PDB Chemical Component 0AK
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0AK
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.447 |
1.469 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.010 |
| CA |
C |
1.504 |
1.507 |
| CA |
CB |
1.554 |
1.530 |
| CA |
HA |
1.101 |
1.090 |
| C |
O |
1.205 |
1.208 |
| C |
OXT |
1.325 |
1.343 |
| CB |
CG |
1.508 |
1.506 |
| CB |
HBC1 |
1.100 |
1.089 |
| CB |
HBC2 |
1.100 |
1.090 |
| CG |
OD1 |
1.288 |
1.208 |
| CG |
OD2 |
1.217 |
1.343 |
| OD2 |
C1 |
1.229 |
1.452 |
| C1 |
C2 |
1.506 |
1.530 |
| C1 |
H1C1 |
1.100 |
1.090 |
| C1 |
H1C2 |
1.100 |
1.089 |
| C2 |
CL |
1.670 |
1.803 |
| C2 |
H2C1 |
1.100 |
1.090 |
| C2 |
H2C2 |
1.100 |
1.090 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for 0AK
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.0 |
| N |
CA |
C |
109.4 |
109.5 |
| N |
CA |
CB |
109.0 |
109.5 |
| N |
CA |
HA |
110.7 |
109.4 |
| H |
N |
H2 |
109.5 |
110.9 |
| C |
CA |
CB |
112.0 |
109.5 |
| C |
CA |
HA |
107.6 |
109.5 |
| CA |
C |
O |
120.3 |
120.0 |
| CA |
C |
OXT |
117.7 |
120.0 |
| CB |
CA |
HA |
108.1 |
109.5 |
| CA |
CB |
CG |
120.2 |
109.5 |
| CA |
CB |
HBC1 |
106.0 |
109.4 |
| CA |
CB |
HBC2 |
103.5 |
109.4 |
| O |
C |
OXT |
121.9 |
120.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
| CG |
CB |
HBC1 |
106.1 |
109.5 |
| CG |
CB |
HBC2 |
103.5 |
109.5 |
| CB |
CG |
OD1 |
112.5 |
120.1 |
| CB |
CG |
OD2 |
123.8 |
120.0 |
| HBC1 |
CB |
HBC2 |
118.3 |
109.5 |
| OD1 |
CG |
OD2 |
123.5 |
119.9 |
| CG |
OD2 |
C1 |
127.7 |
117.0 |
| OD2 |
C1 |
C2 |
125.6 |
109.4 |
| OD2 |
C1 |
H1C1 |
104.4 |
109.5 |
| OD2 |
C1 |
H1C2 |
100.6 |
109.5 |
| C2 |
C1 |
H1C1 |
104.4 |
109.5 |
| C2 |
C1 |
H1C2 |
100.6 |
109.5 |
| C1 |
C2 |
CL |
112.3 |
109.5 |
| C1 |
C2 |
H2C1 |
108.5 |
109.5 |
| C1 |
C2 |
H2C2 |
107.9 |
109.5 |
| H1C1 |
C1 |
H1C2 |
123.2 |
109.5 |
| CL |
C2 |
H2C1 |
108.6 |
109.4 |
| CL |
C2 |
H2C2 |
107.9 |
109.5 |
| H2C1 |
C2 |
H2C2 |
111.7 |
109.4 |
Torsion Angles for 0AK
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
240.0 |
236.1 |
| C |
CA |
N |
CB |
122.8 |
120.0 |
| C |
CA |
N |
HA |
241.6 |
240.0 |
| N |
CA |
C |
O |
44.5 |
340.0 |
| N |
CA |
C |
OXT |
227.0 |
160.0 |
| CB |
CA |
N |
HA |
118.8 |
120.0 |
| N |
CA |
CB |
CG |
198.3 |
295.0 |
