PDB Chemical Component 0HX
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0HX
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C8 |
C7 |
1.527 |
1.507 |
C11 |
C12 |
1.530 |
1.531 |
C12 |
C13 |
1.530 |
1.529 |
N2 |
C7 |
1.333 |
1.348 |
N2 |
C2 |
1.468 |
1.465 |
C7 |
O6 |
1.225 |
1.212 |
C13 |
O1 |
1.418 |
1.429 |
C13 |
C14 |
1.521 |
1.530 |
C1 |
O1 |
1.420 |
1.429 |
C1 |
C2 |
1.520 |
1.534 |
C1 |
O5 |
1.412 |
1.430 |
C2 |
C3 |
1.530 |
1.533 |
C3 |
O3 |
1.430 |
1.429 |
C3 |
C4 |
1.529 |
1.505 |
C14 |
C15 |
1.529 |
1.530 |
O5 |
C5 |
1.357 |
1.356 |
C4 |
C5 |
1.390 |
1.325 |
C5 |
C6 |
1.531 |
1.473 |
C6 |
O6A |
1.246 |
1.215 |
C6 |
O6B |
1.246 |
1.348 |
C14 |
H141 |
1.100 |
1.091 |
C14 |
H142 |
1.100 |
1.090 |
C15 |
H151 |
1.100 |
1.090 |
C15 |
H152 |
1.100 |
1.090 |
C15 |
H153 |
1.099 |
1.089 |
C1 |
H1 |
1.100 |
1.089 |
C2 |
H2 |
1.100 |
1.089 |
C4 |
H4 |
1.080 |
1.080 |
C3 |
H3 |
1.100 |
1.090 |
C8 |
H81 |
1.101 |
1.091 |
C8 |
H82 |
1.100 |
1.090 |
C8 |
H83 |
1.100 |
1.089 |
N2 |
HN2 |
1.000 |
0.971 |
C13 |
H13 |
1.100 |
1.090 |
C11 |
H111 |
1.100 |
1.090 |
C11 |
H112 |
1.100 |
1.090 |
C11 |
H113 |
1.100 |
1.090 |
C12 |
H121 |
1.100 |
1.090 |
C12 |
H122 |
1.100 |
1.090 |
O6B |
HO6B |
0.950 |
0.966 |
O3 |
HO3 |
0.950 |
0.967 |
Bond Angles for 0HX
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C8 |
C7 |
O6 |
120.8 |
120.0 |
C12 |
C11 |
H111 |
109.5 |
109.5 |
C12 |
C11 |
H112 |
109.5 |
109.5 |
C12 |
C11 |
H113 |
109.5 |
109.5 |
C11 |
C12 |
H121 |
109.6 |
109.5 |
C11 |
C12 |
H122 |
109.6 |
109.5 |
C12 |
C13 |
O1 |
109.7 |
109.5 |
C12 |
C13 |
H13 |
108.6 |
109.5 |
N2 |
C7 |
O6 |
124.7 |
120.0 |
N2 |
C2 |
H2 |
110.7 |
109.7 |
C1 |
O1 |
C13 |
104.0 |
114.0 |
O1 |
C13 |
H13 |
110.2 |
109.5 |
C13 |
C14 |
H141 |
109.0 |
109.5 |
C13 |
C14 |
H142 |
109.0 |
109.5 |
C2 |
C1 |
O1 |
111.9 |
109.7 |
O1 |
C1 |
O5 |
102.5 |
109.7 |
O1 |
C1 |
H1 |
110.9 |
109.7 |
C2 |
C1 |
O5 |
110.9 |
108.3 |
C1 |
C2 |
C3 |
109.7 |
