PDB Chemical Component 0J3
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0J3
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| OAC |
NBC |
1.297 |
1.217 |
| OAB |
NBC |
1.317 |
1.219 |
| NBC |
CAW |
1.427 |
1.480 |
| CAW |
CAI |
1.410 |
1.383 |
| CAW |
CAK |
1.390 |
1.382 |
| CAI |
CAG |
1.424 |
1.383 |
| FAE |
CBF |
1.354 |
1.399 |
| CAK |
CAV |
1.421 |
1.382 |
| CAG |
CAH |
1.403 |
1.382 |
| FAF |
CBF |
1.316 |
1.399 |
| CBF |
FAD |
1.313 |
1.399 |
| CBF |
CAY |
1.530 |
1.507 |
| CAV |
CAH |
1.405 |
1.382 |
| CAV |
CAS |
1.530 |
1.507 |
| CAY |
CAL |
1.445 |
1.391 |
| CAY |
CAN |
1.391 |
1.362 |
| CAL |
CAZ |
1.372 |
1.379 |
| CAS |
NAU |
1.449 |
1.465 |
| CAN |
CBA |
1.415 |
1.405 |
| CAZ |
NAU |
1.448 |
1.393 |
| CAZ |
CBB |
1.449 |
1.411 |
| CBA |
CBB |
1.401 |
1.416 |
| CBA |
NAT |
1.350 |
1.338 |
| CBB |
CAM |
1.423 |
1.405 |
| NAT |
CAJ |
1.316 |
1.310 |
| CAM |
CAX |
1.384 |
1.382 |
| CAJ |
CAX |
1.434 |
1.400 |
| CAX |
NBE |
1.479 |
1.398 |
| CAQ |
NBE |
1.371 |
1.470 |
| CAQ |
CAO |
1.499 |
1.531 |
| NBE |
CAR |
1.376 |
1.470 |
| CAO |
NBD |
1.489 |
1.470 |
| CAR |
CAP |
1.491 |
1.530 |
| NBD |
CAP |
1.482 |
1.470 |
| NBD |
CAA |
1.419 |
1.469 |
| CAQ |
H1 |
1.100 |
1.090 |
| CAQ |
H2 |
1.099 |
1.089 |
| CAO |
H3 |
1.100 |
1.090 |
| CAO |
H4 |
1.100 |
1.090 |
| CAA |
H6 |
1.100 |
1.091 |
| CAA |
H7 |
1.100 |
1.089 |
| CAA |
H8 |
1.101 |
1.090 |
| CAP |
H9 |
1.100 |
1.091 |
| CAP |
H10 |
1.099 |
1.090 |
| CAR |
H11 |
1.100 |
1.090 |
| CAR |
H12 |
1.100 |
1.090 |
| CAM |
H13 |
1.081 |
1.080 |
| CAJ |
H14 |
1.080 |
1.080 |
| CAN |
H15 |
1.080 |
1.080 |
| CAL |
H16 |
1.080 |
1.080 |
| NAU |
H17 |
1.000 |
0.969 |
| CAS |
H18 |
1.100 |
1.090 |
| CAS |
H19 |
1.100 |
1.090 |
| CAK |
H20 |
1.080 |
1.081 |
| CAH |
H21 |
1.080 |
1.080 |
| CAG |
H22 |
1.080 |
1.080 |
| CAI |
H23 |
1.080 |
1.081 |
Bond Angles for 0J3
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAW |
CAI |
H23 |
119.9 |
120.0 |
| CAW |
CAK |
H20 |
120.5 |
120.0 |
| CAI |
CAG |
H22 |
120.4 |
