PDB Chemical Component 0AD

Ideal Model

Chemical Description

Name 2'-deoxy-N-propylguanosine 5'-(dihydrogen phosphate)
Formula C13 H20 N5 O7 P
Formal charge 0
Molecular weight 389.301 g/mol
Component type DNA LINKING
Nonstandard Parent Id DG

Chemical features

Atom count 46
Chiral atom count 3
Chiral atoms C4' C3' C1'
Bond count 48
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2'-deoxy-N-propylguanosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-3-hydroxy-5-(6-oxo-2-propylamino-1H-purin-9-yl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) CCCNC1=Nc2n(cnc2C(=O)N1)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3
SMILES (CACTVS) CCCNC1=Nc2n(cnc2C(=O)N1)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3
Stereo SMILES (OpenEye) CCCNC1=Nc2c(ncn2[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)C(=O)N1
InChI descriptor InChI=1S/C13H20N5O7P/c1-2-3-14-13-16-11-10(12(20)17-13)15-6-18(11)9-4-7(19)8(25-9)5-24-26(21,22)23/h6-9,19H,2-5H2,1H3,(H2,21,22,23)(H2,14,16,17,20)/t7-,8+,9+/m0/s1
InChIKey descriptor OWYUJGCLBCUIHH-DJLDLDEBSA-N

Status Information

Last modified 2011-06-04
Created 2007-11-10
Release status REL
Model PDB code 1HZ2
Processing site RCSB