PDB Chemical Component 0C5
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0C5
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C16 |
C17 |
1.397 |
1.386 |
| C16 |
C15 |
1.389 |
1.381 |
| C17 |
C18 |
1.391 |
1.379 |
| C15 |
C14 |
1.392 |
1.388 |
| C18 |
C19 |
1.394 |
1.397 |
| C14 |
C19 |
1.391 |
1.404 |
| C14 |
N13 |
1.441 |
1.392 |
| C19 |
C20 |
1.511 |
1.432 |
| N13 |
C12 |
1.521 |
1.387 |
| C20 |
N21 |
1.080 |
1.136 |
| C12 |
C22 |
1.406 |
1.396 |
| C12 |
N11 |
1.347 |
1.329 |
| C22 |
C23 |
1.391 |
1.382 |
| O01 |
C02 |
1.254 |
1.216 |
| N11 |
C10 |
1.337 |
1.325 |
| C06 |
C07 |
1.392 |
1.375 |
| C06 |
C03 |
1.401 |
1.399 |
| C23 |
N24 |
1.347 |
1.324 |
| C07 |
C08 |
1.390 |
1.392 |
| C02 |
C03 |
1.482 |
1.474 |
| C02 |
O25 |
1.303 |
1.348 |
| C03 |
C04 |
1.380 |
1.398 |
| C10 |
N24 |
1.339 |
1.325 |
| C10 |
N09 |
1.436 |
1.386 |
| C08 |
N09 |
1.438 |
1.392 |
| C08 |
C05 |
1.392 |
1.392 |
| C04 |
C05 |
1.391 |
1.376 |
| C04 |
H1 |
1.080 |
1.080 |
| C05 |
H2 |
1.080 |
1.081 |
| C06 |
H3 |
1.080 |
1.080 |
| C07 |
H4 |
1.080 |
1.081 |
| N09 |
H5 |
1.000 |
0.970 |
| N13 |
H6 |
1.000 |
0.970 |
| C15 |
H7 |
1.080 |
1.080 |
| C16 |
H8 |
1.079 |
1.080 |
| C17 |
H9 |
1.080 |
1.080 |
| C18 |
H10 |
1.080 |
1.080 |
| C22 |
H11 |
1.080 |
1.079 |
| C23 |
H12 |
1.080 |
1.080 |
| O25 |
H13 |
0.950 |
0.967 |
Bond Angles for 0C5
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C16 |
C17 |
C18 |
119.7 |
120.3 |
| C17 |
C16 |
H8 |
119.6 |
119.8 |
| C16 |
C17 |
H9 |
120.2 |
119.9 |
| C16 |
C15 |
H7 |
120.3 |
119.9 |
| C17 |
C18 |
C19 |
119.3 |
119.9 |
| C18 |
C17 |
H9 |
120.2 |
119.8 |
| C17 |
C18 |
H10 |
120.4 |
120.1 |
| C15 |
C14 |
C19 |
119.6 |
119.7 |
| C14 |
C19 |
C18 |
121.1 |
119.6 |
| C18 |
C19 |
C20 |
118.3 |
120.2 |
| C19 |
C18 |
H10 |
120.3 |
120.0 |
| C14 |
C19 |
C20 |
120.6 |
120.2 |
| C14 |
N13 |
H6 |
119.6 |
120.0 |
| C19 |
C20 |
N21 |
178.7 |
180.0 |
| N13 |
C12 |
C22 |
121.0 |
120.5 |
| C12 |
C22 |
C23 |
120.7 |
118.5 |
| C12 |
C22 |
H11 |
119.7 |
120.8 |
| C22 |
C23 |
N24 |
118.5 |
119.3 |
| C23 |
C22 |
H11 |
119.6 |
120.8 |
| C22 |
C23 |
H12 |
120.7 |
120.3 |
| O01 |
C02 |
C03 |
122.3 |
120.0 |
| O01 |
C02 |
O25 |
120.3 |
120.0 |
| N11 |
C10 |
N24 |
122.5 |
121.6 |
| C06 |
C07 |
C08 |