| N |
CA |
CB |
HBC1 |
318.4 |
55.0 |
| N |
CA |
CB |
HBC2 |
83.6 |
175.1 |
| CA |
N |
H |
H2 |
120.0 |
123.9 |
| H |
N |
CA |
C |
132.6 |
296.1 |
| H |
N |
CA |
CB |
9.8 |
176.1 |
| H |
N |
CA |
HA |
251.1 |
56.1 |
| CA |
N |
H2 |
H |
240.0 |
236.1 |
| H2 |
N |
CA |
C |
252.7 |
60.0 |
| H2 |
N |
CA |
CB |
129.8 |
300.0 |
| H2 |
N |
CA |
HA |
11.1 |
180.0 |
| C |
CA |
N |
H |
132.6 |
296.1 |
| C |
CA |
N |
H2 |
252.7 |
60.0 |
| N |
CA |
C |
CB |
239.0 |
240.0 |
| N |
CA |
C |
HA |
120.4 |
120.0 |
| CB |
CA |
C |
HA |
241.3 |
240.0 |
| C |
CA |
CB |
CG |
77.1 |
175.0 |
| C |
CA |
CB |
HBC1 |
197.1 |
295.0 |
| C |
CA |
CB |
HBC2 |
322.3 |
55.0 |
| O |
C |
CA |
OXT |
177.5 |
180.0 |
| CA |
C |
OXT |
HXT |
177.4 |
180.0 |
| CB |
CA |
N |
H |
9.8 |
176.1 |
| CB |
CA |
N |
H2 |
129.8 |
300.0 |
| N |
CA |
CB |
C |
121.2 |
120.0 |
| N |
CA |
CB |
HA |
239.6 |
240.1 |
| C |
CA |
CB |
HA |
118.4 |
120.0 |
| CB |
CA |
C |
O |
165.5 |
100.0 |
| CB |
CA |
C |
OXT |
348.0 |
280.0 |
| CG |
CB |
CA |
HBC1 |
240.0 |
240.0 |
| CG |
CB |
CA |
HBC2 |
114.8 |
120.0 |
| CA |
CB |
CG |
OD1 |
269.3 |
0.1 |
| CA |
CB |
CG |
OD2 |
94.9 |
180.0 |
| HBC1 |
CB |
CA |
HBC2 |
234.8 |
240.0 |
| HA |
CA |
N |
H |
251.1 |
56.1 |
| HA |
CA |
N |
H2 |
11.1 |
180.0 |
| N |
CA |
HA |
C |
240.5 |
240.0 |
| N |
CA |
HA |
CB |
119.3 |
120.0 |
| C |
CA |
HA |
CB |
238.8 |
240.0 |
| HA |
CA |
C |
O |
284.1 |
220.0 |
| HA |
CA |
C |
OXT |
106.7 |
40.0 |
| HA |
CA |
CB |
CG |
318.7 |
55.0 |
| HA |
CA |
CB |
HBC1 |
78.7 |
175.0 |
| HA |
CA |
CB |
HBC2 |
204.0 |
295.0 |
| O |
C |
CA |
CB |
165.5 |
100.0 |
| O |
C |
CA |
HA |
284.1 |
220.0 |
| CA |
C |
O |
OXT |
182.6 |
180.0 |
| O |
C |
OXT |
HXT |
360.0 |
360.0 |
| OXT |
C |
CA |
CB |
348.0 |
280.0 |
| OXT |
C |
CA |
HA |
106.7 |
40.0 |
| CA |
C |
OXT |
O |
177.4 |
180.0 |
| CG |
CB |
CA |
HA |
318.7 |
55.0 |
| CA |
CB |
CG |
HBC1 |
120.0 |
120.0 |
| CA |
CB |
CG |
HBC2 |
245.2 |
240.1 |
| HBC1 |
CB |
CG |
HBC2 |
125.2 |
120.1 |
| OD1 |
CG |
CB |
OD2 |
174.4 |
180.0 |
| CB |
CG |
OD2 |
C1 |
209.6 |
180.0 |
| HBC1 |
CB |
CA |
HA |
78.7 |
175.0 |
| CA |
CB |
HBC1 |
CG |
231.1 |
240.0 |
| CA |
CB |
HBC1 |
HBC2 |
115.5 |
120.0 |
| CG |
CB |
HBC1 |
HBC2 |
244.4 |
240.0 |
| HBC1 |
CB |
CG |
OD1 |
149.3 |
240.1 |
| HBC1 |
CB |
CG |
