PDB Chemical Component 0JJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0JJ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C10 |
C9 |
1.534 |
1.507 |
| C10 |
N6 |
1.477 |
1.465 |
| N5 |
C9 |
1.336 |
1.309 |
| N5 |
N4 |
1.242 |
1.287 |
| C9 |
N3 |
1.392 |
1.352 |
| N6 |
C11 |
1.342 |
1.387 |
| N4 |
C8 |
1.333 |
1.323 |
| C11 |
C12 |
1.398 |
1.385 |
| C11 |
C14 |
1.392 |
1.417 |
| C12 |
C13 |
1.397 |
1.389 |
| N3 |
N1 |
1.240 |
1.396 |
| N3 |
C8 |
1.393 |
1.375 |
| N1 |
C3 |
1.351 |
1.317 |
| C8 |
C2 |
1.391 |
1.408 |
| C14 |
N8 |
1.342 |
1.333 |
| C14 |
C15 |
1.398 |
1.415 |
| N8 |
C18 |
1.327 |
1.310 |
| C13 |
N7 |
1.329 |
1.313 |
| S1 |
C4 |
1.693 |
1.772 |
| S1 |
N2 |
1.659 |
1.697 |
| C3 |
C4 |
1.392 |
1.479 |
| C3 |
C1 |
1.397 |
1.412 |
| C2 |
C1 |
1.388 |
1.359 |
| C18 |
C17 |
1.397 |
1.399 |
| N7 |
C15 |
1.346 |
1.337 |
| C15 |
C16 |
1.396 |
1.407 |
| C4 |
C6 |
1.340 |
1.377 |
| N2 |
C5 |
1.340 |
1.301 |
| C17 |
C16 |
1.397 |
1.380 |
| C17 |
O1 |
1.373 |
1.359 |
| C6 |
C5 |
1.350 |
1.373 |
| C5 |
C7 |
1.529 |
1.507 |
| O1 |
C19 |
1.436 |
1.429 |
| C7 |
H1 |
1.099 |
1.090 |
| C7 |
H2 |
1.100 |
1.090 |
| C7 |
H3 |
1.100 |
1.090 |
| C6 |
H4 |
1.080 |
1.080 |
| C1 |
H5 |
1.080 |
1.079 |
| C2 |
H6 |
1.080 |
1.080 |
| C10 |
H7 |
1.100 |
1.089 |
| C10 |
H8 |
1.100 |
1.090 |
| N6 |
H9 |
1.000 |
0.969 |
| C12 |
H10 |
1.080 |
1.080 |
| C13 |
H11 |
1.080 |
1.080 |
| C16 |
H12 |
1.080 |
1.080 |
| C18 |
H13 |
1.080 |
1.081 |
| C19 |
H14 |
1.100 |
1.090 |
| C19 |
H15 |
1.100 |
1.091 |
| C19 |
H16 |
1.100 |
1.090 |
Bond Angles for 0JJ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C10 |
N6 |
C11 |
123.4 |
120.0 |
| N6 |
C10 |
H7 |
109.1 |
109.5 |
| N6 |
C10 |
H8 |
109.1 |
109.5 |
| C10 |
N6 |
H9 |
105.9 |
120.0 |
| N6 |
C11 |
C12 |
122.5 |
121.0 |
| N6 |
C11 |
C14 |
119.1 |
121.0 |
| C11 |
N6 |
H9 |
105.9 |
120.0 |
| C12 |
C11 |
C14 |
118.3 |
118.0 |
| C11 |
C12 |
C13 |
119.2 |
119.8 |
| C11 |
C12 |
H10 |
120.4 |
120.1 |
| C11 |
C14 |
N8 |
119.8 |
121.0 |
| C11 |
C14 |
C15 |
119.9 |
118.6 |
| C12 |
C13 |
N7 |
121.0 |
121.8 |
| C13 |
C12 |
H10 |
120.4 |
120.2 |
| C12 |
C13 |
H11 |
119.5 |
119.1 |
| C8 |
C2 |
H6 |
121.3 |
120.4 |
| C14 |
N8 |
C18 |
121.4 |
121.6 |
| N8 |
C18 |
C17 |
121.5 |
121.5 |
| N8 |
C18 |
H13 |
119.3 |
119.3 |
| C13 |
N7 |
C15 |
121.4 |
121.6 |
| N7 |
C13 |
H11 |
119.5 |
119.2 |
| C3 |
C1 |
H5 |
120.7 |
120.0 |
| C2 |
C1 |
H5 |
120.7 |
119.9 |
| C18 |
C17 |
O1 |
118.0 |
120.1 |
| C17 |
C18 |
H13 |
119.2 |
119.2 |
| N7 |
C15 |
C16 |
120.6 |
121.0 |
| C15 |
