PDB Chemical Component 0E5
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0E5
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C2 |
1.526 |
1.530 |
| C2 |
C3 |
1.551 |
1.530 |
| C |
O |
1.250 |
1.208 |
| C |
CA |
1.569 |
1.507 |
| C4 |
C3 |
1.558 |
1.529 |
| C3 |
CA |
1.558 |
1.530 |
| CA |
N |
1.465 |
1.469 |
| C1 |
H11 |
1.100 |
1.090 |
| C1 |
H12 |
1.100 |
1.091 |
| C1 |
H13 |
1.100 |
1.090 |
| C2 |
H4 |
1.100 |
1.090 |
| C2 |
H5 |
1.100 |
1.090 |
| C4 |
H6 |
1.100 |
1.090 |
| C4 |
H7 |
1.100 |
1.090 |
| C4 |
H8 |
1.100 |
1.090 |
| N |
H |
1.000 |
1.010 |
| CA |
HA |
1.100 |
1.090 |
| C |
OXT |
|
1.342 |
| OXT |
HXT |
|
0.967 |
| N |
H2 |
1.000 |
1.009 |
| C3 |
O3 |
|
1.429 |
| O3 |
H9 |
|
0.967 |
Bond Angles for 0E5
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
C2 |
C3 |
114.5 |
109.4 |
| C2 |
C1 |
H11 |
109.5 |
109.5 |
| C2 |
C1 |
H12 |
109.5 |
109.5 |
| C2 |
C1 |
H13 |
109.5 |
109.5 |
| C1 |
C2 |
H4 |
108.2 |
109.4 |
| C1 |
C2 |
H5 |
108.2 |
109.5 |
| C2 |
C3 |
CA |
105.6 |
109.4 |
| C3 |
C2 |
H4 |
108.2 |
109.5 |
| C3 |
C2 |
H5 |
108.2 |
109.5 |
| C2 |
C3 |
O3 |
|
109.5 |
| O |
C |
OXT |
|
120.0 |
| C |
CA |
HA |
101.6 |
109.5 |
| C4 |
C3 |
CA |
113.8 |
109.5 |
| C4 |
C3 |
O3 |
|
109.5 |
| C3 |
CA |
N |
110.8 |
109.5 |
| C3 |
CA |
HA |
101.7 |
109.5 |
| CA |
C3 |
O3 |
|
109.5 |
| CA |
N |
H |
109.5 |
110.9 |
| CA |
N |
H2 |
109.5 |
111.0 |
| H11 |
C1 |
H12 |
109.5 |
109.5 |
| H11 |
C1 |
H13 |
109.4 |
109.5 |
| H12 |
C1 |
H13 |
109.5 |
109.4 |
| H4 |
C2 |
H5 |
109.4 |
109.5 |
| H6 |
C4 |
H7 |
109.5 |
109.5 |
| H6 |
C4 |
H8 |
109.5 |
109.5 |
| H7 |
C4 |
H8 |
109.5 |
109.4 |
| H |
N |
H2 |
109.4 |
111.0 |
| C |
OXT |
HXT |
|
117.0 |
| C3 |
O3 |
H9 |
|
114.0 |
Torsion Angles for 0E5
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
C2 |
C3 |
CA |
152.6 |
180.0 |
| C3 |
C2 |
C1 |
H4 |
239.2 |
240.0 |
| C3 |
C2 |
C1 |
H5 |
120.8 |
120.0 |
| C1 |
C2 |
C3 |
O3 |
|
299.9 |
| H11 |
C1 |
C2 |
H12 |
240.0 |
240.0 |
| H11 |
C1 |
C2 |
H13 |
120.0 |
120.0 |
| H12 |
C1 |
C2 |
H13 |
240.0 |
240.1 |
| H4 |
C2 |
C1 |
H5 |
241.5 |
240.0 |
| C3 |
C2 |
C1 |
H11 |
180.0 |
300.0 |
| C3 |
C2 |
C1 |
H12 |
300.0 |
60.1 |
| C3 |
C2 |
C1 |
H13 |
60.0 |
180.0 |
| C1 |
C2 |
C3 |
H4 |
120.7 |
119.9 |
| C1 |
C2 |
C3 |
H5 |
239.2 |
240.0 |
| C4 |
C3 |
C2 |
CA |
121.9 |
240.0 |
| C4 |
C3 |
C2 |
O3 |
|
120.0 |
| C2 |
C3 |
CA |
N |
151.7 |
185.0 |
| C2 |
C3 |
CA |
HA |
260.0 |
305.0 |
| CA |
C3 |
C2 |
O3 |
|
240.1 |
| H4 |
C2 |
C3 |
H5 |
118.5 |
120.0 |
| C2 |
C3 |
O3 |
H9 |
|
300.0 |
| O |
C |
CA |
HA |
6.9 |
219.9 |
| O |
C |
OXT |
HXT |
|
0.0 |
| C3 |
CA |
C |
HA |
248.2 |
240.0 |
| C |
CA |
C3 |
O3 |
|
305.0 |
| C |
CA |
N |
H |
180.0 |
60.0 |
| C |
CA |
N |
H2 |
300.0 |
183.9 |