119.1 |
120.1 |
| C07 |
C06 |
H3 |
119.5 |
120.1 |
| C06 |
C07 |
H4 |
120.4 |
119.9 |
| C10 |
N24 |
C23 |
120.0 |
120.9 |
| N24 |
C23 |
H12 |
120.7 |
120.4 |
| C07 |
C08 |
N09 |
122.9 |
119.9 |
| C08 |
C07 |
H4 |
120.5 |
119.9 |
| C03 |
C02 |
O25 |
117.4 |
120.0 |
| C02 |
C03 |
C04 |
117.4 |
120.1 |
| C02 |
O25 |
H13 |
109.5 |
117.0 |
| C03 |
C04 |
C05 |
118.7 |
119.9 |
| C03 |
C04 |
H1 |
120.7 |
120.0 |
| C10 |
N09 |
H5 |
118.0 |
120.0 |
| C08 |
N09 |
H5 |
117.9 |
120.0 |
| C08 |
C05 |
H2 |
119.1 |
120.0 |
| C05 |
C04 |
H1 |
120.6 |
120.1 |
| C04 |
C05 |
H2 |
119.1 |
120.0 |
Torsion Angles for 0C5
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C17 |
C16 |
C15 |
H7 |
180.2 |
180.1 |
| C16 |
C17 |
C18 |
C19 |
0.4 |
360.0 |
| C18 |
C17 |
C16 |
H9 |
180.0 |
180.1 |
| C16 |
C17 |
C18 |
H10 |
180.4 |
180.0 |
| C16 |
C15 |
C14 |
C19 |
359.9 |
0.0 |
| C18 |
C17 |
C16 |
H8 |
179.7 |
180.0 |
| C16 |
C17 |
C18 |
H9 |
180.0 |
179.9 |
| C14 |
C19 |
C18 |
C17 |
359.6 |
0.1 |
| C17 |
C18 |
C19 |
C20 |
179.6 |
180.3 |
| C19 |
C18 |
C17 |
H10 |
180.0 |
179.9 |
| C15 |
C14 |
C19 |
C18 |
0.2 |
359.9 |
| C15 |
C14 |
C19 |
C20 |
180.2 |
179.7 |
| C15 |
C14 |
N13 |
H6 |
119.2 |
151.9 |
| C19 |
C18 |
C17 |
H9 |
180.4 |
180.0 |
| C17 |
C18 |
C19 |
H10 |
180.0 |
180.1 |
| C14 |
C19 |
C18 |
C20 |
180.0 |
179.7 |
| C18 |
C19 |
C20 |
N21 |
355.2 |
234.9 |
| C17 |
C18 |
C19 |
C14 |
359.6 |
0.1 |
| C18 |
C19 |
C14 |
C20 |
180.0 |
180.3 |
| C14 |
C19 |
C18 |
H10 |
179.6 |
180.0 |
| C19 |
C14 |
N13 |
H6 |
299.3 |
331.6 |
| C14 |
C19 |
C20 |
N21 |
175.2 |
55.1 |
| C14 |
N13 |
C12 |
C22 |
176.9 |
175.6 |
| C14 |
C19 |
C20 |
C18 |
180.0 |
180.3 |
| C20 |
C19 |
C18 |
H10 |
359.6 |
0.2 |
| N13 |
C12 |
C22 |
C23 |
179.7 |
180.0 |
| N13 |
C12 |
C22 |
H11 |
359.7 |
360.0 |
| C12 |
C22 |
C23 |
N24 |
0.4 |
0.0 |
| C23 |
C22 |
C12 |
H11 |
180.0 |
180.0 |
| C12 |
C22 |
C23 |
H12 |
180.4 |
179.9 |
| C12 |
N11 |
C10 |
N24 |
0.5 |
0.1 |
| C12 |
C22 |
C23 |
H11 |
180.0 |
180.0 |
| C10 |
N24 |
C23 |
C22 |
359.9 |
0.0 |
| N24 |
C23 |
C22 |
H12 |
180.0 |
180.1 |
| C03 |
C02 |
O01 |
O25 |
178.3 |
180.3 |
| O01 |
C02 |
C03 |
C04 |
186.6 |
0.0 |
| O01 |
C02 |
O25 |
H13 |
0.0 |
0.0 |
| N11 |
C10 |
N24 |
C23 |
359.6 |
359.9 |
| N11 |
C10 |
N09 |
H5 |
