PDB Chemical Component 0B1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0B1
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C21 |
C6 |
1.540 |
1.530 |
C21 |
C7 |
1.526 |
1.530 |
O1 |
C1 |
1.258 |
1.220 |
C2 |
C1 |
1.400 |
1.406 |
C2 |
C3 |
1.409 |
1.365 |
C13 |
C12 |
1.400 |
1.383 |
C13 |
C8 |
1.406 |
1.383 |
C6 |
C7 |
1.545 |
1.530 |
C6 |
C3 |
1.491 |
1.507 |
C7 |
C8 |
1.501 |
1.507 |
C1 |
N2 |
1.419 |
1.350 |
C3 |
N1 |
1.372 |
1.331 |
C12 |
C11 |
1.394 |
1.380 |
C8 |
C9 |
1.401 |
1.380 |
N2 |
C5 |
1.470 |
1.466 |
N2 |
C4 |
1.427 |
1.360 |
N1 |
C4 |
1.377 |
1.318 |
C11 |
C10 |
1.400 |
1.393 |
C9 |
C10 |
1.396 |
1.393 |
C4 |
N3 |
1.373 |
1.369 |
C10 |
C14 |
1.487 |
1.485 |
C14 |
C15 |
1.390 |
1.392 |
C14 |
C20 |
1.399 |
1.393 |
C15 |
C16 |
1.392 |
1.386 |
C20 |
C19 |
1.396 |
1.380 |
C17 |
O2 |
1.434 |
1.429 |
C16 |
O2 |
1.383 |
1.359 |
C16 |
C18 |
1.394 |
1.388 |
C19 |
C18 |
1.397 |
1.382 |
C5 |
H1 |
1.100 |
1.090 |
C5 |
H2 |
1.100 |
1.090 |
C5 |
H3 |
1.100 |
1.090 |
N3 |
H5 |
1.000 |
0.971 |
N3 |
H6 |
1.000 |
0.970 |
C2 |
H8 |
1.080 |
1.079 |
C6 |
H10 |
1.100 |
1.089 |
C21 |
H11 |
1.100 |
1.091 |
C21 |
H12 |
1.100 |
1.090 |
C7 |
H13 |
1.100 |
1.090 |
C13 |
H14 |
1.080 |
1.080 |
C12 |
H15 |
1.080 |
1.080 |
C11 |
H16 |
1.080 |
1.080 |
C9 |
H17 |
1.080 |
1.080 |
C20 |
H18 |
1.080 |
1.080 |
C19 |
H19 |
1.080 |
1.080 |
C18 |
H20 |
1.080 |
1.080 |
C15 |
H21 |
1.080 |
1.080 |
C17 |
H22 |
1.100 |
1.090 |
C17 |
H23 |
1.100 |
1.090 |
C17 |
H24 |
1.100 |
1.090 |
Bond Angles for 0B1
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C21 |
C6 |
C7 |
59.3 |
60.0 |
C21 |
C6 |
H10 |
117.5 |
117.5 |
C6 |
C7 |
C21 |
60.2 |
60.0 |
C21 |
C7 |
C8 |
114.0 |
117.5 |
C7 |
C21 |
H11 |
119.9 |
117.5 |
C7 |
C21 |
H12 |
119.9 |
117.5 |
C21 |
C7 |
H13 |
116.4 |
117.5 |
O1 |
C1 |
N2 |
119.4 |
120.7 |
C13 |
C12 |
C11 |
119.9 |
120.1 |
C12 |
C13 |
H14 |
119.4 |
119.8 |
C13 |
C12 |
H15 |
120.1 |
119.9 |
C13 |