C16 |
H12 |
120.5 |
120.9 |
| C4 |
C6 |
H4 |
123.2 |
122.9 |
| C17 |
C16 |
H12 |
120.6 |
120.9 |
| C17 |
O1 |
C19 |
117.3 |
117.0 |
| C5 |
C7 |
H1 |
109.5 |
109.5 |
| C5 |
C7 |
H2 |
109.5 |
109.4 |
| C5 |
C7 |
H3 |
109.5 |
109.5 |
| O1 |
C19 |
H14 |
109.5 |
109.5 |
| O1 |
C19 |
H15 |
109.4 |
109.5 |
| O1 |
C19 |
H16 |
109.5 |
109.5 |
| H1 |
C7 |
H2 |
109.4 |
109.5 |
| H1 |
C7 |
H3 |
109.5 |
109.5 |
| H2 |
C7 |
H3 |
109.5 |
109.4 |
| H7 |
C10 |
H8 |
109.5 |
109.5 |
| H14 |
C19 |
H15 |
109.5 |
109.4 |
| H14 |
C19 |
H16 |
109.5 |
109.5 |
| H15 |
C19 |
H16 |
109.5 |
109.4 |
Torsion Angles for 0JJ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C10 |
N6 |
C11 |
C12 |
354.7 |
0.0 |
| C10 |
N6 |
C11 |
C14 |
174.9 |
179.7 |
| C11 |
N6 |
C10 |
H9 |
238.1 |
180.0 |
| H7 |
C10 |
N6 |
H8 |
119.6 |
120.0 |
| C11 |
N6 |
C10 |
H7 |
160.1 |
60.0 |
| C11 |
N6 |
C10 |
H8 |
40.6 |
300.0 |
| C10 |
N6 |
C11 |
H9 |
121.9 |
180.0 |
| C12 |
C11 |
N6 |
C14 |
179.8 |
180.3 |
| N6 |
C11 |
C12 |
C13 |
179.9 |
180.0 |
| N6 |
C11 |
C12 |
H10 |
359.8 |
360.0 |
| N6 |
C11 |
C14 |
N8 |
359.7 |
0.1 |
| N6 |
C11 |
C14 |
C15 |
179.9 |
179.7 |
| N4 |
C8 |
C2 |
H6 |
0.3 |
0.1 |
| N6 |
C11 |
C12 |
C14 |
180.2 |
179.7 |
| C12 |
C11 |
N6 |
H9 |
232.8 |
180.0 |
| C12 |
C11 |
C14 |
N8 |
179.9 |
179.8 |
| C12 |
C11 |
C14 |
C15 |
0.1 |
359.4 |
| C11 |
C12 |
C13 |
N7 |
0.3 |
360.0 |
| C13 |
C12 |
C11 |
H10 |
180.0 |
180.1 |
| C11 |
C12 |
C13 |
H11 |
180.3 |
180.0 |
| N6 |
C11 |
C14 |
C12 |
179.8 |
180.3 |
| C14 |
C11 |
N6 |
H9 |
53.0 |
359.7 |
| C14 |
C11 |
C12 |
C13 |
359.6 |
0.3 |
| C14 |
C11 |
C12 |
H10 |
179.6 |
180.2 |
| C11 |
C14 |
N8 |
C18 |
180.2 |
180.0 |
| C13 |
C12 |
C11 |
C14 |
359.6 |
0.3 |
| C11 |
C12 |
C13 |
H10 |
180.0 |
179.9 |
| C12 |
C13 |
N7 |
C15 |
360.0 |
360.0 |
| N7 |
C13 |
C12 |
H11 |
180.0 |
180.0 |
| N3 |
C8 |
C2 |
H6 |
180.0 |
179.8 |
| N1 |
C3 |
C1 |
H5 |
179.6 |
180.2 |
| C8 |
C2 |
C1 |
H5 |
180.2 |
180.0 |
| C11 |
C14 |
N8 |
C15 |
180.2 |
179.6 |
| C14 |
N8 |
C18 |
C17 |
0.1 |
359.2 |
| C14 |
N8 |
C18 |
H13 |
180.1 |
179.9 |
| C11 |
C14 |
C15 |
N8 |
179.8 |
180.3 |
| C14 |
C15 |
C16 |
H12 |
180.2 |
180.3 |
| N8 |
C18 |
C17 |
O1 |
180.4 |
180.0 |
| C17 |
C18 |
N8 |
H13 |
180.0 |
179.2 |
| N7 |
C13 |
C12 |
H10 |
180.4 |
180.0 |
| C12 |
C13 |
N7 |
H11 |
180.0 |
180.0 |
| C13 |
N7 |
C15 |
C16 |
180.3 |
180.0 |
| S1 |
C4 |
C6 |
H4 |
180.3 |
179.9 |
| C3 |
C4 |
C6 |
H4 |
358.7 |
359.9 |
| C2 |
C1 |
C3 |
H5 |
180.0 |
180.1 |
| C3 |
C1 |
C2 |
H5 |
180.0 |
179.9 |
| N8 |
C18 |
C17 |
H13 |
180.0 |
180.8 |
