |
CAC |
181.0 |
60.0 |
| CAY |
CAA |
H3 |
H2 |
239.9 |
240.0 |
| CAY |
CAA |
H3 |
H4 |
120.0 |
120.0 |
| H2 |
CAA |
H3 |
H4 |
240.1 |
240.0 |
| H4 |
CAA |
CAY |
CAB |
60.0 |
300.0 |
| H4 |
CAA |
CAY |
NAX |
179.9 |
60.0 |
| H4 |
CAA |
CAY |
CAC |
301.0 |
180.0 |
| CAY |
CAA |
H4 |
H2 |
120.0 |
120.0 |
| CAY |
CAA |
H4 |
H3 |
240.0 |
240.0 |
| H2 |
CAA |
H4 |
H3 |
120.0 |
120.0 |
| H5 |
CAB |
CAY |
NAX |
59.1 |
300.0 |
| H5 |
CAB |
CAY |
CAC |
299.5 |
180.0 |
| CAY |
CAB |
H5 |
H6 |
120.0 |
120.1 |
| CAY |
CAB |
H5 |
H7 |
240.0 |
240.0 |
| H6 |
CAB |
H5 |
H7 |
120.0 |
119.9 |
| H6 |
CAB |
CAY |
NAX |
179.1 |
60.0 |
| H6 |
CAB |
CAY |
CAC |
59.4 |
300.0 |
| CAY |
CAB |
H6 |
H5 |
240.0 |
239.9 |
| CAY |
CAB |
H6 |
H7 |
120.0 |
120.0 |
| H5 |
CAB |
H6 |
H7 |
240.0 |
240.1 |
| H7 |
CAB |
CAY |
NAX |
299.1 |
180.0 |
| H7 |
CAB |
CAY |
CAC |
179.5 |
60.0 |
| CAY |
CAB |
H7 |
H5 |
120.0 |
120.0 |
| CAY |
CAB |
H7 |
H6 |
240.0 |
240.0 |
| H5 |
CAB |
H7 |
H6 |
120.0 |
119.9 |
| CAF |
CAE |
H8 |
CAI |
180.0 |
180.3 |
| H8 |
CAE |
CAI |
CAT |
180.0 |
180.3 |
| H8 |
CAE |
CAI |
H12 |
0.0 |
0.3 |
| H8 |
CAE |
CAF |
CAK |
179.9 |
179.7 |
| H8 |
CAE |
CAF |
H9 |
359.9 |
359.7 |
| H9 |
CAF |
CAE |
CAI |
179.9 |
180.0 |
| CAE |
CAF |
H9 |
CAK |
180.0 |
180.0 |
| H9 |
CAF |
CAE |
H8 |
359.9 |
359.7 |
| H9 |
CAF |
CAK |
CAU |
180.2 |
180.0 |
| H9 |
CAF |
CAK |
H21 |
0.2 |
0.0 |
| H10 |
CAG |
CAH |
H11 |
359.5 |
359.9 |
| H11 |
CAH |
CAG |
H10 |
359.5 |
359.9 |
| CAE |
CAI |
H12 |
CAT |
180.0 |
180.0 |
| H12 |
CAI |
CAE |
H8 |
0.0 |
0.3 |
| H12 |
CAI |
CAT |
CAJ |
0.0 |
359.9 |
| H12 |
CAI |
CAT |
CAU |
180.0 |
180.0 |
| H13 |
CAJ |
CAG |
H10 |
0.1 |
359.9 |
| CAY |
CAC |
H14 |
H15 |
120.0 |
120.0 |
| CAY |
CAC |
H14 |
H16 |
240.0 |
240.0 |
| H15 |
CAC |
H14 |
H16 |
120.0 |
120.0 |
| CAY |
CAC |
H15 |
H14 |
240.0 |
240.0 |
| CAY |
CAC |
H15 |
H16 |
120.0 |
120.0 |
| H14 |
CAC |
H15 |
H16 |
240.0 |
240.0 |
| CAY |
CAC |
H16 |
H14 |
120.0 |
120.0 |
| CAY |
CAC |
H16 |
H15 |
240.0 |
240.0 |
| H14 |
CAC |
H16 |
H15 |
120.0 |
120.0 |
| C6 |
NAD |
H17 |
H18 |
120.0 |
180.0 |
| C6 |
NAD |
H18 |
H17 |
240.0 |
180.0 |
| CAR |
CAM |
H19 |
CAS |
236.0 |
239.9 |
| CAR |
CAM |
H19 |
H20 |
118.0 |
120.0 |
| CAS |
CAM |
H19 |
H20 |
242.0 |
240.0 |
| CAR |
CAM |
H20 |
CAS |
124.0 |
120.0 |
| CAR |
CAM |
H20 |
H19 |
242.0 |
240.1 |
| CAS |
CAM |
H20 |
H19 |
118.0 |
120.0 |
| CAF |
CAK |
H21 |
CAU |
180.0 |
180.0 |
| H21 |
CAK |
CAF |
H9 |
0.2 |
0.0 |