PDB Chemical Component 0HY

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 0HY

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C9 1.423 1.368
N5 C9 1.468 1.361
N5 C2 1.406 1.354
C9 N2 1.400 1.315
O1 C2 1.378 1.218
C2 C1 1.448 1.462
N2 C6 1.365 1.335
C1 C6 1.373 1.407
C1 C7 1.504 1.414
C6 N4 1.428 1.365
C7 O4 1.368 1.221
C7 C4 1.481 1.422
N4 N3 1.347 1.398
C4 N3 1.294 1.300
C4 C11 1.519 1.508
C11 C10 1.501 1.530
C11 C8 1.502 1.529
C8 C3 1.496 1.507
C3 O3 1.253 1.342
C3 O2 1.262 1.208
O3 C5 1.375 1.452
N1 H1 1.000 0.970
N1 H2 1.000 0.970
C5 H3 1.100 1.089
C5 H4 1.100 1.091
C5 H5 1.100 1.090
C8 H6 1.100 1.090
C8 H7 1.100 1.090
C10 H8 1.100 1.090
C10 H9 1.100 1.091
C10 H10 1.100 1.090
N5 H11 1.000 0.971
C11 H12 1.100 1.090
N4 H14 1.000 0.970

Bond Angles for 0HY

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N1 C9 N2 121.1 118.5
C9 N1 H1 120.0 120.0
C9 N1 H2 120.0 120.0
O1 C2 C1 121.6 121.2
C2 C1 C6 117.7 118.5
C2 C1 C7 125.7 122.2
C1 C6 N2 124.4 119.2
N2 C6 N4 118.6 121.7
C6 C1 C7 116.6 119.3
C1 C6 N4 116.9 119.1
C1 C7 O4 121.2 120.8
C1 C7 C4 119.8 118.5
C6 N4 H14 116.3 119.7
C7 C4 C11 119.2 119.7
C4 C11 C10 109.9 109.4
C4 C11 C8 116.3 109.5
C4 C11 H12 106.3 109.5
C11 C10 H8 109.5 109.5
C11 C10 H9 109.5 109.5
C11 C10 H10 109.5 109.5
C11 C8 H6 108.1 109.5
C11 C8 H7 108.0 109.5
C8 C3 O3 117.4 120.0
C8 C3 O2 120.9 120.0
O2 C3 O3 118.8 119.9
C3 O3 C5 118.3 117.1
O3 C5 H3 109.5 109.5
O3 C5 H4 109.4 109.4
O3 C5 H5 109.5 109.4
H1 N1 H2 120.0 120.0
H3 C5 H4 109.5 109.5
H3 C5 H5 109.5 109.5
H4 C5 H5 109.5 109.5
H6 C8 H7 109.5 109.5
H8 C10 H9 109.5 109.5
H8 C10 H10 109.5 109.5
H9 C10 H10 109.5 109.4