108.2 |
C2 |
C1 |
H1 |
109.5 |
109.7 |
C1 |
C2 |
H2 |
109.9 |
109.7 |
C1 |
O5 |
C5 |
115.7 |
117.6 |
O5 |
C1 |
H1 |
111.0 |
109.7 |
C2 |
C3 |
O3 |
111.3 |
109.5 |
C2 |
C3 |
C4 |
110.9 |
109.5 |
C3 |
C2 |
H2 |
109.8 |
109.7 |
C2 |
C3 |
H3 |
107.8 |
109.5 |
O3 |
C3 |
H3 |
109.1 |
109.4 |
C3 |
O3 |
HO3 |
109.5 |
114.0 |
C3 |
C4 |
H4 |
119.1 |
118.9 |
C15 |
C14 |
H141 |
109.0 |
109.5 |
C15 |
C14 |
H142 |
109.0 |
109.5 |
C14 |
C15 |
H151 |
109.5 |
109.4 |
C14 |
C15 |
H152 |
109.4 |
109.4 |
C14 |
C15 |
H153 |
109.5 |
109.5 |
C5 |
C6 |
O6A |
116.9 |
120.1 |
C5 |
C6 |
O6B |
119.7 |
120.0 |
O6B |
C6 |
O6A |
123.3 |
119.9 |
C6 |
O6B |
HO6B |
109.5 |
117.0 |
H141 |
C14 |
H142 |
109.4 |
109.4 |
H151 |
C15 |
H152 |
109.5 |
109.5 |
H151 |
C15 |
H153 |
109.5 |
109.5 |
H152 |
C15 |
H153 |
109.5 |
109.5 |
H81 |
C8 |
H82 |
109.5 |
109.4 |
H81 |
C8 |
H83 |
109.5 |
109.5 |
H82 |
C8 |
H83 |
109.4 |
109.5 |
H111 |
C11 |
H112 |
109.4 |
109.5 |
H111 |
C11 |
H113 |
109.5 |
109.5 |
H112 |
C11 |
H113 |
109.5 |
109.5 |
H121 |
C12 |
H122 |
109.5 |
109.5 |
Torsion Angles for 0HX
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N2 |
C7 |
C8 |
O6 |
179.6 |
179.9 |
C11 |
C12 |
C13 |
O1 |
188.7 |
65.7 |
C11 |
C12 |
C13 |
H13 |
68.2 |
305.7 |
H111 |
C11 |
C12 |
H112 |
240.0 |
240.0 |
H111 |
C11 |
C12 |
H113 |
120.0 |
120.0 |
H112 |
C11 |
C12 |
H113 |
240.0 |
240.0 |
H121 |
C12 |
C11 |
H122 |
239.8 |
120.0 |
C1 |
O1 |
C13 |
C12 |
263.6 |
255.8 |
O1 |
C13 |
C12 |
H13 |
120.5 |
120.0 |
C12 |
C13 |
C14 |
H141 |
242.8 |
55.2 |
C12 |
C13 |
C14 |
H142 |
2.2 |
295.2 |
C8 |
C7 |
N2 |
O6 |
180.4 |
180.1 |
C7 |
N2 |
C2 |
H2 |
354.2 |
34.4 |
N2 |
C2 |
C1 |
O1 |
292.7 |
302.3 |
N2 |
C2 |
C1 |
O5 |
178.9 |
182.7 |
N2 |
C2 |
C1 |
H1 |
56.1 |
62.9 |
C1 |
C2 |
N2 |
H2 |
121.0 |
120.6 |
N2 |
C2 |
C3 |
O3 |
80.6 |
73.1 |
C3 |
C2 |
N2 |
H2 |
240.0 |
239.4 |
N2 |
C2 |
C3 |
H3 |
320.9 |
313.1 |
C12 |
C13 |
O1 |
H13 |
240.5 |
240.0 |
O1 |
C13 |
C14 |
H141 |