119.9 |
| FAE |
CBF |
FAD |
109.1 |
109.5 |
| CAK |
CAV |
CAH |
120.7 |
120.0 |
| CAG |
CAH |
H21 |
119.9 |
120.0 |
| FAF |
CBF |
FAD |
110.6 |
109.5 |
| CBF |
CAY |
CAL |
120.6 |
119.5 |
| CAV |
CAH |
H21 |
119.9 |
120.0 |
| CAV |
CAS |
H18 |
108.6 |
109.4 |
| CAV |
CAS |
H19 |
108.6 |
109.5 |
| CAY |
CAL |
CAZ |
120.2 |
120.7 |
| CAY |
CAL |
H16 |
119.9 |
119.6 |
| CAY |
CAN |
H15 |
119.9 |
120.0 |
| CAL |
CAZ |
NAU |
119.9 |
120.3 |
| CAZ |
CAL |
H16 |
119.9 |
119.7 |
| CAS |
NAU |
H17 |
106.7 |
120.0 |
| CAZ |
NAU |
H17 |
106.7 |
120.0 |
| CBB |
CAM |
H13 |
120.7 |
121.0 |
| NAT |
CAJ |
H14 |
119.7 |
119.2 |
| CAO |
CAQ |
NBE |
111.5 |
109.3 |
| CAQ |
NBE |
CAR |
121.7 |
110.9 |
| NBE |
CAQ |
H1 |
108.9 |
109.5 |
| NBE |
CAQ |
H2 |
109.0 |
109.5 |
| CAQ |
CAO |
NBD |
112.7 |
109.4 |
| CAO |
CAQ |
H1 |
109.0 |
109.5 |
| CAO |
CAQ |
H2 |
109.0 |
109.5 |
| CAQ |
CAO |
H3 |
108.7 |
109.5 |
| CAQ |
CAO |
H4 |
108.7 |
109.5 |
| NBE |
CAR |
H11 |
109.0 |
109.5 |
| NBE |
CAR |
H12 |
109.0 |
109.5 |
| CAO |
NBD |
CAP |
113.0 |
110.8 |
| CAO |
NBD |
CAA |
122.1 |
111.0 |
| NBD |
CAO |
H3 |
108.7 |
109.5 |
| NBD |
CAO |
H4 |
108.7 |
109.5 |
| CAR |
CAP |
H9 |
108.5 |
109.5 |
| CAR |
CAP |
H10 |
108.4 |
109.5 |
| CAA |
NBD |
CAP |
121.1 |
111.0 |
| NBD |
CAP |
H9 |
108.4 |
109.4 |
| NBD |
CAP |
H10 |
108.5 |
109.5 |
| NBD |
CAA |
H6 |
109.5 |
109.5 |
| NBD |
CAA |
H7 |
109.4 |
109.5 |
| NBD |
CAA |
H8 |
109.5 |
109.4 |
| H1 |
CAQ |
H2 |
109.5 |
109.5 |
| H3 |
CAO |
H4 |
109.4 |
109.4 |
| H6 |
CAA |
H7 |
109.5 |
109.5 |
| H6 |
CAA |
H8 |
109.4 |
109.4 |
| H7 |
CAA |
H8 |
109.5 |
109.5 |
| H9 |
CAP |
H10 |
109.5 |
109.5 |
| H11 |
CAR |
H12 |
109.5 |
109.5 |
| H18 |
CAS |
H19 |
109.5 |
109.5 |
Torsion Angles for 0J3
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NBC |
CAW |
CAI |
H23 |
359.8 |
0.5 |
| NBC |
CAW |
CAK |
H20 |
0.7 |
359.7 |
| CAI |
CAW |
CAK |
H20 |
180.4 |
180.4 |
| CAW |
CAI |
CAG |
H22 |
179.8 |
180.5 |
| CAI |
CAG |
CAH |
H21 |
180.0 |
180.0 |
| FAF |
CBF |