| C18 |
C17 |
C16 |
H12 |
179.8 |
179.3 |
| C18 |
C17 |
O1 |
C19 |
199.6 |
0.0 |
| C11 |
C14 |
C15 |
N7 |
0.2 |
0.6 |
| C15 |
N7 |
C13 |
H11 |
180.0 |
180.0 |
| N7 |
C15 |
C16 |
H12 |
359.7 |
0.0 |
| C11 |
C14 |
C15 |
C16 |
179.6 |
180.3 |
| C17 |
C16 |
C15 |
H12 |
180.0 |
180.0 |
| N2 |
C5 |
C7 |
H1 |
0.0 |
269.8 |
| N2 |
C5 |
C7 |
H2 |
120.0 |
29.8 |
| N2 |
C5 |
C7 |
H3 |
240.0 |
149.7 |
| C15 |
C16 |
C17 |
H12 |
180.0 |
180.0 |
| O1 |
C17 |
C18 |
H13 |
0.4 |
359.2 |
| O1 |
C17 |
C16 |
H12 |
359.5 |
0.3 |
| C17 |
O1 |
C19 |
H14 |
180.0 |
300.0 |
| C17 |
O1 |
C19 |
H15 |
300.0 |
60.0 |
| C17 |
O1 |
C19 |
H16 |
60.0 |
180.0 |
| C6 |
C5 |
C7 |
H1 |
180.6 |
90.0 |
| C6 |
C5 |
C7 |
H2 |
300.6 |
210.0 |
| C6 |
C5 |
C7 |
H3 |
60.6 |
330.0 |
| H1 |
C7 |
C5 |
H2 |
240.0 |
240.0 |
| H1 |
C7 |
C5 |
H3 |
120.0 |
120.0 |
| H2 |
C7 |
C5 |
H3 |
240.0 |
240.1 |
| H14 |
C19 |
O1 |
H15 |
240.0 |
240.0 |
| H14 |
C19 |
O1 |
H16 |
120.0 |
120.0 |
| H15 |
C19 |
O1 |
H16 |
240.0 |
240.0 |
| C5 |
C7 |
H1 |
H2 |
120.0 |
120.0 |
| C5 |
C7 |
H1 |
H3 |
240.0 |
240.0 |
| H2 |
C7 |
H1 |
H3 |
120.0 |
120.0 |
| C5 |
C7 |
H2 |
H1 |
240.0 |
240.0 |
| C5 |
C7 |
H2 |
H3 |
120.0 |
119.9 |
| H1 |
C7 |
H2 |
H3 |
240.0 |
239.9 |
| C5 |
C7 |
H3 |
H1 |
120.0 |
120.0 |
| C5 |
C7 |
H3 |
H2 |
240.0 |
240.1 |
| H1 |
C7 |
H3 |
H2 |
120.0 |
120.1 |
| H6 |
C2 |
C1 |
H5 |
0.1 |
0.0 |
| H7 |
C10 |
N6 |
C11 |
160.1 |
60.0 |
| N6 |
C10 |
H7 |
H8 |
240.7 |
240.0 |
| H7 |
C10 |
N6 |
H9 |
282.1 |
240.0 |
| H8 |
C10 |
N6 |
C11 |
40.6 |
300.0 |
| N6 |
C10 |
H8 |
H7 |
119.3 |
120.0 |
| H8 |
C10 |
N6 |
H9 |
162.5 |
120.0 |
| C10 |
N6 |
H9 |
C11 |
227.5 |
180.0 |
| H9 |
N6 |
C10 |
H7 |
282.1 |
240.0 |
| H9 |
N6 |
C10 |
H8 |
162.5 |
120.0 |
| H9 |
N6 |
C11 |
C12 |
232.8 |
180.0 |
| H9 |
N6 |
C11 |
C14 |
53.0 |
359.7 |
| H10 |
C12 |
C11 |
C14 |
179.6 |
180.2 |
| C11 |
C12 |
H10 |
C13 |
180.0 |
180.1 |
| H10 |
C12 |
C13 |
N7 |
180.4 |
180.0 |
| H10 |
C12 |
C13 |
H11 |
0.4 |
0.1 |
| C12 |
C13 |
H11 |
N7 |
180.0 |
180.0 |
| H11 |
C13 |
C12 |
H10 |
0.4 |
0.1 |
| H11 |
C13 |
N7 |
C15 |
180.0 |
180.0 |
| N8 |
C18 |
H13 |
C17 |
180.0 |
179.3 |
| H13 |
C18 |
C17 |
O1 |
0.4 |
359.2 |
| O1 |
C19 |
H14 |
H15 |
120.0 |
120.0 |
| O1 |
C19 |
H14 |
H16 |
240.0 |
240.0 |
| H15 |
C19 |
H14 |
H16 |
120.0 |
119.9 |
| O1 |
C19 |
H15 |
H14 |
240.0 |
239.9 |
| O1 |
C19 |
H15 |
H16 |
120.0 |
120.0 |
| H14 |
C19 |
H15 |
H16 |
240.0 |
240.0 |
| O1 |
C19 |
H16 |
H14 |
120.1 |
120.1 |
| O1 |
C19 |
H16 |
H15 |
240.0 |
240.0 |
| H14 |
C19 |
H16 |
H15 |
120.0 |
119.9 |