3.6 |
175.2 |
O1 |
C13 |
C14 |
H142 |
123.0 |
55.2 |
C2 |
C1 |
O1 |
C13 |
175.5 |
171.0 |
C13 |
O1 |
C1 |
O5 |
294.4 |
289.9 |
C13 |
O1 |
C1 |
H1 |
52.9 |
50.4 |
C15 |
C14 |
C13 |
H141 |
239.7 |
120.0 |
C15 |
C14 |
C13 |
H142 |
120.3 |
240.0 |
C13 |
C14 |
C15 |
H151 |
180.0 |
175.3 |
C13 |
C14 |
C15 |
H152 |
300.0 |
295.3 |
C13 |
C14 |
C15 |
H153 |
60.0 |
55.3 |
H141 |
C14 |
C13 |
H142 |
240.6 |
120.0 |
C12 |
C13 |
O1 |
C1 |
263.6 |
255.8 |
C1 |
O1 |
C13 |
H13 |
23.1 |
15.8 |
C2 |
C1 |
O1 |
O5 |
241.1 |
241.1 |
O1 |
C1 |
C2 |
C3 |
175.0 |
182.7 |
C2 |
C1 |
O1 |
H1 |
122.6 |
120.6 |
O1 |
C1 |
C2 |
H2 |
54.2 |
63.0 |
O1 |
C1 |
O5 |
C5 |
185.5 |
192.4 |
O5 |
C1 |
O1 |
H1 |
241.4 |
239.4 |
N2 |
C2 |
C1 |
H2 |
238.5 |
239.3 |
O1 |
C1 |
C2 |
O5 |
113.7 |
119.7 |
O1 |
C1 |
C2 |
H1 |
236.6 |
239.5 |
C2 |
C1 |
O5 |
C5 |
305.1 |
312.1 |
O5 |
C1 |
C2 |
H1 |
122.9 |
119.8 |
C1 |
C2 |
C3 |
O3 |
199.1 |
192.8 |
C1 |
C2 |
C3 |
C4 |
321.6 |
312.8 |
C3 |
C2 |
C1 |
H2 |
120.9 |
119.7 |
C1 |
C2 |
C3 |
H3 |
79.4 |
72.8 |
O5 |
C1 |
O1 |
C13 |
294.4 |
289.9 |
C2 |
C1 |
O5 |
O1 |
119.6 |
119.7 |
O1 |
C1 |
O5 |
H1 |
118.5 |
120.5 |
O5 |
C1 |
C2 |
C3 |
61.3 |
63.0 |
C2 |
C1 |
O5 |
H1 |
238.0 |
240.2 |
O5 |
C1 |
C2 |
H2 |
300.4 |
303.3 |
N2 |
C2 |
C3 |
H2 |
120.5 |
120.6 |
C3 |
C2 |
C1 |
O1 |
175.0 |
182.7 |
C3 |
C2 |
C1 |
O5 |
61.3 |
63.0 |
C3 |
C2 |
C1 |
H1 |
298.4 |
303.2 |
C1 |
C2 |
C3 |
H2 |
239.1 |
240.3 |
O3 |
C3 |
C2 |
H3 |
119.7 |
120.0 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
H4 |
191.7 |
197.5 |
C2 |
C3 |
O3 |
C4 |
123.1 |
120.0 |
O3 |
C3 |
C2 |
H2 |
320.1 |
312.5 |
C2 |
C3 |
O3 |
H3 |
241.1 |
240.0 |
O3 |
C3 |
C4 |
H4 |
315.1 |
317.5 |
C2 |
C3 |
C4 |
O3 |
236.7 |
240.0 |
C4 |
C3 |
C2 |
H2 |
82.5 |
72.5 |
C2 |
C3 |
C4 |
H3 |
117.9 |
120.0 |
C13 |
C14 |
C15 |
H141 |
120.3 |
240.0 |
C13 |
C14 |
C15 |
H142 |
239.7 |
120.1 |
H141 |
C14 |
C15 |
H142 |
119.4 |
240.1 |
H151 |
C15 |
C14 |
H152 |
240.0 |
240.1 |
H151 |