FAE |
FAD |
119.8 |
120.0 |
| FAE |
CBF |
CAY |
CAL |
65.6 |
210.1 |
| CAK |
CAV |
CAH |
H21 |
180.5 |
179.8 |
| CAK |
CAV |
CAS |
H18 |
229.3 |
150.2 |
| CAK |
CAV |
CAS |
H19 |
348.4 |
30.3 |
| CAV |
CAH |
CAG |
H21 |
180.0 |
179.9 |
| FAE |
CBF |
FAF |
FAD |
241.1 |
240.0 |
| FAF |
CBF |
CAY |
CAL |
182.0 |
330.0 |
| FAD |
CBF |
CAY |
CAL |
306.3 |
90.0 |
| CBF |
CAY |
CAL |
CAZ |
181.5 |
180.0 |
| CBF |
CAY |
CAL |
H16 |
1.5 |
360.0 |
| CBF |
CAY |
CAN |
H15 |
358.7 |
0.0 |
| CAG |
CAH |
CAV |
H21 |
180.0 |
180.1 |
| CAH |
CAV |
CAS |
H18 |
50.5 |
330.0 |
| CAH |
CAV |
CAS |
H19 |
169.6 |
210.1 |
| CAV |
CAS |
NAU |
H17 |
41.9 |
360.0 |
| H18 |
CAS |
CAV |
H19 |
241.0 |
120.0 |
| CAL |
CAY |
CAN |
H15 |
179.9 |
180.0 |
| CAY |
CAL |
CAZ |
NAU |
180.3 |
180.0 |
| CAZ |
CAL |
CAY |
H16 |
180.0 |
180.0 |
| CAY |
CAL |
CAZ |
H16 |
180.0 |
180.0 |
| CAL |
CAZ |
NAU |
H17 |
232.4 |
180.0 |
| CAZ |
NAU |
CAS |
H17 |
238.5 |
180.0 |
| NAU |
CAZ |
CAL |
H16 |
0.3 |
0.0 |
| CAS |
NAU |
CAZ |
H17 |
121.5 |
180.0 |
| CAZ |
CBB |
CAM |
H13 |
0.2 |
360.0 |
| CBA |
CBB |
CAM |
H13 |
179.6 |
180.0 |
| CBA |
NAT |
CAJ |
H14 |
179.8 |
180.0 |
| CAX |
NBE |
CAQ |
H1 |
331.6 |
56.9 |
| CAX |
NBE |
CAQ |
H2 |
91.0 |
296.8 |
| CAX |
NBE |
CAR |
H11 |
308.5 |
63.2 |
| CAX |
NBE |
CAR |
H12 |
68.0 |
303.2 |
| NBE |
CAQ |
CAO |
NBD |
318.7 |
58.5 |
| CAO |
CAQ |
NBE |
H1 |
239.7 |
119.9 |
| CAO |
CAQ |
NBE |
H2 |
120.3 |
240.0 |
| NBE |
CAQ |
CAO |
H3 |
79.2 |
178.4 |
| NBE |
CAQ |
CAO |
H4 |
198.2 |
298.4 |
| CAQ |
NBE |
CAR |
H11 |
173.4 |
299.4 |
| CAQ |
NBE |
CAR |
H12 |
292.9 |
179.3 |
| H1 |
CAQ |
NBE |
H2 |
240.6 |
120.1 |
| CAO |
CAQ |
NBE |
CAR |
349.5 |
300.6 |
| NBE |
CAQ |
CAO |
H1 |
120.3 |
240.1 |
| NBE |
CAQ |
CAO |
H2 |
239.7 |
120.0 |
| CAQ |
CAO |
NBD |
CAP |
48.8 |
300.6 |
| CAQ |
CAO |
NBD |
CAA |
250.5 |
176.8 |
| NBD |
CAO |
CAQ |
H3 |
239.5 |
240.0 |
| NBD |
CAO |
CAQ |
H4 |
120.5 |
120.0 |
| H1 |
CAQ |
CAO |
H2 |
119.4 |
239.9 |
| H3 |
CAO |
CAQ |
H4 |
241.0 |
240.0 |
