PDB Chemical Component 0A1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0A1
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.452 |
1.469 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| CA |
C |
1.538 |
1.506 |
| CA |
CB |
1.539 |
1.530 |
| CA |
HA |
1.100 |
1.090 |
| CB |
CG |
1.519 |
1.507 |
| CB |
HBC1 |
1.100 |
1.089 |
| CB |
HBC2 |
1.100 |
1.090 |
| CG |
CD1 |
1.393 |
1.382 |
| CG |
CD2 |
1.392 |
1.382 |
| CD1 |
CE1 |
1.377 |
1.382 |
| CD1 |
HD1 |
1.080 |
1.079 |
| CE1 |
CZ |
1.382 |
1.387 |
| CE1 |
HE1 |
1.080 |
1.081 |
| CZ |
OH |
1.380 |
1.359 |
| OH |
CM |
1.430 |
1.429 |
| CM |
HMC1 |
1.100 |
1.090 |
| CM |
HMC2 |
1.100 |
1.090 |
| CM |
HMC3 |
1.100 |
1.090 |
| CE2 |
CZ |
1.388 |
1.387 |
| CE2 |
HE2 |
1.080 |
1.081 |
| CD2 |
CE2 |
1.383 |
1.382 |
| CD2 |
HD2 |
1.080 |
1.080 |
| C |
OXT |
1.242 |
1.342 |
| C |
O |
1.245 |
1.209 |
| HXT |
OXT |
0.950 |
0.968 |
Bond Angles for 0A1
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.4 |
111.0 |
| N |
CA |
C |
109.8 |
109.5 |
| N |
CA |
CB |
110.2 |
109.5 |
| N |
CA |
HA |
109.8 |
109.5 |
| H |
N |
H2 |
109.4 |
111.0 |
| CB |
CA |
C |
112.6 |
109.5 |
| C |
CA |
HA |
107.3 |
109.5 |
| CA |
C |
OXT |
120.3 |
120.0 |
| CA |
C |
O |
117.5 |
120.0 |
| CB |
CA |
HA |
106.9 |
109.4 |
| CA |
CB |
CG |
116.4 |
109.5 |
| CA |
CB |
HBC1 |
107.2 |
109.5 |
| CA |
CB |
HBC2 |
105.6 |
109.5 |
| CG |
CB |
HBC1 |
107.2 |
109.5 |
| CG |
CB |
HBC2 |
105.6 |
109.4 |
| CB |
CG |
CD1 |
121.4 |
119.9 |
| CB |
CG |
CD2 |
120.5 |
119.9 |
| HBC1 |
CB |
HBC2 |
115.1 |
109.5 |
| CD1 |
CG |
CD2 |
118.1 |
120.1 |
| CG |
CD1 |
CE1 |
121.3 |
120.0 |
| CG |
CD1 |
HD1 |
119.4 |
120.0 |
| CG |
CD2 |
CE2 |
121.2 |
120.0 |
| CG |
CD2 |
HD2 |
119.4 |
120.0 |
| CE1 |
CD1 |
HD1 |
119.3 |
120.0 |
| CD1 |
CE1 |
CZ |
119.7 |
120.0 |
| CD1 |
CE1 |
HE1 |
120.1 |
120.0 |
| CZ |
CE1 |
HE1 |
120.2 |
120.0 |
| CE1 |
CZ |
OH |
118.8 |
120.1 |
| CZ |
OH |
CM |
135.0 |
117.0 |
| OH |
CM |
HMC1 |
109.5 |
109.5 |
| OH |
CM |
HMC2 |
109.4 |
109.5 |
| OH |
CM |
HMC3 |
109.5 |
109.4 |
| HMC1 |
CM |
HMC2 |
109.5 |
109.4 |
| HMC1 |
CM |
HMC3 |
109.5 |
109.5 |
| HMC2 |
CM |
HMC3 |
109.5 |
109.5 |
| CD2 |
CE2 |
HE2 |
120.3 |
120.0 |
| O |
C |
OXT |
122.0 |
120.0 |
Torsion Angles for 0A1
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
240.1 |
236.1 |
| CB |
CA |
N |
C |
235.3 |
240.0 |
| C |
CA |
N |
HA |
242.2 |
240.0 |