C15 |
C14 |
H153 |
120.0 |
120.0 |
H152 |
C15 |
C14 |
H153 |
240.0 |
239.9 |
C5 |
O5 |
C1 |
H1 |
67.0 |
71.9 |
O5 |
C5 |
C6 |
O6A |
12.8 |
180.0 |
O5 |
C5 |
C6 |
O6B |
192.8 |
0.0 |
C1 |
O5 |
C5 |
C4 |
25.9 |
16.7 |
C2 |
C3 |
C4 |
C5 |
11.8 |
17.6 |
C4 |
C5 |
C6 |
O6A |
191.3 |
360.0 |
C4 |
C5 |
C6 |
O6B |
11.3 |
180.0 |
C1 |
O5 |
C5 |
C6 |
204.3 |
196.6 |
O6B |
C6 |
C5 |
O6A |
180.0 |
180.0 |
C5 |
C6 |
O6B |
HO6B |
180.0 |
180.0 |
C5 |
C6 |
O6A |
O6B |
180.0 |
180.0 |
O6A |
C6 |
O6B |
HO6B |
360.0 |
0.0 |
C5 |
C6 |
O6B |
O6A |
180.0 |
180.0 |
C13 |
C14 |
H141 |
H142 |
119.2 |
240.0 |
C15 |
C14 |
H141 |
H142 |
240.9 |
120.0 |
H141 |
C14 |
C15 |
H151 |
59.7 |
295.3 |
H141 |
C14 |
C15 |
H152 |
179.7 |
55.3 |
H141 |
C14 |
C15 |
H153 |
299.7 |
175.3 |
C13 |
C14 |
H142 |
H141 |
240.8 |
120.0 |
C15 |
C14 |
H142 |
H141 |
119.1 |
240.0 |
H142 |
C14 |
C15 |
H151 |
300.3 |
55.3 |
H142 |
C14 |
C15 |
H152 |
60.3 |
175.2 |
H142 |
C14 |
C15 |
H153 |
180.3 |
295.3 |
H151 |
C15 |
C14 |
H141 |
59.7 |
295.3 |
H151 |
C15 |
C14 |
H142 |
300.3 |
55.3 |
C14 |
C15 |
H151 |
H152 |
120.0 |
119.9 |
C14 |
C15 |
H151 |
H153 |
240.0 |
240.0 |
H152 |
C15 |
H151 |
H153 |
120.0 |
120.1 |
H152 |
C15 |
C14 |
H141 |
179.7 |
55.3 |
H152 |
C15 |
C14 |
H142 |
60.3 |
175.2 |
C14 |
C15 |
H152 |
H151 |
240.0 |
240.1 |
C14 |
C15 |
H152 |
H153 |
120.0 |
120.0 |
H151 |
C15 |
H152 |
H153 |
240.0 |
239.9 |
H153 |
C15 |
C14 |
H141 |
299.7 |
175.3 |
H153 |
C15 |
C14 |
H142 |
180.3 |
295.3 |
C14 |
C15 |
H153 |
H151 |
120.0 |
120.0 |
C14 |
C15 |
H153 |
H152 |
240.0 |
240.0 |
H151 |
C15 |
H153 |
H152 |
120.0 |
120.0 |
H1 |
C1 |
O1 |
C13 |
52.9 |
50.4 |
C2 |
C1 |
H1 |
O1 |
236.0 |
239.4 |
O1 |
C1 |
H1 |
O5 |
246.8 |
239.5 |
C2 |
C1 |
H1 |
O5 |
122.8 |
118.9 |
H1 |
C1 |
C2 |
C3 |
298.4 |
303.2 |
H1 |
C1 |
C2 |
H2 |
177.5 |
183.5 |
H1 |
C1 |
O5 |
C5 |
67.0 |
71.9 |
H2 |
C2 |
C1 |
O1 |
54.2 |
63.0 |
H2 |
C2 |
C1 |
O5 |
300.4 |
303.3 |
C1 |
C2 |
H2 |
C3 |
120.8 |
