PDB Chemical Component 0J2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0J2
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O2 |
C3 |
1.264 |
1.208 |
| C3 |
O1 |
1.270 |
1.343 |
| C3 |
C1 |
1.490 |
1.507 |
| C1 |
C4 |
1.489 |
1.529 |
| C4 |
C2 |
1.492 |
1.530 |
| C4 |
C8 |
1.491 |
1.507 |
| N1 |
C8 |
1.311 |
1.300 |
| N1 |
N2 |
1.365 |
1.399 |
| C8 |
C9 |
1.474 |
1.422 |
| N2 |
C7 |
1.431 |
1.365 |
| C9 |
O4 |
1.373 |
1.221 |
| C9 |
C6 |
1.476 |
1.414 |
| C7 |
C6 |
1.357 |
1.406 |
| C7 |
N5 |
1.368 |
1.336 |
| C6 |
C5 |
1.431 |
1.462 |
| N5 |
C10 |
1.398 |
1.315 |
| C5 |
O3 |
1.373 |
1.218 |
| C5 |
N4 |
1.398 |
1.355 |
| C10 |
N4 |
1.452 |
1.361 |
| C10 |
N3 |
1.420 |
1.368 |
| C1 |
H1 |
1.100 |
1.091 |
| C1 |
H2 |
1.100 |
1.091 |
| C2 |
H3 |
1.100 |
1.089 |
| C2 |
H4 |
1.100 |
1.090 |
| C2 |
H5 |
1.100 |
1.090 |
| O1 |
H6 |
0.950 |
0.967 |
| C4 |
H7 |
1.100 |
1.091 |
| N3 |
H8 |
0.999 |
0.970 |
| N3 |
H9 |
1.000 |
0.970 |
| N4 |
H10 |
0.999 |
0.970 |
| N2 |
H11 |
1.000 |
0.970 |
Bond Angles for 0J2
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C3 |
O1 |
H6 |
109.5 |
117.1 |
| C3 |
C1 |
C4 |
109.5 |
109.5 |
| C3 |
C1 |
H1 |
109.4 |
109.5 |
| C3 |
C1 |
H2 |
109.5 |
109.4 |
| C1 |
C4 |
C2 |
110.2 |
109.5 |
| C1 |
C4 |
C8 |
109.5 |
109.5 |
| C4 |
C1 |
H1 |
109.5 |
109.5 |
| C4 |
C1 |
H2 |
109.5 |
109.5 |
| C1 |
C4 |
H7 |
109.0 |
109.5 |
| C4 |
C2 |
H3 |
109.5 |
109.5 |
| C4 |
C2 |
H4 |
109.5 |
109.4 |
| C4 |
C2 |
H5 |
109.5 |
109.5 |
| N1 |
C8 |
C4 |
122.6 |
119.7 |
| C4 |
C8 |
C9 |
117.3 |
119.7 |
| C8 |
C4 |
H7 |
108.9 |
109.4 |
| N2 |
N1 |
C8 |
120.1 |
122.0 |
| N1 |
C8 |
C9 |
120.1 |
120.5 |
| N1 |
N2 |
C7 |
123.6 |
120.5 |
| N1 |
N2 |
H11 |
118.2 |
119.7 |
| C8 |
C9 |
O4 |
118.7 |
120.7 |
| N2 |
C7 |
C6 |
119.9 |
119.2 |
| N2 |
C7 |
N5 |
117.0 |
121.6 |
| C7 |
N2 |
H11 |
118.2 |
119.8 |
| C7 |
N5 |
C10 |
120.4 |
121.7 |
| C6 |
C5 |
N4 |
119.5 |
117.4 |
| C5 |
N4 |
H10 |
120.3 |
119.9 |
| C10 |
N4 |
H10 |
120.3 |
119.9 |
| C10 |
N3 |
H8 |
120.0 |
120.1 |
| C10 |
N3 |
H9 |
120.0 |
120.0 |
| H1 |
C1 |
H2 |
109.5 |
109.4 |
| H3 |