| N |
CA |
C |
OXT |
158.4 |
160.0 |
| N |
CA |
C |
O |
343.0 |
340.0 |
| CB |
CA |
N |
HA |
117.5 |
119.9 |
| N |
CA |
CB |
CG |
52.1 |
295.0 |
| N |
CA |
CB |
HBC1 |
172.1 |
55.0 |
| N |
CA |
CB |
HBC2 |
295.3 |
175.1 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| H |
N |
CA |
C |
235.0 |
60.0 |
| H |
N |
CA |
CB |
110.3 |
300.0 |
| H |
N |
CA |
HA |
352.8 |
180.0 |
| CA |
N |
H2 |
H |
240.0 |
236.1 |
| H2 |
N |
CA |
C |
354.9 |
183.9 |
| H2 |
N |
CA |
CB |
230.2 |
63.9 |
| H2 |
N |
CA |
HA |
112.7 |
304.0 |
| C |
CA |
N |
H |
235.0 |
60.0 |
| C |
CA |
N |
H2 |
354.9 |
183.9 |
| N |
CA |
C |
CB |
236.7 |
240.0 |
| N |
CA |
C |
HA |
119.3 |
120.0 |
| CB |
CA |
C |
HA |
242.6 |
240.0 |
| C |
CA |
CB |
CG |
289.1 |
175.0 |
| C |
CA |
CB |
HBC1 |
49.0 |
295.0 |
| C |
CA |
CB |
HBC2 |
172.3 |
55.0 |
| O |
C |
CA |
OXT |
184.6 |
180.0 |
| CB |
CA |
N |
H |
110.3 |
300.0 |
| CB |
CA |
N |
H2 |
230.2 |
63.9 |
| N |
CA |
CB |
C |
123.1 |
120.1 |
| N |
CA |
CB |
HA |
240.7 |
240.0 |
| C |
CA |
CB |
HA |
117.6 |
120.0 |
| CB |
CA |
C |
OXT |
281.7 |
280.0 |
| CB |
CA |
C |
O |
106.3 |
100.0 |
| CG |
CB |
CA |
HBC1 |
240.0 |
240.0 |
| CG |
CB |
CA |
HBC2 |
116.8 |
120.0 |
| CA |
CB |
CG |
CD1 |
357.3 |
90.0 |
| CA |
CB |
CG |
CD2 |
175.8 |
269.8 |
| HBC1 |
CB |
CA |
HBC2 |
236.8 |
240.0 |
| HA |
CA |
N |
H |
352.8 |
180.0 |
| HA |
CA |
N |
H2 |
112.7 |
304.0 |
| N |
CA |
HA |
C |
240.6 |
239.9 |
| N |
CA |
HA |
CB |
119.6 |
120.0 |
| CB |
CA |
HA |
C |
121.1 |
120.0 |
| HA |
CA |
C |
OXT |
39.1 |
40.0 |
| HA |
CA |
C |
O |
223.7 |
220.0 |
| HA |
CA |
CB |
CG |
171.4 |
55.0 |
| HA |
CA |
CB |
HBC1 |
291.4 |
175.0 |
| HA |
CA |
CB |
HBC2 |
54.6 |
295.0 |
| CG |
CB |
CA |
C |
289.1 |
175.0 |
| CG |
CB |
CA |
HA |
171.4 |
55.0 |
| CA |
CB |
CG |
HBC1 |
120.0 |
120.0 |
| CA |
CB |
CG |
HBC2 |
243.2 |
240.0 |
| HBC1 |
CB |
CG |
HBC2 |
123.2 |
120.0 |
| CD1 |
CG |
CB |
CD2 |
181.5 |
180.2 |
| CB |
CG |
CD1 |
CE1 |
178.3 |
180.1 |
| CB |
CG |
CD1 |
HD1 |
358.3 |
0.0 |
| CB |
CG |
CD2 |
CE2 |
181.8 |
179.7 |
| CB |
CG |
CD2 |
HD2 |
1.8 |
359.9 |
| HBC1 |
CB |
CA |
C |
49.0 |
295.0 |
| HBC1 |
CB |
CA |
HA |
291.4 |
175.0 |
| CA |
CB |
HBC1 |
CG |
234.3 |
240.0 |
| CA |
CB |
HBC1 |
HBC2 |
117.2 |
120.0 |
| CG |
CB |
HBC1 |
HBC2 |
242.9 |
240.0 |
| HBC1 |
CB |
CG |
CD1 |
237.3 |
330.0 |
| HBC1 |
CB |
CG |
CD2 |
55.8 |
149.8 |
| HBC2 |
CB |
CA |
C |
172.3 |