C8 |
C9 |
118.3 |
120.1 |
C6 |
C7 |
C8 |
120.8 |
117.5 |
C7 |
C6 |
H10 |
117.5 |
117.5 |
C6 |
C7 |
H13 |
116.0 |
117.5 |
C7 |
C8 |
C9 |
120.3 |
120.0 |
C8 |
C7 |
H13 |
116.9 |
115.6 |
C1 |
N2 |
C5 |
118.7 |
120.1 |
C1 |
N2 |
C4 |
119.1 |
119.8 |
C12 |
C11 |
C10 |
119.4 |
119.9 |
C11 |
C12 |
H15 |
120.1 |
119.9 |
C12 |
C11 |
H16 |
120.3 |
120.1 |
C8 |
C9 |
C10 |
120.5 |
119.9 |
C8 |
C9 |
H17 |
119.8 |
120.1 |
C5 |
N2 |
C4 |
122.3 |
120.1 |
N2 |
C5 |
H1 |
109.5 |
109.4 |
N2 |
C5 |
H2 |
109.4 |
109.4 |
N2 |
C5 |
H3 |
109.4 |
109.5 |
N2 |
C4 |
N3 |
119.5 |
119.4 |
C11 |
C10 |
C14 |
119.2 |
120.1 |
C10 |
C11 |
H16 |
120.3 |
120.1 |
C9 |
C10 |
C14 |
120.1 |
120.1 |
C4 |
N3 |
H5 |
120.0 |
120.0 |
C4 |
N3 |
H6 |
120.0 |
120.0 |
C10 |
C14 |
C15 |
118.7 |
120.1 |
C10 |
C14 |
C20 |
121.2 |
120.1 |
C20 |
C14 |
C15 |
120.1 |
119.8 |
C14 |
C15 |
C16 |
120.8 |
119.8 |
C14 |
C15 |
H21 |
119.6 |
120.1 |
C14 |
C20 |
C19 |
119.6 |
120.0 |
C14 |
C20 |
H18 |
120.2 |
120.0 |
C15 |
C16 |
O2 |
120.5 |
120.0 |
C20 |
C19 |
C18 |
119.7 |
120.2 |
C19 |
C20 |
H18 |
120.2 |
120.0 |
C20 |
C19 |
H19 |
120.2 |
119.9 |
C16 |
C18 |
H20 |
119.5 |
119.9 |
C18 |
C19 |
H19 |
120.2 |
119.9 |
C19 |
C18 |
H20 |
119.6 |
119.9 |
H1 |
C5 |
H2 |
109.5 |
109.5 |
H1 |
C5 |
H3 |
109.4 |
109.5 |
H2 |
C5 |
H3 |
109.5 |
109.5 |
H5 |
N3 |
H6 |
120.0 |
120.0 |
H11 |
C21 |
H12 |
109.5 |
115.5 |
H22 |
C17 |
H23 |
109.5 |
109.5 |
H22 |
C17 |
H24 |
109.5 |
109.5 |
H23 |
C17 |
H24 |
109.5 |
109.5 |
Torsion Angles for 0B1
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C7 |
C21 |
C6 |
-0.0 |
360.0 |
C21 |
C6 |
C7 |
C8 |
101.8 |
107.5 |
C7 |
C6 |
C21 |
H10 |
107.2 |
107.5 |
C21 |
C6 |
C7 |
H13 |
253.1 |
252.5 |
C7 |
C21 |
C6 |
C7 |
360.0 |
-0.0 |
C7 |
C21 |
C6 |
H10 |
252.8 |
252.5 |
C6 |
C7 |
C21 |
C8 |
113.0 |
107.5 |
C21 |
C7 |
C6 |
H10 |
107.3 |
107.5 |
C6 |
C7 |
C21 |
H13 |
253.7 |
252.6 |
C21 |
C7 |
C8 |
C9 |
137.0 |
188.6 |
C8 |
C7 |