C2 |
H4 |
109.5 |
109.4 |
| H3 |
C2 |
H5 |
109.4 |
109.5 |
| H4 |
C2 |
H5 |
109.5 |
109.5 |
| H8 |
N3 |
H9 |
120.0 |
120.0 |
Torsion Angles for 0J2
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O2 |
C3 |
O1 |
H6 |
360.0 |
0.1 |
| O2 |
C3 |
C1 |
C4 |
149.5 |
360.0 |
| O2 |
C3 |
C1 |
H1 |
269.5 |
120.0 |
| O2 |
C3 |
C1 |
H2 |
29.4 |
240.0 |
| O1 |
C3 |
C1 |
C4 |
324.3 |
180.0 |
| O1 |
C3 |
C1 |
H1 |
84.3 |
300.1 |
| O1 |
C3 |
C1 |
H2 |
204.3 |
60.0 |
| C3 |
C1 |
C4 |
C2 |
168.6 |
65.0 |
| C3 |
C1 |
C4 |
C8 |
290.2 |
185.1 |
| C4 |
C1 |
C3 |
H1 |
240.0 |
240.0 |
| C4 |
C1 |
C3 |
H2 |
120.0 |
120.0 |
| C3 |
C1 |
C4 |
H7 |
49.2 |
305.0 |
| H1 |
C1 |
C3 |
H2 |
240.0 |
240.1 |
| C3 |
C1 |
C4 |
H1 |
120.0 |
120.0 |
| C3 |
C1 |
C4 |
H2 |
240.0 |
240.0 |
| C1 |
C4 |
C2 |
H3 |
180.0 |
300.1 |
| C1 |
C4 |
C2 |
H4 |
300.0 |
60.0 |
| C1 |
C4 |
C2 |
H5 |
60.0 |
180.0 |
| N1 |
C8 |
C4 |
C1 |
316.9 |
354.9 |
| C1 |
C4 |
C8 |
C9 |
137.6 |
175.1 |
| C8 |
C4 |
C1 |
H7 |
241.0 |
240.0 |
| H1 |
C1 |
C4 |
H2 |
120.0 |
120.0 |
| C1 |
C4 |
C2 |
C8 |
121.1 |
120.1 |
| C2 |
C4 |
C1 |
H1 |
48.6 |
304.9 |
| C2 |
C4 |
C1 |
H2 |
288.6 |
185.0 |
| C1 |
C4 |
C2 |
H7 |
240.6 |
240.0 |
| H3 |
C2 |
C4 |
H4 |
240.0 |
240.1 |
| H3 |
C2 |
C4 |
H5 |
120.0 |
120.1 |
| H4 |
C2 |
C4 |
H5 |
240.0 |
240.0 |
| C1 |
C4 |
C8 |
C2 |
238.5 |
239.9 |
| C8 |
C4 |
C1 |
H1 |
170.2 |
65.0 |
| C8 |
C4 |
C1 |
H2 |
50.2 |
305.0 |
| C1 |
C4 |
C8 |
H7 |
119.0 |
120.0 |
| C8 |
C4 |
C2 |
H3 |
58.9 |
180.0 |
| C8 |
C4 |
C2 |
H4 |
178.9 |
300.0 |
| C8 |
C4 |
C2 |
H5 |
299.0 |
59.9 |
| N2 |
N1 |
C8 |
C4 |
180.0 |
180.0 |
| N1 |
C8 |
C4 |
C9 |
179.3 |
179.9 |
| C4 |
C8 |
C9 |
O4 |
356.4 |
359.9 |
| C1 |
C4 |
C8 |
N1 |
316.9 |
354.9 |
| C4 |
C8 |
N1 |
C9 |
180.7 |
180.1 |
| N1 |
C8 |
C4 |
H7 |
197.9 |
234.9 |
| C8 |
N1 |
N2 |
C7 |
0.9 |
0.1 |
| C8 |
N1 |
N2 |
H11 |
181.0 |
180.0 |
| N1 |
C8 |
C9 |
O4 |
177.1 |
180.0 |
| N2 |
N1 |
C8 |
C9 |
359.3 |
359.9 |
| N1 |
N2 |
C7 |
C6 |
359.9 |
360.0 |
| N1 |
N2 |
C7 |
N5 |
178.9 |
179.9 |
| C7 |
N2 |
N1 |
H11 |
180.0 |
180.1 |
| N1 |
C8 |
C9 |
C4 |
180.7 |
180.1 |