Torsion Angles for 0HY

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H1 N1 C9 H2 180.0 180.3
N5 C9 N1 H1 179.0 180.5
N5 C9 N1 H2 359.0 0.2
N2 C9 N1 H1 360.0 360.0
N2 C9 N1 H2 180.0 179.7
O1 C2 C1 C6 181.8 180.0
O1 C2 C1 C7 1.8 359.7
C2 C1 C6 N2 0.2 359.7
C6 C1 C2 C7 180.0 180.2
C2 C1 C6 N4 179.5 179.8
C2 C1 C7 O4 3.1 0.2
C2 C1 C7 C4 179.9 180.3
N1 C9 N2 C6 178.8 179.9
N2 C6 C1 C7 180.2 179.9
C1 C6 N2 N4 179.3 180.0
N2 C6 N4 H14 0.0 0.0
C2 C1 C6 C7 180.0 179.8
N2 C6 C1 N4 180.7 180.0
C6 C1 C7 O4 183.0 180.0
C6 C1 C7 C4 359.8 0.1
C1 C6 N4 H14 180.7 180.0
C2 C1 C7 C6 180.0 180.3
C7 C1 C6 N2 180.2 179.9
C7 C1 C6 N4 359.5 360.0
C1 C7 C4 C11 174.5 180.0
C1 C6 N4 N2 180.7 180.0
N4 C6 C1 C7 359.5 360.0
C1 C7 O4 C4 176.8 180.1
O4 C7 C4 C11 351.3 0.1
C1 C7 C4 O4 183.1 179.9
C7 C4 C11 C10 211.9 294.9
C7 C4 C11 C8 85.2 175.0
C7 C4 C11 H12 326.8 54.9
N2 C6 N4 N3 180.0 180.0
C1 C6 N4 N3 0.7 360.0
C1 C7 C4 N3 0.8 359.9
C4 C11 C10 H8 180.0 180.0
C4 C11 C10 H9 300.0 300.0
C4 C11 C10 H10 60.0 60.0
C4 C11 C8 H6 162.5 65.0
C4 C11 C8 H7 280.8 305.0
C4 C11 C10 C8 230.2 240.0
C4 C11 C10 H12 114.8 120.0
C10 C11 C8 H6 36.2 305.0
C10 C11 C8 H7 154.5 185.0
H8 C10 C11 H9 240.0 240.0
H8 C10 C11 H10 120.0 120.0
H9 C10 C11 H10 240.0 240.1
C4 C11 C8 C10 126.3 120.0
C4 C11 C8 H12 241.7 240.0
H6 C8 C11 H7 241.7 120.0
O2 C3 C8 O3 199.7 180.0
C8 C3 O3 C5 210.1 180.0
C8 C3 O3 O2 199.3 180.0
C3 O3 C5 H3 180.0 180.1
C3 O3 C5 H4 300.0 300.0
C3 O3 C5 H5 60.0 60.0
C8 C3 O2 O3 160.0 180.0
O2 C3 O3 C5 10.8 360.0
H3 C5 O3 H4 240.0 240.0
H3 C5 O3 H5 120.0 120.1
H4 C5 O3 H5 240.0 240.1
H1 N1 C9 N2 360.0 360.0
C9 N1 H1 H2 180.0 179.7
H2 N1 C9 N2 180.0 179.7
C9 N1 H2 H1 180.0 180.3
O3 C5 H3 H4 120.0 120.0
O3 C5 H3 H5 240.0 240.0
H4 C5 H3 H5 120.0 120.0
O3 C5 H4 H3 240.0 240.0
O3 C5 H4 H5 120.0 119.9
H3 C5 H4 H5 240.0 239.9
O3 C5 H5 H3 120.0 120.1
O3 C5 H5 H4 240.0 240.1
H3 C5 H5 H4 120.0 120.0
C11 C8 H6 H7 117.4 239.9
H6 C8 C3 O3 103.2 300.0
H6 C8 C3 O2 303.0 120.0
C11 C8 H7 H6 242.5 120.1
H7 C8 C3 O3 344.9 59.9
H7 C8 C3 O2 184.6 240.0
C11 C10 H8 H9 120.0 120.1
C11 C10 H8 H10 240.0 240.0
H9 C10 H8 H10 120.0 119.9
C11 C10 H9 H8 240.0 239.9
C11 C10 H9 H10 120.0 120.0
H8 C10 H9 H10 240.0 240.0
C11 C10 H10 H8 120.0 120.1
C11 C10 H10 H9 240.0 240.0
H8 C10 H10 H9 120.0 120.0
C4 C11 H12 C10 242.8 240.1
C4 C11 H12 C8 124.6 120.0
H12 C11 C10 H8 65.2 60.0
H12 C11 C10 H9 185.2 180.1
H12 C11 C10 H10 305.2 300.0
H12 C11 C8 H6 280.8 185.0
H12 C11 C8 H7 39.1 65.0