C21 |
H13 |
140.7 |
145.0 |
H11 |
C21 |
C7 |
H12 |
140.8 |
144.9 |
O1 |
C1 |
N2 |
C5 |
359.3 |
0.1 |
O1 |
C1 |
N2 |
C4 |
180.1 |
180.0 |
C12 |
C13 |
C8 |
C9 |
357.9 |
0.2 |
C13 |
C12 |
C11 |
C10 |
359.7 |
359.9 |
C11 |
C12 |
C13 |
H15 |
180.0 |
180.1 |
C13 |
C12 |
C11 |
H16 |
179.7 |
180.0 |
C7 |
C8 |
C13 |
C9 |
183.6 |
179.7 |
C13 |
C8 |
C7 |
H13 |
93.8 |
154.6 |
C13 |
C8 |
C9 |
C10 |
2.3 |
359.4 |
C13 |
C8 |
C9 |
H17 |
182.3 |
179.7 |
C21 |
C6 |
C7 |
H10 |
252.7 |
252.5 |
C21 |
C7 |
C6 |
C8 |
258.2 |
252.5 |
C6 |
C7 |
C21 |
H11 |
250.4 |
252.5 |
C6 |
C7 |
C21 |
H12 |
109.6 |
107.5 |
C21 |
C7 |
C6 |
H13 |
106.9 |
107.5 |
C6 |
C7 |
C8 |
C9 |
68.6 |
119.9 |
C8 |
C7 |
C6 |
H13 |
208.7 |
215.0 |
C6 |
C7 |
C8 |
C21 |
291.6 |
291.4 |
C8 |
C7 |
C21 |
H11 |
137.4 |
145.0 |
C8 |
C7 |
C21 |
H12 |
356.6 |
0.0 |
C21 |
C7 |
C8 |
H13 |
219.5 |
214.3 |
C13 |
C8 |
C7 |
C9 |
176.3 |
180.3 |
C8 |
C7 |
C6 |
H10 |
209.1 |
215.0 |
C6 |
C7 |
C8 |
H13 |
151.1 |
145.7 |
C7 |
C8 |
C9 |
C10 |
178.7 |
179.7 |
C7 |
C8 |
C9 |
H17 |
358.7 |
0.0 |
C5 |
N2 |
C1 |
C4 |
179.2 |
180.0 |
C1 |
N2 |
C5 |
H1 |
180.0 |
0.0 |
C1 |
N2 |
C5 |
H2 |
300.0 |
120.0 |
C1 |
N2 |
C5 |
H3 |
60.0 |
240.0 |
C1 |
N2 |
C4 |
N3 |
179.8 |
180.1 |
C11 |
C12 |
C13 |
H14 |
181.1 |
180.1 |
C13 |
C12 |
C11 |
H15 |
180.0 |
179.9 |
C12 |
C11 |
C10 |
C14 |
179.7 |
180.0 |
C10 |
C11 |
C12 |
H16 |
180.0 |
180.0 |
C9 |
C8 |
C7 |
H13 |
277.5 |
334.3 |
C8 |
C9 |
C10 |
C14 |
179.2 |
180.3 |
C1 |
N2 |
C5 |
C4 |
180.8 |
180.0 |
C5 |
N2 |
C4 |
N3 |
0.6 |
0.0 |
H1 |
C5 |
N2 |
H2 |
240.0 |
240.1 |
H1 |
C5 |
N2 |
H3 |
120.0 |
120.0 |
H2 |
C5 |
N2 |
H3 |
240.0 |
240.0 |
C1 |
N2 |
C4 |
C5 |
179.2 |
180.0 |
C4 |
N2 |
C5 |
H1 |
359.2 |
180.0 |
C4 |
N2 |
C5 |
H2 |
119.2 |
300.0 |
C4 |
N2 |
C5 |
H3 |
239.2 |
60.0 |
N2 |
C4 |
N3 |
H5 |
180.1 |
360.0 |
N2 |
C4 |
N3 |
H6 |
0.1 |
180.0 |
N1 |
C4 |
N3 |
H5 |
0.0 |
180.0 |
N1 |
C4 |
N3 |
H6 |
180.0 |
0.0 |
C10 |
C11 |
C12 |
