PDB Chemical Component 0B3
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0B3
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O |
C5 |
1.219 |
1.213 |
C6 |
C5 |
1.502 |
1.508 |
C6 |
C2 |
1.518 |
1.527 |
C5 |
N3 |
1.337 |
1.349 |
C1 |
C2 |
1.521 |
1.529 |
C2 |
C7 |
1.534 |
1.531 |
C2 |
N1 |
1.452 |
1.462 |
C7 |
C8 |
1.528 |
1.531 |
N3 |
C4 |
1.457 |
1.465 |
N3 |
C3 |
1.349 |
1.379 |
C14 |
C13 |
1.395 |
1.382 |
C14 |
C9 |
1.389 |
1.383 |
C13 |
C12 |
1.392 |
1.382 |
N1 |
C3 |
1.262 |
1.297 |
C8 |
C9 |
1.512 |
1.506 |
C3 |
N2 |
1.332 |
1.375 |
C9 |
C10 |
1.391 |
1.383 |
C12 |
C11 |
1.389 |
1.382 |
C10 |
C11 |
1.393 |
1.383 |
C4 |
H1 |
1.100 |
1.090 |
C4 |
H2 |
1.100 |
1.089 |
C4 |
H3 |
1.100 |
1.090 |
N2 |
H4 |
1.000 |
0.969 |
N2 |
H5 |
1.000 |
0.970 |
C6 |
H6 |
1.100 |
1.090 |
C6 |
H7 |
1.100 |
1.090 |
C1 |
H8 |
1.100 |
1.090 |
C1 |
H9 |
1.100 |
1.090 |
C1 |
H10 |
1.100 |
1.090 |
C7 |
H11 |
1.100 |
1.090 |
C7 |
H12 |
1.100 |
1.090 |
C8 |
H13 |
1.100 |
1.090 |
C8 |
H14 |
1.100 |
1.090 |
C14 |
H15 |
1.080 |
1.080 |
C13 |
H16 |
1.080 |
1.080 |
C12 |
H17 |
1.080 |
1.081 |
C11 |
H18 |
1.080 |
1.080 |
C10 |
H19 |
1.080 |
1.080 |
Bond Angles for 0B3
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O |
C5 |
N3 |
122.0 |
120.4 |
C6 |
C2 |
C7 |
108.9 |
109.4 |
C2 |
C6 |
H6 |
109.9 |
109.6 |
C2 |
C6 |
H7 |
109.9 |
109.4 |
C5 |
N3 |
C4 |
118.8 |
120.0 |
C5 |
N3 |
C3 |
119.0 |
120.1 |
C1 |
C2 |
C7 |
109.4 |
109.4 |
C2 |
C7 |
C8 |
110.8 |
109.4 |
C2 |
C7 |
H11 |
109.1 |
109.5 |
C2 |
C7 |
H12 |
109.1 |
109.5 |
C7 |
C8 |
C9 |
111.4 |
109.4 |
C8 |
C7 |
H11 |
109.1 |
109.5 |
C8 |
C7 |
H12 |
109.2 |
109.5 |
C7 |
C8 |
H13 |
109.0 |
109.5 |
C7 |
C8 |
H14 |
109.0 |
109.5 |
C4 |
N3 |
C3 |
122.2 |
119.9 |
N3 |
C4 |
H1 |
109.5 |
109.4 |
N3 |
C4 |
H2 |
109.5 |
109.5 |
N3 |
C4 |
H3 |
109.5 |
109.5 |
N3 |
C3 |
N2 |
119.5 |
119.3 |
C14 |
C13 |
C12 |
120.0 |
120.0 |
C13 |
C14 |
H15 |
119.9 |
120.1 |
C14 |
C13 |
H16 |
120.0 |
120.0 |
C14 |
C9 |
C10 |
119.5 |
120.0 |
C13 |
C12 |
