PDB Chemical Component 0DA

Ideal Model

Chemical Description

Name 2'-DEOXY-L-RIBO-FURANOSYL ADENOSINE-5'-MONOPHOSPHATE
Formula C10 H14 N5 O6 P
Formal charge 0
Molecular weight 331.222 g/mol
Component type L-DNA LINKING

Chemical features

Atom count 36
Chiral atom count 3
Chiral atoms C4' C3' C1'
Observed leaving atoms OP3 HO3' HOP3
Bond count 38
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 9-(2-deoxy-5-O-phosphono-beta-L-erythro-pentofuranosyl)-9H-purin-6-amine
Systematic name (OpenEye OEToolkits) [(2S,3R,5S)-5-(6-aminopurin-9-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n(cnc12)[C@@H]3C[C@@H](O)[C@H](CO[P](O)(O)=O)O3
SMILES (CACTVS) Nc1ncnc2n(cnc12)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(cn2)[C@@H]3C[C@H]([C@@H](O3)COP(=O)(O)O)O)N
InChI descriptor InChI=1S/C10H14N5O6P/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(16)6(21-7)2-20-22(17,18)19/h3-7,16H,1-2H2,(H2,11,12,13)(H2,17,18,19)/t5-,6+,7+/m1/s1
InChIKey descriptor KHWCHTKSEGGWEX-VQVTYTSYSA-N

Status Information

Last modified 2015-05-01
Created 2009-07-27
Release status REL
Replaces A
Processing site RCSB