| C9 |
C8 |
C4 |
H7 |
18.6 |
55.1 |
| C7 |
N2 |
N1 |
C8 |
0.9 |
0.1 |
| N1 |
N2 |
C7 |
H11 |
180.0 |
179.9 |
| N2 |
C7 |
N5 |
C10 |
180.7 |
180.0 |
| C4 |
C8 |
C9 |
C6 |
179.0 |
179.9 |
| N1 |
C8 |
C9 |
C6 |
359.7 |
0.1 |
| N2 |
C7 |
C6 |
N5 |
178.9 |
180.0 |
| C6 |
C7 |
N2 |
H11 |
179.9 |
180.1 |
| N2 |
C7 |
N5 |
C6 |
181.1 |
180.0 |
| N5 |
C7 |
N2 |
H11 |
358.9 |
0.0 |
| N2 |
C7 |
C6 |
C5 |
179.6 |
180.0 |
| C6 |
C5 |
N4 |
H10 |
179.7 |
180.0 |
| N5 |
C10 |
N4 |
H10 |
180.5 |
180.1 |
| N5 |
C10 |
N3 |
H8 |
0.0 |
360.0 |
| N5 |
C10 |
N3 |
H9 |
180.0 |
180.0 |
| C10 |
N4 |
C5 |
H10 |
180.0 |
180.1 |
| C5 |
N4 |
C10 |
H10 |
180.0 |
179.9 |
| N4 |
C10 |
N3 |
H8 |
180.4 |
180.0 |
| N4 |
C10 |
N3 |
H9 |
0.3 |
0.0 |
| H8 |
N3 |
C10 |
H9 |
180.1 |
180.0 |
| C3 |
C1 |
H1 |
C4 |
239.9 |
240.0 |
| C3 |
C1 |
H1 |
H2 |
120.0 |
120.0 |
| H1 |
C1 |
C4 |
C2 |
48.6 |
304.9 |
| H1 |
C1 |
C4 |
C8 |
170.2 |
65.0 |
| C4 |
C1 |
H1 |
H2 |
240.0 |
240.0 |
| H1 |
C1 |
C4 |
H7 |
289.2 |
185.0 |
| C3 |
C1 |
H2 |
C4 |
120.1 |
120.0 |
| C3 |
C1 |
H2 |
H1 |
240.1 |
240.0 |
| H2 |
C1 |
C4 |
C2 |
288.6 |
185.0 |
| H2 |
C1 |
C4 |
C8 |
50.2 |
305.0 |
| C4 |
C1 |
H2 |
H1 |
120.0 |
120.0 |
| H2 |
C1 |
C4 |
H7 |
169.2 |
65.0 |
| C4 |
C2 |
H3 |
H4 |
120.0 |
119.9 |
| C4 |
C2 |
H3 |
H5 |
240.0 |
239.9 |
| H4 |
C2 |
H3 |
H5 |
120.0 |
120.0 |
| C4 |
C2 |
H4 |
H3 |
240.0 |
240.0 |
| C4 |
C2 |
H4 |
H5 |
120.0 |
120.0 |
| H3 |
C2 |
H4 |
H5 |
240.0 |
240.0 |
| C4 |
C2 |
H5 |
H3 |
120.0 |
120.1 |
| C4 |
C2 |
H5 |
H4 |
240.0 |
240.0 |
| H3 |
C2 |
H5 |
H4 |
120.0 |
120.0 |
| C1 |
C4 |
H7 |
C2 |
120.2 |
120.0 |
| C1 |
C4 |
H7 |
C8 |
240.6 |
240.0 |
| H7 |
C4 |
C1 |
H1 |
289.2 |
185.0 |
| H7 |
C4 |
C1 |
H2 |
169.2 |
65.0 |
| H7 |
C4 |
C2 |
H3 |
299.4 |
60.1 |
| H7 |
C4 |
C2 |
H4 |
59.4 |
180.0 |
| H7 |
C4 |
C2 |
H5 |
179.4 |
300.0 |
| H7 |
C4 |
C8 |
C9 |
18.6 |
55.1 |
| C10 |
N3 |
H8 |
H9 |
179.9 |
180.0 |
| C10 |
N3 |
H9 |
H8 |
180.1 |
180.0 |
| H11 |
N2 |
N1 |
C8 |
181.0 |
180.0 |
| N1 |
N2 |
H11 |
C7 |
180.0 |
180.1 |
| H11 |
N2 |
C7 |
C6 |
179.9 |
180.1 |
| H11 |
N2 |
C7 |
N5 |
358.9 |
0.0 |