PDB Chemical Component 0DN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 0DN

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O3	C7	1.249	1.218
N2	C7	1.357	1.348
N2	C6	1.350	1.346
O4	C6	1.256	1.216
C7	C8	1.488	1.415
C6	N1	1.421	1.346
C8	C9	1.378	1.350
C8	C10	1.507	1.507
N1	C9	1.355	1.368
N1	C4	1.464	1.465
C4	O1	1.411	1.445
C4	C3	1.542	1.545
O1	C1	1.420	1.444
C3	C2	1.524	1.545
O2	C2	1.441	1.429
C1	C2	1.532	1.545
C1	C5	1.530	1.531
C5	F1	1.370	1.399
N2	H1	1.000	0.970
C10	H2	1.100	1.089
C10	H3	1.100	1.090
C10	H4	1.100	1.091
C9	H5	1.080	1.080
C4	H6	1.100	1.089
C3	H7	1.100	1.090
C3	H8	1.100	1.090
C2	H9	1.100	1.090
O2	H10	0.950	0.968
C1	H11	1.100	1.090
C5	H12	1.100	1.090
C5	H13	1.100	1.090

Bond Angles for 0DN

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O3	C7	C8	119.2	120.3
N2	C7	C8	119.7	119.4
C7	N2	H1	119.6	119.9
N2	C6	N1	120.3	120.9
O4	C6	N1	118.2	119.5
C7	C8	C9	117.7	119.1
C7	C8	C10	122.8	120.5
C6	N1	C9	121.0	120.6
C6	N1	C4	118.2	119.7
C10	C8	C9	119.5	120.4
C8	C9	H5	119.8	120.2
C8	C10	H2	109.5	109.5
C8	C10	H3	109.4	109.5
C8	C10	H4	109.5	109.5
N1	C9	H5	119.7	120.1
N1	C4	O1	106.3	110.4
N1	C4	C3	118.7	110.4
N1	C4	H6	108.3	110.3
C3	C4	O1	106.7	104.8
C4	O1	C1	111.2	105.3
O1	C4	H6	109.1	110.4
C4	C3	C2	103.0	104.1
C3	C4	H6	107.4	110.5
C4	C3	H7	111.1	110.5
C4	C3	H8	111.1	110.5
O1	C1	C5	108.9	110.4
O1	C1	H11	109.0	110.4
C2	C3	H7	111.1	110.5
C2	C3	H8	111.0	110.5
C3	C2	H9	111.5	110.6
O2	C2	H9	112.8	110.5
C1	C2	H9	111.4	110.5
C1	C5	F1	110.0	109.4
C5	C1	H11	107.6	110.4
C1	C5	H12	109.3	109.5
C1	C5	H13	109.3	109.4
F1	C5	H12	109.4	109.5
F1	C5	H13	109.4	109.5
H2	C10	H3	109.5	109.5
H2	C10	H4	109.5	109.5
H3	C10	H4	109.5	109.4
H7	C3	H8	109.5	110.6
H12	C5	H13	109.5	109.5