| CAR |
NBE |
CAQ |
H1 |
109.8 |
180.7 |
| CAR |
NBE |
CAQ |
H2 |
229.2 |
60.6 |
| NBE |
CAR |
CAP |
H9 |
79.4 |
181.7 |
| NBE |
CAR |
CAP |
H10 |
198.2 |
61.6 |
| H11 |
CAR |
NBE |
H12 |
240.5 |
120.0 |
| NBD |
CAO |
CAQ |
NBE |
318.7 |
58.5 |
| NBD |
CAO |
CAQ |
H1 |
198.4 |
178.4 |
| NBD |
CAO |
CAQ |
H2 |
79.0 |
298.5 |
| CAQ |
CAO |
NBD |
H3 |
120.5 |
119.9 |
| CAQ |
CAO |
NBD |
H4 |
239.5 |
239.9 |
| CAA |
NBD |
CAO |
CAP |
201.7 |
236.2 |
| CAO |
NBD |
CAP |
H9 |
232.2 |
179.3 |
| CAO |
NBD |
CAP |
H10 |
113.4 |
299.3 |
| CAO |
NBD |
CAA |
H6 |
180.0 |
59.9 |
| CAO |
NBD |
CAA |
H7 |
300.0 |
180.0 |
| CAO |
NBD |
CAA |
H8 |
60.0 |
300.0 |
| H3 |
CAO |
NBD |
H4 |
119.0 |
120.0 |
| CAQ |
NBE |
CAR |
CAP |
53.1 |
59.4 |
| NBD |
CAP |
CAR |
H9 |
239.4 |
119.9 |
| NBD |
CAP |
CAR |
H10 |
120.6 |
240.0 |
| H9 |
CAP |
CAR |
H10 |
241.2 |
120.0 |
| CAO |
NBD |
CAP |
CAA |
201.5 |
236.2 |
| CAP |
NBD |
CAO |
H3 |
288.3 |
180.7 |
| CAP |
NBD |
CAO |
H4 |
169.3 |
60.7 |
| CAR |
CAP |
NBD |
H9 |
120.6 |
240.0 |
| CAR |
CAP |
NBD |
H10 |
239.4 |
120.1 |
| CAP |
NBD |
CAA |
H6 |
23.4 |
296.2 |
| CAP |
NBD |
CAA |
H7 |
143.5 |
56.2 |
| CAP |
NBD |
CAA |
H8 |
263.5 |
176.3 |
| H9 |
CAP |
NBD |
H10 |
118.8 |
240.0 |
| CAO |
NBD |
CAA |
CAP |
156.5 |
123.7 |
| CAA |
NBD |
CAO |
H3 |
130.0 |
56.9 |
| CAA |
NBD |
CAO |
H4 |
11.0 |
296.9 |
| CAA |
NBD |
CAP |
H9 |
30.7 |
303.1 |
| CAA |
NBD |
CAP |
H10 |
271.9 |
63.1 |
| H6 |
CAA |
NBD |
H7 |
240.0 |
240.0 |
| H6 |
CAA |
NBD |
H8 |
120.0 |
119.9 |
| H7 |
CAA |
NBD |
H8 |
240.0 |
240.0 |
| CAO |
CAQ |
H1 |
NBE |
121.9 |
240.2 |
| H1 |
CAQ |
NBE |
CAR |
109.8 |
180.7 |
| NBE |
CAQ |
H1 |
H2 |
119.0 |
239.9 |
| H1 |
CAQ |
CAO |
NBD |
198.4 |
178.4 |
| CAO |
CAQ |
H1 |
H2 |
240.9 |
120.1 |
| H1 |
CAQ |
CAO |
H3 |
318.9 |
298.3 |
| H1 |
CAQ |
CAO |
H4 |
77.9 |
58.3 |
| CAO |
CAQ |
H2 |
NBE |
238.1 |
119.8 |
| H2 |
CAQ |
NBE |
CAR |
229.2 |
60.6 |
| NBE |
CAQ |
H2 |
H1 |
241.0 |
120.1 |
| H2 |
CAQ |
CAO |
NBD |
79.0 |
298.5 |
| CAO |
CAQ |