118.8 |
H2 |
C2 |
C1 |
H1 |
177.5 |
183.5 |
H2 |
C2 |
C3 |
O3 |
320.1 |
312.5 |
H2 |
C2 |
C3 |
C4 |
82.5 |
72.5 |
H2 |
C2 |
C3 |
H3 |
200.4 |
192.5 |
C2 |
C3 |
H3 |
O3 |
121.0 |
120.0 |
C2 |
C3 |
H3 |
C4 |
240.2 |
240.0 |
H3 |
C3 |
C2 |
H2 |
200.4 |
192.5 |
H3 |
C3 |
O3 |
HO3 |
298.9 |
299.9 |
H3 |
C3 |
C4 |
H4 |
73.9 |
77.5 |
H81 |
C8 |
C7 |
O6 |
0.0 |
0.0 |
H82 |
C8 |
H81 |
H83 |
120.0 |
120.1 |
H82 |
C8 |
C7 |
O6 |
120.0 |
120.0 |
H81 |
C8 |
H82 |
H83 |
240.0 |
240.0 |
H83 |
C8 |
C7 |
O6 |
240.0 |
240.1 |
H81 |
C8 |
H83 |
H82 |
120.0 |
120.0 |
HN2 |
N2 |
C7 |
O6 |
178.9 |
180.0 |
HN2 |
N2 |
C2 |
H2 |
174.2 |
214.3 |
C12 |
C13 |
H13 |
O1 |
120.2 |
120.0 |
H13 |
C13 |
C14 |
H141 |
124.1 |
295.1 |
H13 |
C13 |
C14 |
H142 |
243.5 |
175.2 |
C12 |
C11 |
H111 |
H112 |
120.0 |
120.0 |
C12 |
C11 |
H111 |
H113 |
240.0 |
240.0 |
H111 |
C11 |
C12 |
H121 |
299.9 |
300.7 |
H111 |
C11 |
C12 |
H122 |
60.1 |
180.7 |
H112 |
C11 |
H111 |
H113 |
120.0 |
120.0 |
C12 |
C11 |
H112 |
H111 |
240.0 |
240.0 |
C12 |
C11 |
H112 |
H113 |
120.0 |
120.0 |
H112 |
C11 |
C12 |
H121 |
59.9 |
60.7 |
H112 |
C11 |
C12 |
H122 |
180.1 |
300.7 |
H111 |
C11 |
H112 |
H113 |
240.0 |
240.0 |
C12 |
C11 |
H113 |
H111 |
120.0 |
120.0 |
C12 |
C11 |
H113 |
H112 |
240.0 |
240.0 |
H113 |
C11 |
C12 |
H121 |
179.9 |
180.7 |
H113 |
C11 |
C12 |
H122 |
300.1 |
60.7 |
H111 |
C11 |
H113 |
H112 |
120.0 |
120.0 |
H121 |
C12 |
C11 |
H111 |
299.9 |
300.7 |
H121 |
C12 |
C11 |
H112 |
59.9 |
60.7 |
H121 |
C12 |
C11 |
H113 |
179.9 |
180.7 |
C11 |
C12 |
H121 |
H122 |
120.3 |
240.0 |
H121 |
C12 |
C13 |
O1 |
68.8 |
185.7 |
H121 |
C12 |
C13 |
H13 |
308.3 |
65.7 |
H122 |
C12 |
C11 |
H111 |
60.1 |
180.7 |
H122 |
C12 |
C11 |
H112 |
180.1 |
300.7 |
H122 |
C12 |
C11 |
H113 |
300.1 |
60.7 |
C11 |
C12 |
H122 |
H121 |
239.7 |
120.0 |
H122 |
C12 |
C13 |
O1 |
308.5 |
305.7 |
H122 |
C12 |
C13 |
H13 |
188.1 |
185.7 |
HO6B |
O6B |
C6 |
O6A |
360.0 |
0.0 |
HO3 |
O3 |
C3 |
H3 |
298.9 |
299.9 |