Torsion Angles for 0DN

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N2	C7	O3	C8	181.4	179.9
O3	C7	N2	H1	0.4	0.0
O3	C7	C8	C9	179.9	179.9
O3	C7	C8	C10	1.5	360.0
O3	C7	N2	C8	178.6	180.1
C7	N2	C6	N1	357.4	0.2
N2	C7	C8	C9	358.5	0.0
N2	C7	C8	C10	180.2	180.0
O4	C6	N2	N1	180.5	179.8
N2	C6	N1	C9	3.2	359.5
N2	C6	N1	C4	179.4	179.8
N2	C6	O4	N1	179.6	180.2
O4	C6	N1	C9	182.7	179.8
O4	C6	N1	C4	359.0	0.0
C8	C7	N2	H1	181.8	180.0
C10	C8	C7	C9	181.6	180.0
C7	C8	C9	H5	182.0	180.0
C7	C8	C10	H2	180.0	360.0
C7	C8	C10	H3	300.0	120.0
C7	C8	C10	H4	60.0	240.0
C6	N1	C9	H5	177.1	180.3
C6	N1	C4	O1	240.5	53.5
C6	N1	C4	C3	120.4	298.2
C6	N1	C4	H6	357.6	175.8
C7	C8	C9	C10	181.6	180.0
C6	N1	C9	C8	357.1	0.5
C9	C8	C10	H2	1.7	180.0
C9	C8	C10	H3	121.7	300.1
C9	C8	C10	H4	241.7	60.0
N1	C9	C8	H5	180.0	179.8
C7	C8	C10	C9	178.3	180.0
C10	C8	C9	H5	0.5	359.9
H2	C10	C8	H3	240.0	239.9
H2	C10	C8	H4	120.0	120.0
H3	C10	C8	H4	240.0	240.1
C6	N1	C9	C4	176.2	180.2
C8	C9	N1	H5	180.0	180.2
C6	N1	C4	C9	183.7	179.8
C4	N1	C9	H5	0.9	0.0
C3	C4	N1	O1	239.9	244.7
N1	C4	O1	C1	213.6	200.6
O1	C4	N1	H6	242.9	237.7
N1	C4	C3	C2	146.3	142.8
C3	C4	N1	H6	122.7	122.4
N1	C4	C3	H7	265.2	261.5
N1	C4	C3	H8	27.4	24.2
N1	C4	O1	C3	232.4	241.2
N1	C4	O1	H6	116.6	122.2
O1	C4	C3	C2	26.3	24.0
C3	C4	O1	H6	244.3	241.1
O1	C4	C3	H7	145.3	142.7
O1	C4	C3	H8	267.4	265.4
C4	O1	C1	C5	129.8	159.4
C4	O1	C1	H11	246.8	281.7
N1	C4	C3	O1	119.9	118.8
N1	C4	C3	H6	236.8	237.7
C3	C4	O1	C1	341.3	319.4
O1	C4	C3	H6	116.9	118.9
C2	C3	C4	H7	241.1	241.3
C2	C3	C4	H8	118.9	118.6
C4	C3	C2	H9	215.8	241.4
H7	C3	C4	H8	237.9	237.3
C1	O1	C4	H6	97.0	78.4
O1	C1	C2	H9	134.4	94.6
O1	C1	C5	F1	287.1	66.5
C5	C1	O1	H11	243.0	237.7
O1	C1	C5	H12	47.2	186.5
O1	C1	C5	H13	167.0	306.5
C2	C3	C4	O1	26.3	24.0
C2	C3	C4	H6	269.5	265.1
C4	C3	C2	H7	118.9	118.7
C4	C3	C2	H8	241.1	241.4
O2	C2	C3	H9	235.3	237.4
C1	C2	C3	H9	120.5	118.6
H7	C3	C2	H8	122.1	122.7
O2	C2	C3	H7	332.2	0.1
O2	C2	C3	H8	210.0	237.4
C3	C2	O2	H9	123.9	122.7
C1	C2	O2	H9	236.5	237.3
C4	O1	C1	C2	3.1	40.6
C1	C2	C3	H7	217.3	241.3
C1	C2	C3	H8	95.2	118.7
C3	C2	C1	H9	239.5	241.3
O2	C2	C1	H9	124.4	122.7
O1	C1	C5	H11	117.9	122.3
C5	C1	C2	H9	12.1	335.8
F1	C5	C1	H12	239.9	240.0
F1	C5	C1	H13	120.1	120.0
H12	C5	C1	H13	240.2	240.0
F1	C5	C1	H11	169.2	304.1
C1	C5	F1	H12	120.1	120.0
C1	C5	F1	H13	239.9	240.0
H12	C5	F1	H13	119.8	120.1
H1	N2	C7	C8	181.8	180.0
H1	N2	C6	N1	177.4	180.3
H2	C10	C8	C9	1.7	180.0
C8	C10	H2	H3	120.0	120.0
C8	C10	H2	H4	240.0	240.0
H3	C10	H2	H4	120.0	120.0
H3	C10	C8	C9	121.7	300.1
C8	C10	H3	H2	240.0	240.0
C8	C10	H3	H4	120.0	120.0
H2	C10	H3	H4	240.0	240.0
H4	C10	C8	C9	241.7	60.0
C8	C10	H4	H2	120.0	120.0
C8	C10	H4	H3	240.0	240.0
H2	C10	H4	H3	120.0	120.0
N1	C4	H6	O1	244.7	237.7
N1	C4	H6	C3	129.4	122.3
C3	C4	H6	O1	115.3	115.4
H6	C4	O1	C1	97.0	78.4
H6	C4	C3	C2	269.5	265.1
H6	C4	C3	H7	28.4	23.7
H6	C4	C3	H8	150.6	146.4
H7	C3	C4	O1	145.3	142.7
C4	C3	H7	C2	246.0	245.3
H7	C3	C4	H6	28.4	23.7
C4	C3	H7	H8	123.0	122.7
C2	C3	H7	H8	237.0	237.3
H7	C3	C2	H9	96.9	122.7
H8	C3	C4	O1	267.4	265.4
C4	C3	H8	C2	113.9	114.7
H8	C3	C4	H6	150.6	146.4
C4	C3	H8	H7	237.0	237.3
C2	C3	H8	H7	123.0	122.7
H8	C3	C2	H9	334.7	0.0
H9	C2	C3	H7	96.9	122.7
H9	C2	C3	H8	334.7	0.0
H10	O2	C2	H9	56.1	298.8
O1	C1	H11	C5	242.1	237.7
H11	C1	C2	H9	251.6	213.6
H11	C1	C5	F1	169.2	304.1
H11	C1	C5	H12	289.3	64.1
H11	C1	C5	H13	49.1	184.1
C1	C5	H12	F1	239.5	240.0
H12	C5	C1	H11	289.3	64.1
C1	C5	H12	H13	119.7	120.0
F1	C5	H12	H13	240.2	239.9
C1	C5	H13	F1	120.5	119.9
H13	C5	C1	H11	49.1	184.1
C1	C5	H13	H12	240.3	240.0
F1	C5	H13	H12	119.8	120.1