H2 |
H1 |
119.1 |
239.9 |
| H2 |
CAQ |
CAO |
H3 |
199.5 |
58.5 |
| H2 |
CAQ |
CAO |
H4 |
318.5 |
178.5 |
| H3 |
CAO |
CAQ |
NBE |
79.2 |
178.4 |
| CAQ |
CAO |
H3 |
NBD |
237.1 |
240.1 |
| H3 |
CAO |
CAQ |
H1 |
318.9 |
298.3 |
| H3 |
CAO |
CAQ |
H2 |
199.5 |
58.5 |
| CAQ |
CAO |
H3 |
H4 |
118.5 |
120.1 |
| H3 |
CAO |
NBD |
CAP |
288.3 |
180.7 |
| H3 |
CAO |
NBD |
CAA |
130.0 |
56.9 |
| NBD |
CAO |
H3 |
H4 |
241.4 |
240.0 |
| H4 |
CAO |
CAQ |
NBE |
198.2 |
298.4 |
| CAQ |
CAO |
H4 |
NBD |
122.9 |
120.0 |
| H4 |
CAO |
CAQ |
H1 |
77.9 |
58.3 |
| H4 |
CAO |
CAQ |
H2 |
318.5 |
178.5 |
| CAQ |
CAO |
H4 |
H3 |
241.5 |
240.0 |
| H4 |
CAO |
NBD |
CAP |
169.3 |
60.7 |
| H4 |
CAO |
NBD |
CAA |
11.0 |
296.9 |
| NBD |
CAO |
H4 |
H3 |
118.5 |
120.0 |
| H6 |
CAA |
NBD |
CAP |
23.4 |
296.2 |
| NBD |
CAA |
H6 |
H7 |
120.0 |
120.0 |
| NBD |
CAA |
H6 |
H8 |
240.0 |
240.1 |
| H7 |
CAA |
H6 |
H8 |
120.0 |
120.0 |
| H7 |
CAA |
NBD |
CAP |
143.5 |
56.2 |
| NBD |
CAA |
H7 |
H6 |
239.9 |
240.0 |
| NBD |
CAA |
H7 |
H8 |
120.0 |
120.0 |
| H6 |
CAA |
H7 |
H8 |
240.0 |
240.0 |
| H8 |
CAA |
NBD |
CAP |
263.5 |
176.3 |
| NBD |
CAA |
H8 |
H6 |
120.0 |
120.0 |
| NBD |
CAA |
H8 |
H7 |
240.0 |
240.0 |
| H6 |
CAA |
H8 |
H7 |
120.0 |
120.0 |
| CAR |
CAP |
H9 |
H10 |
118.1 |
239.9 |
| NBD |
CAP |
H9 |
H10 |
241.8 |
120.0 |
| CAR |
CAP |
H10 |
H9 |
241.9 |
120.1 |
| NBD |
CAP |
H10 |
H9 |
118.1 |
240.0 |
| NBE |
CAR |
H11 |
H12 |
119.2 |
239.9 |
| H11 |
CAR |
CAP |
H9 |
319.2 |
301.6 |
| H11 |
CAR |
CAP |
H10 |
78.0 |
181.6 |
| NBE |
CAR |
H12 |
H11 |
240.8 |
120.0 |
| H12 |
CAR |
CAP |
H9 |
199.7 |
61.7 |
| H12 |
CAR |
CAP |
H10 |
318.5 |
301.6 |
| CAY |
CAL |
H16 |
CAZ |
180.0 |
180.0 |
| H16 |
CAL |
CAZ |
NAU |
0.3 |
0.0 |
| CAV |
CAS |
H18 |
H19 |
118.5 |
240.0 |
| H18 |
CAS |
NAU |
H17 |
281.4 |
120.0 |
| CAV |
CAS |
H19 |
H18 |
241.5 |
119.9 |
| H19 |
CAS |
NAU |
H17 |
162.3 |
240.0 |
| H20 |
CAK |
CAV |
CAH |
179.3 |
180.0 |
| H22 |
CAG |
CAH |
H21 |
359.9 |
0.0 |
| H23 |
CAI |
CAG |
H22 |
359.8 |
360.0 |