C11 |
120.2 |
120.0 |
C12 |
C13 |
H16 |
120.0 |
120.0 |
C13 |
C12 |
H17 |
119.9 |
120.0 |
C8 |
C9 |
C10 |
119.5 |
120.0 |
C9 |
C8 |
H13 |
109.0 |
109.5 |
C9 |
C8 |
H14 |
109.0 |
109.5 |
C3 |
N2 |
H4 |
120.0 |
120.0 |
C3 |
N2 |
H5 |
120.0 |
120.0 |
C9 |
C10 |
C11 |
120.8 |
120.0 |
C9 |
C10 |
H19 |
119.6 |
120.0 |
C11 |
C12 |
H17 |
119.9 |
120.0 |
C12 |
C11 |
H18 |
120.3 |
120.0 |
C10 |
C11 |
H18 |
120.3 |
120.0 |
H1 |
C4 |
H2 |
109.4 |
109.5 |
H1 |
C4 |
H3 |
109.5 |
109.5 |
H2 |
C4 |
H3 |
109.4 |
109.5 |
H4 |
N2 |
H5 |
120.0 |
120.1 |
H6 |
C6 |
H7 |
109.5 |
109.5 |
H8 |
C1 |
H9 |
109.5 |
109.4 |
H8 |
C1 |
H10 |
109.4 |
109.4 |
H9 |
C1 |
H10 |
109.5 |
109.6 |
H11 |
C7 |
H12 |
109.4 |
109.5 |
H13 |
C8 |
H14 |
109.5 |
109.5 |
Torsion Angles for 0B3
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O |
C5 |
N3 |
C4 |
5.0 |
0.4 |
O |
C5 |
N3 |
C3 |
184.9 |
180.5 |
C1 |
C2 |
C6 |
C7 |
240.5 |
240.1 |
C6 |
C2 |
C7 |
C8 |
160.6 |
180.0 |
C6 |
C2 |
C7 |
H11 |
280.8 |
299.9 |
C6 |
C2 |
C7 |
H12 |
40.4 |
60.0 |
H6 |
C6 |
C2 |
H7 |
120.5 |
120.1 |
C4 |
N3 |
C5 |
C3 |
180.1 |
179.9 |
C5 |
N3 |
C4 |
H1 |
180.0 |
90.1 |
C5 |
N3 |
C4 |
H2 |
300.0 |
210.1 |
C5 |
N3 |
C4 |
H3 |
60.0 |
330.1 |
C5 |
N3 |
C3 |
N2 |
200.2 |
160.6 |
C6 |
C2 |
C1 |
C7 |
119.2 |
119.9 |
C1 |
C2 |
C6 |
H6 |
49.9 |
312.5 |
C1 |
C2 |
C6 |
H7 |
289.4 |
192.4 |
C1 |
C2 |
C7 |
C8 |
280.1 |
299.9 |
C1 |
C2 |
C7 |
H11 |
40.3 |
59.8 |
C1 |
C2 |
C7 |
H12 |
159.8 |
179.9 |
C7 |
C2 |
C6 |
H6 |
169.4 |
72.4 |
C7 |
C2 |
C6 |
H7 |
48.8 |
312.3 |
C2 |
C7 |
C8 |
C9 |
193.0 |
180.0 |
C8 |
C7 |
C2 |
H11 |
239.8 |
240.1 |
C8 |
C7 |
C2 |
H12 |
120.2 |
120.0 |
C2 |
C7 |
C8 |
H13 |
313.3 |
299.9 |
C2 |
C7 |
C8 |
H14 |
72.7 |
60.0 |
H11 |
C7 |
C2 |
H12 |
240.4 |
240.0 |
C2 |
C7 |
C8 |
H11 |
120.2 |
119.9 |
C2 |
C7 |
C8 |
H12 |
239.8 |
240.0 |
C7 |
C8 |
C9 |
C10 |
119.7 |
90.1 |
C9 |
C8 |
C7 |
H13 |
239.7 |
240.0 |
C9 |
C8 |
C7 |
H14 |
120.3 |
120.0 |
H11 |
C7 |
C8 |
H12 |
119.6 |
120.0 |
H13 |
C8 |
C7 |
H14 |
240.6 |
