PDB Chemical Component 0G4

Ideal Model

Chemical Description

Name [[[[(2R,5S)-5-(4-azanyl-5-fluoranyl-2-oxidanylidene-pyrimidin-1-yl)-1,3-oxathiolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy -oxidanyl-phosphoryl]amino]phosphonic acid
Synonyms dCTP analog
Formula C8 H14 F N4 O11 P3 S
Formal charge 0
Molecular weight 486.202 g/mol
Component type NON-POLYMER

Chemical features

Atom count 42
Chiral atom count 2
Chiral atoms C1' C4'
Bond count 43
Aromatic bond count 0

Chemical Identifiers

Systematic name (OpenEye OEToolkits) [[[[(2R,5S)-5-(4-azanyl-5-fluoranyl-2-oxidanylidene-pyrimidin-1-yl)-1,3-oxathiolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]amino]phosphonic acid

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC(=O)N(C=C1F)[C@@H]2CS[C@H](CO[P](O)(=O)O[P](O)(=O)N[P](O)(O)=O)O2
SMILES (CACTVS) NC1=NC(=O)N(C=C1F)[CH]2CS[CH](CO[P](O)(=O)O[P](O)(=O)N[P](O)(O)=O)O2
Stereo SMILES (OpenEye) C1[C@H](O[C@H](S1)COP(=O)(O)OP(=O)(NP(=O)(O)O)O)N2C=C(C(=NC2=O)N)F
InChI descriptor InChI=1S/C8H14FN4O11P3S/c9-4-1-13(8(14)11-7(4)10)5-3-28-6(23-5)2-22-27(20,21)24-26(18,19)12-25(15,16)17/h1,5-6H,2-3H2,(H,20,21)(H2,10,11,14)(H4,12,15,16,17,18,19)/t5-,6+/m0/s1
InChIKey descriptor LBSQECIRXSOKHJ-NTSWFWBYSA-N

Status Information

Last modified 2020-06-17
Created 2012-01-06
Release status REL
Model PDB code 3VCS
Processing site RCSB