H15 |
179.7 |
180.0 |
C12 |
C11 |
C10 |
H16 |
180.0 |
180.0 |
C8 |
C9 |
C10 |
C11 |
358.4 |
0.6 |
C9 |
C10 |
C11 |
C14 |
180.8 |
179.7 |
C11 |
C10 |
C14 |
C15 |
28.0 |
359.9 |
C11 |
C10 |
C14 |
C20 |
209.5 |
180.3 |
C8 |
C9 |
C10 |
H17 |
180.0 |
180.3 |
C11 |
C10 |
C9 |
C14 |
179.2 |
180.3 |
C9 |
C10 |
C11 |
H16 |
180.5 |
179.7 |
C9 |
C10 |
C14 |
C15 |
207.2 |
180.2 |
C9 |
C10 |
C14 |
C20 |
28.7 |
0.6 |
H5 |
N3 |
C4 |
H6 |
180.0 |
180.0 |
C14 |
C10 |
C11 |
H16 |
359.7 |
0.0 |
C20 |
C14 |
C10 |
C15 |
181.5 |
180.4 |
C10 |
C14 |
C15 |
C16 |
180.8 |
179.7 |
C10 |
C14 |
C15 |
H21 |
0.8 |
0.1 |
C10 |
C14 |
C20 |
C19 |
179.5 |
180.0 |
C10 |
C14 |
C20 |
H18 |
359.5 |
359.9 |
C10 |
C14 |
C15 |
C20 |
181.5 |
180.4 |
C15 |
C14 |
C20 |
C19 |
1.0 |
0.4 |
C15 |
C14 |
C20 |
H18 |
181.0 |
180.3 |
C14 |
C15 |
C16 |
O2 |
180.3 |
180.3 |
C10 |
C14 |
C20 |
C15 |
178.5 |
179.6 |
C20 |
C14 |
C15 |
C16 |
359.4 |
359.3 |
C20 |
C14 |
C15 |
H21 |
179.4 |
179.7 |
C14 |
C20 |
C19 |
C18 |
358.7 |
359.9 |
C19 |
C20 |
C14 |
H18 |
180.0 |
180.1 |
C14 |
C20 |
C19 |
H19 |
178.7 |
180.0 |
C14 |
C15 |
C16 |
H21 |
180.0 |
180.4 |
C15 |
C16 |
C18 |
H20 |
179.0 |
179.7 |
C19 |
C20 |
C14 |
C15 |
1.0 |
0.4 |
C14 |
C20 |
C19 |
H18 |
180.0 |
179.9 |
C18 |
C19 |
C20 |
H19 |
180.0 |
180.0 |
C20 |
C19 |
C18 |
H20 |
181.3 |
180.0 |
O2 |
C16 |
C18 |
H20 |
359.3 |
0.0 |
C14 |
C15 |
C16 |
C18 |
0.6 |
0.7 |
C16 |
C18 |
C19 |
H19 |
181.3 |
180.0 |
C19 |
C18 |
C16 |
H20 |
180.0 |
179.9 |
C18 |
C19 |
C20 |
H18 |
178.6 |
180.0 |
C20 |
C19 |
C18 |
H19 |
180.0 |
180.0 |
C16 |
C18 |
C19 |
H20 |
180.0 |
180.1 |
H1 |
C5 |
N2 |
C4 |
359.2 |
180.0 |
N2 |
C5 |
H1 |
H2 |
120.0 |
119.9 |
N2 |
C5 |
H1 |
H3 |
240.0 |
240.0 |
H2 |
C5 |
H1 |
H3 |
120.0 |
120.1 |
H2 |
C5 |
N2 |
C4 |
119.2 |
300.0 |
N2 |
C5 |
H2 |
H1 |
239.9 |
240.1 |
N2 |
C5 |
H2 |
H3 |
120.0 |
120.0 |
H1 |
C5 |
H2 |
H3 |
240.0 |
239.9 |
H3 |
C5 |
N2 |
C4 |
239.2 |
60.0 |
N2 |
C5 |
H3 |
H1 |