240.0 |
C5 |
N3 |
C4 |
C3 |
179.9 |
180.1 |
C4 |
N3 |
C3 |
N2 |
20.0 |
340.7 |
H1 |
C4 |
N3 |
H2 |
240.0 |
240.0 |
H1 |
C4 |
N3 |
H3 |
120.1 |
120.0 |
H2 |
C4 |
N3 |
H3 |
240.0 |
240.0 |
C5 |
N3 |
C3 |
C4 |
180.1 |
179.9 |
C3 |
N3 |
C4 |
H1 |
0.2 |
270.0 |
C3 |
N3 |
C4 |
H2 |
120.2 |
30.0 |
C3 |
N3 |
C4 |
H3 |
240.1 |
150.0 |
N3 |
C3 |
N2 |
H4 |
181.0 |
359.9 |
N3 |
C3 |
N2 |
H5 |
1.0 |
180.0 |
C13 |
C14 |
C9 |
C10 |
360.0 |
0.3 |
C14 |
C13 |
C12 |
C11 |
0.1 |
-0.0 |
C12 |
C13 |
C14 |
H16 |
180.0 |
180.0 |
C14 |
C13 |
C12 |
H17 |
180.1 |
180.0 |
C8 |
C9 |
C14 |
C10 |
179.9 |
179.8 |
C14 |
C9 |
C8 |
H13 |
179.5 |
150.3 |
C14 |
C9 |
C8 |
H14 |
60.0 |
30.3 |
C14 |
C9 |
C10 |
C11 |
0.1 |
359.6 |
C14 |
C9 |
C10 |
H19 |
180.1 |
179.7 |
C12 |
C13 |
C14 |
H15 |
180.0 |
180.0 |
C14 |
C13 |
C12 |
H16 |
180.0 |
180.0 |
C11 |
C12 |
C13 |
H17 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
H18 |
180.0 |
180.0 |
N1 |
C3 |
N2 |
H4 |
0.0 |
180.0 |
N1 |
C3 |
N2 |
H5 |
180.0 |
0.1 |
C9 |
C8 |
C7 |
H11 |
72.8 |
60.0 |
C9 |
C8 |
C7 |
H12 |
313.2 |
300.0 |
C7 |
C8 |
C9 |
H13 |
120.3 |
120.0 |
C7 |
C8 |
C9 |
H14 |
239.7 |
240.0 |
C14 |
C9 |
C8 |
C10 |
180.1 |
180.2 |
C8 |
C9 |
C10 |
C11 |
180.2 |
179.8 |
C8 |
C9 |
C10 |
H19 |
0.2 |
359.9 |
H13 |
C8 |
C9 |
H14 |
119.4 |
120.0 |
H4 |
N2 |
C3 |
H5 |
180.0 |
179.9 |
C10 |
C9 |
C8 |
H13 |
359.4 |
330.1 |
C10 |
C9 |
C8 |
H14 |
239.9 |
210.1 |
C9 |
C10 |
C11 |
H18 |
179.9 |
180.2 |
C11 |
C12 |
C13 |
H16 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
H17 |
180.0 |
180.0 |
C9 |
C10 |
C11 |
C12 |
359.9 |
0.4 |
C10 |
C11 |
C12 |
H18 |
180.0 |
179.8 |
C9 |
C10 |
C11 |
H19 |
180.0 |
180.1 |
C10 |
C11 |
C12 |
H17 |
180.0 |
179.9 |
C12 |
C11 |
C10 |
H18 |
180.0 |
180.2 |
H1 |
C4 |
N3 |
C3 |
0.2 |
270.0 |
N3 |
C4 |
H1 |
H2 |
120.0 |
120.0 |
N3 |
C4 |
H1 |
H3 |
240.0 |
240.0 |
H2 |
C4 |
H1 |
H3 |
120.0 |
120.0 |
H2 |
C4 |
N3 |
C3 |
120.2 |
30.0 |
N3 |
C4 |
H2 |
H1 |
240.0 |
240.0 |
N3 |
C4 |
H2 |
H3 |
120.0 |
120.0 |
H1 |
C4 |
H2 |
H3 |