55.0 |
| HBC2 |
CB |
CA |
HA |
54.6 |
295.0 |
| CA |
CB |
HBC2 |
CG |
123.9 |
120.0 |
| CA |
CB |
HBC2 |
HBC1 |
241.9 |
240.0 |
| CG |
CB |
HBC2 |
HBC1 |
118.0 |
120.0 |
| HBC2 |
CB |
CG |
CD1 |
114.1 |
210.0 |
| HBC2 |
CB |
CG |
CD2 |
292.6 |
29.8 |
| CD1 |
CG |
CB |
HBC1 |
237.3 |
330.0 |
| CD1 |
CG |
CB |
HBC2 |
114.1 |
210.0 |
| CB |
CG |
CD1 |
CD2 |
178.6 |
179.8 |
| CD1 |
CG |
CD2 |
CE2 |
0.4 |
359.5 |
| CD1 |
CG |
CD2 |
HD2 |
180.4 |
179.7 |
| CE1 |
CD1 |
CG |
HD1 |
180.0 |
180.1 |
| CG |
CD1 |
CE1 |
CZ |
0.1 |
359.9 |
| CG |
CD1 |
CE1 |
HE1 |
180.1 |
180.0 |
| CD2 |
CG |
CB |
HBC1 |
55.8 |
149.8 |
| CD2 |
CG |
CB |
HBC2 |
292.6 |
29.8 |
| CB |
CG |
CD2 |
CD1 |
181.4 |
180.2 |
| CD2 |
CG |
CD1 |
CE1 |
359.7 |
0.3 |
| CD2 |
CG |
CD1 |
HD1 |
179.7 |
180.2 |
| CG |
CD2 |
CE2 |
HE2 |
179.6 |
180.2 |
| CE1 |
CD1 |
CG |
CD2 |
359.7 |
0.3 |
| CG |
CD1 |
CE1 |
HD1 |
180.0 |
179.9 |
| CZ |
CE1 |
CD1 |
HE1 |
180.0 |
179.9 |
| CD1 |
CE1 |
CZ |
OH |
179.9 |
180.0 |
| HD1 |
CD1 |
CG |
CD2 |
179.7 |
180.2 |
| CG |
CD1 |
HD1 |
CE1 |
180.0 |
180.1 |
| HD1 |
CD1 |
CE1 |
CZ |
180.1 |
180.0 |
| HD1 |
CD1 |
CE1 |
HE1 |
0.1 |
0.1 |
| CZ |
CE1 |
CD1 |
HD1 |
180.1 |
180.0 |
| CD1 |
CE1 |
CZ |
HE1 |
180.0 |
180.1 |
| CE1 |
CZ |
OH |
CM |
65.7 |
180.0 |
| HE1 |
CE1 |
CD1 |
HD1 |
0.1 |
0.1 |
| CD1 |
CE1 |
HE1 |
CZ |
180.0 |
179.9 |
| HE1 |
CE1 |
CZ |
OH |
359.9 |
360.0 |
| OH |
CZ |
CE1 |
HE1 |
359.9 |
360.0 |
| CZ |
OH |
CM |
HMC1 |
327.4 |
180.0 |
| CZ |
OH |
CM |
HMC2 |
87.4 |
300.0 |
| CZ |
OH |
CM |
HMC3 |
207.4 |
60.0 |
| HMC1 |
CM |
OH |
HMC2 |
240.0 |
240.1 |
| HMC1 |
CM |
OH |
HMC3 |
120.0 |
120.0 |
| HMC2 |
CM |
OH |
HMC3 |
240.0 |
239.9 |
| OH |
CM |
HMC1 |
HMC2 |
120.0 |
120.0 |
| OH |
CM |
HMC1 |
HMC3 |
240.0 |
240.0 |
| HMC2 |
CM |
HMC1 |
HMC3 |
120.0 |
120.1 |
| OH |
CM |
HMC2 |
HMC1 |
240.0 |
240.0 |
| OH |
CM |
HMC2 |
HMC3 |
120.0 |
120.0 |
| HMC1 |
CM |
HMC2 |
HMC3 |
240.0 |
240.0 |
| OH |
CM |
HMC3 |
HMC1 |
120.0 |
120.0 |
| OH |
CM |
HMC3 |
HMC2 |
240.0 |
240.0 |
| HMC1 |
CM |
HMC3 |
HMC2 |
120.0 |
120.0 |
| CG |
CD2 |
CE2 |
CZ |
359.6 |
0.5 |
| CE2 |
CZ |
CE1 |
HE1 |
180.0 |
180.0 |
| CG |
CD2 |
CE2 |
HD2 |
180.0 |
180.2 |
| CG |
CD2 |
HD2 |
CE2 |
180.0 |
179.8 |
| HD2 |
CD2 |
CE2 |
HE2 |
359.6 |
0.0 |
| OXT |
C |
CA |
HA |
39.1 |
40.0 |
| CA |
C |
OXT |
O |
184.8 |
180.0 |
| O |
C |
CA |
HA |
223.7 |
220.0 |
| CA |
C |
O |
OXT |
175.3 |
180.0 |