| C2 |
C3 |
C4 |
CA |
243.3 |
120.0 |
| C4 |
C3 |
C2 |
H4 |
153.8 |
300.0 |
| C4 |
C3 |
C2 |
H5 |
35.3 |
180.0 |
| C2 |
C3 |
C4 |
O3 |
|
240.0 |
| C4 |
C3 |
CA |
N |
33.8 |
305.0 |
| C4 |
C3 |
CA |
HA |
142.1 |
65.0 |
| CA |
C3 |
C4 |
O3 |
|
120.0 |
| C4 |
C3 |
O3 |
H9 |
|
180.0 |
| CA |
C3 |
C2 |
H4 |
31.9 |
60.1 |
| CA |
C3 |
C2 |
H5 |
273.4 |
300.0 |
| C2 |
C3 |
CA |
O3 |
|
120.0 |
| C |
CA |
C3 |
HA |
111.7 |
120.0 |
| C4 |
C3 |
CA |
O3 |
|
240.0 |
| C3 |
CA |
N |
H |
37.0 |
300.0 |
| C3 |
CA |
N |
H2 |
157.0 |
63.9 |
| CA |
C3 |
O3 |
H9 |
|
60.0 |
| C3 |
CA |
N |
HA |
107.8 |
120.0 |
| N |
CA |
C3 |
O3 |
|
65.0 |
| H |
N |
CA |
H2 |
240.0 |
236.1 |
| H11 |
C1 |
C2 |
C3 |
180.0 |
300.0 |
| C2 |
C1 |
H11 |
H12 |
120.0 |
120.0 |
| C2 |
C1 |
H11 |
H13 |
240.0 |
240.0 |
| H11 |
C1 |
C2 |
H4 |
300.8 |
60.0 |
| H11 |
C1 |
C2 |
H5 |
59.2 |
180.0 |
| H12 |
C1 |
H11 |
H13 |
120.0 |
120.0 |
| H12 |
C1 |
C2 |
C3 |
300.0 |
60.1 |
| C2 |
C1 |
H12 |
H11 |
239.9 |
240.0 |
| C2 |
C1 |
H12 |
H13 |
120.0 |
119.9 |
| H12 |
C1 |
C2 |
H4 |
60.8 |
180.1 |
| H12 |
C1 |
C2 |
H5 |
179.3 |
300.0 |
| H11 |
C1 |
H12 |
H13 |
240.0 |
240.0 |
| H13 |
C1 |
C2 |
C3 |
60.0 |
180.0 |
| C2 |
C1 |
H13 |
H11 |
120.0 |
120.0 |
| C2 |
C1 |
H13 |
H12 |
240.0 |
240.1 |
| H13 |
C1 |
C2 |
H4 |
180.8 |
300.0 |
| H13 |
C1 |
C2 |
H5 |
299.3 |
60.0 |
| H11 |
C1 |
H13 |
H12 |
120.0 |
120.0 |
| C1 |
C2 |
H4 |
C3 |
235.4 |
240.1 |
| H4 |
C2 |
C1 |
H11 |
300.8 |
60.0 |
| H4 |
C2 |
C1 |
H12 |
60.8 |
180.1 |
| H4 |
C2 |
C1 |
H13 |
180.8 |
300.0 |
| C1 |
C2 |
H4 |
H5 |
117.7 |
120.0 |
| H4 |
C2 |
C3 |
CA |
31.9 |
60.1 |
| C3 |
C2 |
H4 |
H5 |
242.3 |
239.9 |
| H4 |
C2 |
C3 |
O3 |
|
180.0 |
| C1 |
C2 |
H5 |
C3 |
124.6 |
120.0 |
| H5 |
C2 |
C1 |
H11 |
59.2 |
180.0 |
| H5 |
C2 |
C1 |
H12 |
179.3 |
300.0 |
| H5 |
C2 |
C1 |
H13 |
299.3 |
60.0 |
| C1 |
C2 |
H5 |
H4 |
242.3 |
240.0 |
| H5 |
C2 |
C3 |
CA |
273.4 |
300.0 |
| C3 |
C2 |
H5 |
H4 |
117.7 |
120.0 |
| H5 |
C2 |
C3 |
O3 |
|
60.0 |
| H6 |
C4 |
C3 |
CA |
296.7 |
300.0 |
| H6 |
C4 |
C3 |
O3 |
|
180.0 |
| H7 |
C4 |
H6 |
H8 |
120.0 |
120.0 |
| H7 |
C4 |
C3 |
CA |
56.7 |
60.0 |
| H7 |
C4 |
C3 |
O3 |
|
300.0 |
| H6 |
C4 |
H7 |
H8 |
240.0 |
240.0 |
| H8 |
C4 |
C3 |
CA |
176.7 |
180.0 |
| H8 |
C4 |
C3 |
O3 |
|
60.0 |
| H6 |
C4 |
H8 |
H7 |
120.0 |
120.0 |
| CA |
N |
H |
H2 |
120.0 |
123.9 |
| C3 |
CA |
HA |
N |
245.3 |
240.0 |
| HA |
CA |
C3 |
O3 |
|
185.0 |
| HA |
CA |
N |
H |
289.2 |
180.0 |
| HA |
CA |
N |
H2 |
49.2 |
303.9 |
| OXT |
C |
CA |
HA |
|
40.0 |
| CA |
N |
H2 |
H |
240.0 |
236.2 |
| C2 |
C3 |
O3 |
CA |
|
240.1 |
| O3 |
C3 |
C2 |
H4 |
|
180.0 |
| O3 |
C3 |
C2 |
H5 |
|
60.0 |
| C4 |
C3 |
O3 |
CA |
|
120.0 |
| O3 |
C3 |
CA |
N |
|
65.0 |
| O3 |
C3 |
CA |
HA |
|
185.0 |