240.0 |
240.0 |
H3 |
C4 |
N3 |
C3 |
240.1 |
150.0 |
N3 |
C4 |
H3 |
H1 |
120.1 |
119.9 |
N3 |
C4 |
H3 |
H2 |
240.0 |
240.0 |
H1 |
C4 |
H3 |
H2 |
120.0 |
120.0 |
C3 |
N2 |
H4 |
H5 |
180.0 |
180.1 |
C3 |
N2 |
H5 |
H4 |
180.0 |
179.9 |
H6 |
C6 |
C2 |
C7 |
169.4 |
72.4 |
C2 |
C6 |
H6 |
H7 |
239.2 |
240.0 |
H7 |
C6 |
C2 |
C7 |
48.8 |
312.3 |
C2 |
C6 |
H7 |
H6 |
120.8 |
120.1 |
H8 |
C1 |
C2 |
C7 |
60.8 |
300.1 |
H9 |
C1 |
H8 |
H10 |
120.0 |
120.1 |
H9 |
C1 |
C2 |
C7 |
180.8 |
60.1 |
H8 |
C1 |
H9 |
H10 |
240.0 |
240.0 |
H10 |
C1 |
C2 |
C7 |
300.8 |
180.2 |
H8 |
C1 |
H10 |
H9 |
120.0 |
120.0 |
C2 |
C7 |
H11 |
C8 |
238.8 |
240.1 |
C2 |
C7 |
H11 |
H12 |
119.4 |
120.0 |
H11 |
C7 |
C8 |
C9 |
72.8 |
60.0 |
C8 |
C7 |
H11 |
H12 |
240.6 |
240.0 |
H11 |
C7 |
C8 |
H13 |
193.1 |
180.0 |
H11 |
C7 |
C8 |
H14 |
312.5 |
300.0 |
C2 |
C7 |
H12 |
C8 |
121.2 |
120.0 |
C2 |
C7 |
H12 |
H11 |
240.6 |
240.0 |
H12 |
C7 |
C8 |
C9 |
313.2 |
300.0 |
C8 |
C7 |
H12 |
H11 |
119.4 |
120.0 |
H12 |
C7 |
C8 |
H13 |
73.5 |
60.0 |
H12 |
C7 |
C8 |
H14 |
192.9 |
180.0 |
C7 |
C8 |
H13 |
C9 |
238.3 |
240.1 |
H13 |
C8 |
C7 |
H11 |
193.1 |
180.0 |
H13 |
C8 |
C7 |
H12 |
73.5 |
60.0 |
C7 |
C8 |
H13 |
H14 |
119.1 |
120.0 |
H13 |
C8 |
C9 |
C10 |
359.4 |
330.1 |
C9 |
C8 |
H13 |
H14 |
240.9 |
240.0 |
C7 |
C8 |
H14 |
C9 |
121.7 |
120.0 |
H14 |
C8 |
C7 |
H11 |
312.5 |
300.0 |
H14 |
C8 |
C7 |
H12 |
192.9 |
180.0 |
C7 |
C8 |
H14 |
H13 |
240.9 |
240.0 |
H14 |
C8 |
C9 |
C10 |
239.9 |
210.1 |
C9 |
C8 |
H14 |
H13 |
119.1 |
120.0 |
H15 |
C14 |
C13 |
C12 |
180.0 |
180.0 |
H15 |
C14 |
C13 |
H16 |
0.0 |
0.1 |
H15 |
C14 |
C9 |
C10 |
180.0 |
180.2 |
C14 |
C13 |
H16 |
C12 |
180.0 |
180.0 |
H16 |
C13 |
C14 |
H15 |
0.0 |
0.1 |
H16 |
C13 |
C12 |
C11 |
180.0 |
180.0 |
H16 |
C13 |
C12 |
H17 |
0.1 |
360.0 |
C13 |
C12 |
H17 |
C11 |
180.0 |
180.0 |
H17 |
C12 |
C13 |
H16 |
0.1 |
360.0 |
H17 |
C12 |
C11 |
H18 |
360.0 |
0.0 |
H18 |
C11 |
C12 |
H17 |
360.0 |
0.0 |
C9 |
C10 |
H19 |
C11 |
180.0 |
179.9 |
H19 |
C10 |
C11 |
H18 |
359.9 |
0.0 |