OD2 |
334.9 |
60.0 |
| HBC2 |
CB |
CA |
HA |
204.0 |
295.0 |
| CA |
CB |
HBC2 |
CG |
126.2 |
120.0 |
| CA |
CB |
HBC2 |
HBC1 |
243.1 |
240.0 |
| CG |
CB |
HBC2 |
HBC1 |
116.9 |
120.1 |
| HBC2 |
CB |
CG |
OD1 |
24.1 |
120.0 |
| HBC2 |
CB |
CG |
OD2 |
209.7 |
299.9 |
| OD1 |
CG |
CB |
HBC1 |
149.3 |
240.1 |
| OD1 |
CG |
CB |
HBC2 |
24.1 |
120.0 |
| CB |
CG |
OD1 |
OD2 |
185.6 |
180.0 |
| OD1 |
CG |
OD2 |
C1 |
35.8 |
360.0 |
| OD2 |
CG |
CB |
HBC1 |
334.9 |
60.0 |
| OD2 |
CG |
CB |
HBC2 |
209.7 |
299.9 |
| CB |
CG |
OD2 |
OD1 |
173.8 |
180.0 |
| CG |
OD2 |
C1 |
C2 |
21.1 |
180.0 |
| CG |
OD2 |
C1 |
H1C1 |
141.1 |
300.0 |
| CG |
OD2 |
C1 |
H1C2 |
269.7 |
60.0 |
| C2 |
C1 |
OD2 |
H1C1 |
240.0 |
240.0 |
| C2 |
C1 |
OD2 |
H1C2 |
111.4 |
120.0 |
| OD2 |
C1 |
C2 |
CL |
155.7 |
65.0 |
| OD2 |
C1 |
C2 |
H2C1 |
275.7 |
185.0 |
| OD2 |
C1 |
C2 |
H2C2 |
36.9 |
304.9 |
| H1C1 |
C1 |
OD2 |
H1C2 |
231.4 |
240.0 |
| OD2 |
C1 |
C2 |
H1C1 |
120.0 |
120.0 |
| OD2 |
C1 |
C2 |
H1C2 |
248.6 |
240.0 |
| H1C1 |
C1 |
C2 |
H1C2 |
128.6 |
120.0 |
| CL |
C2 |
C1 |
H2C1 |
240.0 |
240.0 |
| CL |
C2 |
C1 |
H2C2 |
118.8 |
120.1 |
| H2C1 |
C2 |
C1 |
H2C2 |
238.8 |
240.1 |
| OD2 |
C1 |
H1C1 |
C2 |
226.7 |
240.0 |
| OD2 |
C1 |
H1C1 |
H1C2 |
113.3 |
120.1 |
| C2 |
C1 |
H1C1 |
H1C2 |
246.6 |
240.0 |
| H1C1 |
C1 |
C2 |
CL |
35.7 |
305.0 |
| H1C1 |
C1 |
C2 |
H2C1 |
155.7 |
65.0 |
| H1C1 |
C1 |
C2 |
H2C2 |
276.9 |
184.9 |
| OD2 |
C1 |
H1C2 |
C2 |
129.6 |
120.0 |
| OD2 |
C1 |
H1C2 |
H1C1 |
244.8 |
240.0 |
| C2 |
C1 |
H1C2 |
H1C1 |
115.2 |
120.0 |
| H1C2 |
C1 |
C2 |
CL |
267.1 |
185.0 |
| H1C2 |
C1 |
C2 |
H2C1 |
27.1 |
305.0 |
| H1C2 |
C1 |
C2 |
H2C2 |
148.3 |
65.0 |
| CL |
C2 |
C1 |
H1C1 |
35.7 |
305.0 |
| CL |
C2 |
C1 |
H1C2 |
267.1 |
185.0 |
| C1 |
C2 |
CL |
H2C1 |
120.0 |
120.0 |
| C1 |
C2 |
CL |
H2C2 |
241.2 |
239.9 |
| H2C1 |
C2 |
CL |
H2C2 |
121.2 |
119.9 |
| H2C1 |
C2 |
C1 |
H1C1 |
155.7 |
65.0 |
| H2C1 |
C2 |
C1 |
H1C2 |
27.1 |
305.0 |
| C1 |
C2 |
H2C1 |
CL |
237.7 |
240.0 |
| C1 |
C2 |
H2C1 |
H2C2 |
118.8 |
120.0 |
| CL |
C2 |
H2C1 |
H2C2 |
241.1 |
240.0 |
| H2C2 |
C2 |
C1 |
H1C1 |
276.9 |
184.9 |
| H2C2 |
C2 |
C1 |
H1C2 |
148.3 |
65.0 |
| C1 |
C2 |
H2C2 |
CL |
121.6 |
120.1 |
| C1 |
C2 |
H2C2 |
H2C1 |
240.8 |
240.0 |
| CL |
C2 |
H2C2 |
H2C1 |
119.2 |
120.0 |