207.6 |
354.0 |
| C06 |
C07 |
C08 |
N09 |
180.4 |
180.1 |
| C08 |
C07 |
C06 |
H4 |
180.0 |
180.0 |
| C06 |
C03 |
C02 |
O25 |
183.8 |
0.0 |
| C06 |
C03 |
C04 |
H1 |
180.8 |
180.2 |
| N24 |
C23 |
C22 |
H11 |
180.5 |
180.0 |
| C22 |
C23 |
N24 |
H12 |
180.0 |
179.9 |
| C08 |
C07 |
C06 |
H3 |
180.5 |
180.1 |
| C06 |
C07 |
C08 |
H4 |
180.0 |
180.0 |
| C07 |
C08 |
N09 |
H5 |
159.9 |
139.0 |
| C07 |
C08 |
C05 |
H2 |
180.6 |
179.8 |
| O01 |
C02 |
C03 |
O25 |
181.6 |
179.7 |
| C03 |
C02 |
O25 |
H13 |
181.6 |
179.7 |
| C02 |
C03 |
C04 |
C05 |
179.6 |
180.0 |
| C02 |
C03 |
C04 |
H1 |
359.6 |
359.9 |
| O01 |
C02 |
O25 |
C03 |
178.4 |
180.3 |
| O25 |
C02 |
C03 |
C04 |
5.0 |
180.3 |
| C04 |
C03 |
C02 |
O25 |
5.0 |
180.3 |
| C05 |
C04 |
C03 |
H1 |
180.0 |
180.0 |
| C03 |
C04 |
C05 |
H2 |
179.2 |
180.0 |
| C22 |
C23 |
N24 |
C10 |
359.9 |
0.0 |
| C10 |
N24 |
C23 |
H12 |
179.9 |
180.1 |
| N24 |
C10 |
N09 |
H5 |
26.7 |
173.7 |
| C08 |
N09 |
C10 |
H5 |
180.0 |
180.1 |
| N09 |
C08 |
C07 |
H4 |
0.4 |
0.1 |
| C10 |
N09 |
C08 |
H5 |
180.0 |
179.9 |
| N09 |
C08 |
C05 |
H2 |
359.8 |
359.9 |
| C08 |
C05 |
C04 |
H1 |
179.2 |
180.0 |
| C04 |
C05 |
C08 |
H2 |
180.0 |
180.0 |
| C03 |
C04 |
C05 |
H1 |
180.0 |
180.0 |
| C08 |
C05 |
C04 |
H2 |
180.0 |
180.0 |
| C03 |
C04 |
H1 |
C05 |
180.0 |
180.0 |
| H1 |
C04 |
C05 |
H2 |
359.2 |
360.0 |
| H2 |
C05 |
C04 |
H1 |
359.2 |
360.0 |
| H3 |
C06 |
C07 |
C08 |
180.5 |
180.1 |
| H3 |
C06 |
C07 |
H4 |
0.5 |
0.0 |
| C06 |
C07 |
H4 |
C08 |
180.0 |
180.0 |
| H4 |
C07 |
C06 |
H3 |
0.5 |
0.0 |
| H4 |
C07 |
C08 |
N09 |
0.4 |
0.1 |
| H6 |
N13 |
C12 |
C22 |
356.9 |
355.5 |
| H7 |
C15 |
C14 |
C19 |
179.9 |
180.0 |
| H8 |
C16 |
C17 |
C18 |
179.7 |
180.0 |
| H8 |
C16 |
C17 |
H9 |
359.7 |
360.0 |
| H8 |
C16 |
C15 |
H7 |
0.1 |
0.0 |
| C16 |
C17 |
H9 |
C18 |
180.0 |
180.1 |
| H9 |
C17 |
C16 |
H8 |
359.7 |
360.0 |
| H9 |
C17 |
C18 |
C19 |
180.4 |
180.0 |
| H9 |
C17 |
C18 |
H10 |
0.4 |
0.1 |
| C17 |
C18 |
H10 |
C19 |
180.0 |
179.9 |
| H10 |
C18 |
C17 |
H9 |
0.4 |
0.1 |
| H10 |
C18 |
C19 |
C20 |
359.6 |
0.2 |
| C12 |
C22 |
H11 |
C23 |
180.0 |
180.0 |
| H11 |
C22 |
C23 |
N24 |
180.5 |
180.0 |
| H11 |
C22 |
C23 |
H12 |
0.5 |
359.9 |
| C22 |
C23 |
H12 |
N24 |
180.0 |
180.1 |
| H12 |
C23 |
C22 |
H11 |
0.5 |
359.9 |