120.0 |
120.0 |
N2 |
C5 |
H3 |
H2 |
240.0 |
240.0 |
H1 |
C5 |
H3 |
H2 |
120.0 |
120.1 |
C4 |
N3 |
H5 |
H6 |
180.0 |
180.0 |
C4 |
N3 |
H6 |
H5 |
180.0 |
180.0 |
C21 |
C6 |
H10 |
C7 |
67.8 |
68.6 |
H10 |
C6 |
C7 |
C21 |
107.3 |
107.5 |
H10 |
C6 |
C7 |
C8 |
209.1 |
215.0 |
H10 |
C6 |
C7 |
H13 |
0.5 |
360.0 |
H11 |
C21 |
C6 |
C7 |
109.6 |
107.4 |
H11 |
C21 |
C6 |
H10 |
2.4 |
360.0 |
H11 |
C21 |
C7 |
C8 |
137.4 |
145.0 |
C7 |
C21 |
H11 |
H12 |
215.5 |
214.4 |
H11 |
C21 |
C7 |
H13 |
356.7 |
359.9 |
H12 |
C21 |
C6 |
C7 |
250.4 |
252.5 |
H12 |
C21 |
C6 |
H10 |
143.2 |
145.1 |
H12 |
C21 |
C7 |
C8 |
356.6 |
0.0 |
C7 |
C21 |
H12 |
H11 |
144.5 |
145.6 |
H12 |
C21 |
C7 |
H13 |
215.9 |
215.0 |
C6 |
C7 |
H13 |
C21 |
67.9 |
68.6 |
C21 |
C7 |
H13 |
C8 |
139.6 |
145.7 |
H13 |
C7 |
C21 |
H11 |
356.7 |
359.9 |
H13 |
C7 |
C21 |
H12 |
215.9 |
215.0 |
C6 |
C7 |
H13 |
C8 |
207.5 |
214.3 |
H13 |
C7 |
C6 |
H10 |
0.5 |
360.0 |
H13 |
C7 |
C8 |
C9 |
277.5 |
334.3 |
H14 |
C13 |
C12 |
C11 |
181.1 |
180.1 |
H14 |
C13 |
C12 |
H15 |
1.1 |
360.0 |
H14 |
C13 |
C8 |
C9 |
177.9 |
180.3 |
C13 |
C12 |
H15 |
C11 |
180.0 |
180.1 |
H15 |
C12 |
C13 |
H14 |
1.1 |
360.0 |
H15 |
C12 |
C11 |
C10 |
179.7 |
180.0 |
H15 |
C12 |
C11 |
H16 |
359.7 |
0.1 |
C12 |
C11 |
H16 |
C10 |
180.0 |
180.0 |
H16 |
C11 |
C12 |
H15 |
359.7 |
0.1 |
H16 |
C11 |
C10 |
C14 |
359.7 |
0.0 |
C8 |
C9 |
H17 |
C10 |
180.0 |
179.7 |
H17 |
C9 |
C10 |
C14 |
359.2 |
360.0 |
H18 |
C20 |
C14 |
C15 |
181.0 |
180.3 |
C14 |
C20 |
H18 |
C19 |
180.0 |
180.1 |
H18 |
C20 |
C19 |
C18 |
178.6 |
180.0 |
H18 |
C20 |
C19 |
H19 |
358.7 |
0.1 |
C20 |
C19 |
H19 |
C18 |
180.0 |
180.0 |
H19 |
C19 |
C20 |
H18 |
358.7 |
0.1 |
H19 |
C19 |
C18 |
H20 |
1.3 |
360.0 |
H20 |
C18 |
C19 |
H19 |
1.3 |
360.0 |
C14 |
C15 |
H21 |
C16 |
180.0 |
179.6 |
H21 |
C15 |
C16 |
O2 |
0.3 |
359.9 |
H23 |
C17 |
H22 |
H24 |
120.0 |
120.0 |
H22 |
C17 |
H23 |
H24 |
240.0 |
240.0 |
H22 |
C17 |
H24 |
H23 |
120.0 |
120.0 |