PDB Chemical Component 09B

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 09B

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N19 C22 1.482 1.486
N19 C20 1.487 1.481
C12 C13 1.380 1.384
C12 C11 1.379 1.377
C13 C14 1.387 1.383
C22 C21 1.517 1.552
C22 C24 1.510 1.506
C20 C16 1.508 1.531
C21 C16 1.502 1.536
C11 C16 1.467 1.502
C11 C10 1.360 1.392
C24 O25 1.217 1.208
C24 O26 1.335 1.343
C16 C18 1.510 1.504
C14 C15 1.379 1.379
O26 C9 1.425 1.452
C5 C2 1.388 1.379
C5 C8 1.389 1.384
C10 C15 1.373 1.393
C10 N17 1.394 1.397
C2 C1 1.386 1.396
C9 C8 1.488 1.507
C18 N17 1.369 1.347
C18 O23 1.224 1.213
C8 C6 1.376 1.383
C1 C4 1.406 1.432
C1 C3 1.374 1.396
C4 N7 1.156 1.136
C6 C3 1.374 1.380
C13 H1 1.080 1.079
C14 H2 1.080 1.080
C2 H3 1.080 1.080
C3 H4 1.080 1.080
C12 H5 1.080 1.080
C5 H6 1.080 1.080
C6 H7 1.080 1.080
C15 H8 1.080 1.080
C21 H9 1.100 1.090
C21 H10 1.100 1.090
C20 H11 1.100 1.090
C20 H12 1.100 1.090
C22 H13 1.100 1.090
C9 H14 1.100 1.090
C9 H15 1.100 1.090
N17 H16 1.000 0.969
N19 H17 0.999 1.009

Bond Angles for 09B

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N19 C22 H13 117.2 110.8
N19 C20 H11 111.2 110.0
N19 C20 H12 111.2 110.0
C12 C13 H1 119.6 120.1
C12 C11 C16 128.6 133.5
C12 C11 C10 121.7 120.6
C11 C12 H5 121.3 120.0
C13 C14 C15 120.8 120.4
C14 C13 H1 119.6 120.1
C13 C14 H2 119.6 119.8
C22 C21 C16 103.8 102.7
C22 C21 H9 111.4 110.8
C22 C21 H10 111.4 110.9
C22 C24 O25 122.5 120.0
C22 C24 O26 113.1 120.0
C21 C16 C20 109.7 106.1
C11 C16 C20 111.6 111.7
C16 C20 H11 111.2 110.0
C16 C20 H12 111.2 110.0
C11 C16 C21 113.4 111.3
C16 C21 H9 111.4 110.8
C16 C21 H10 111.4 110.8
C10 C11 C16 109.7 105.9
C11 C16 C18 102.3 105.1
C11 C10 N17 110.1 110.2
O25 C24 O26 124.3 120.0
C24 O26 C9 114.2 117.0
C16 C18 N17 108.2 106.7
C16 C18 O23 124.6 126.7
C15 C14 H2 119.6 119.8
C14 C15 H8 121.2 119.9
O26 C9 H14 112.7 109.5
O26 C9 H15 112.8 109.4
C5 C2 C1 118.7 119.8
C5 C2 H3 120.6 120.1
C5 C8 C6 120.7 120.3
C8 C5 H6 120.1 119.9
C10 C15 H8 121.2 119.9
C10 N17 C18 109.5 112.2
C10 N17 H16 125.3 123.9
C2 C1 C3 121.1 119.7
C1 C2 H3 120.7 120.1
N17 C18 O23 127.1 126.6
C18 N17 H16 125.2 124.0
C8 C6 H7 120.2 120.0
C1 C4 N7 178.3 179.9
C1 C3 H4 119.9 120.0
C6 C3 H4 119.9 120.1
H9 C21 H10 107.5 110.7
H11 C20 H12 107.7 110.0
H14 C9 H15 106.0 109.5

Torsion Angles for 09B

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C22 N19 C20 H11 112.1 265.8
C22 N19 C20 H12 232.1 144.5
N19 C22 C21 H9 95.0 154.9
N19 C22 C21 H10 215.0 278.3
N19 C22 C24 O25 353.7 13.9
N19 C22 C24 O26 175.2 193.9
C16 C20 N19 H11 240.0 119.3
C16 C20 N19 H12 120.0 240.6
H11 C20 N19 H12 240.0 121.3
C12 C13 C14 C15 1.5 0.2
C14 C13 C12 H1 180.0 179.7
C12 C13 C14 H2 181.6 180.2
C11 C12 C13 H1 178.8 180.4
C12 C11 C16 C20 57.3 58.9
C12 C11 C16 C21 292.9 300.6
C10 C11 C12 C16 178.8 179.4
C12 C11 C16 C18 176.9 180.0
C12 C11 C10 N17 180.9 180.0
C12 C13 C14 H1 180.0 180.3
C15 C14 C13 H2 180.0 180.0
C13 C14 C15 H8 179.2 180.0
C21 C22 C24 O25 235.1 260.0
C21 C22 C24 O26 56.7 80.0
C22 C21 C16 C20 20.9 338.6
C11 C16 C21 C22 146.4 100.2
C16 C21 C22 H9 240.0 241.7
C16 C21 C22 H10 120.0 118.4
H9 C21 C22 H10 240.0 236.7
O25 C24 C22 O26 178.5 180.0
C22 C24 O26 C9 175.3 180.0
N19 C20 C16 H11 120.0 240.7
N19 C20 C16 H12 240.0 119.4
C11 C16 C20 C21 233.5 238.5
C20 C16 C21 H9 260.9 220.3
C20 C16 C21 H10 140.9 97.1
C10 C11 C16 C20 238.4 239.5
C11 C16 C20 C18 113.9 117.3
C20 C16 C18 N17 123.0 120.7
C20 C16 C18 O23 302.1 300.8
H11 C20 C16 H12 120.0 238.7
C22 C21 C16 H9 120.0 118.3
C22 C21 C16 H10 240.0 241.5
C11 C16 C21 C20 125.5 121.7
C21 C16 C20 H11 231.5 117.9
C21 C16 C20 H12 111.5 239.2
C10 C11 C16 C21 113.9 121.1
C11 C16 C21 C18 247.4 243.2
C21 C16 C18 N17 243.6 238.9
C21 C16 C18 O23 62.7 59.1
H9 C21 C16 H10 120.0 123.2
C12 C11 C16 C10 179.0 179.4
C16 C11 C12 H5 1.4 0.2
C22 C21 C16 C11 146.4 100.2
C21 C16 C11 C20 235.5 241.6
C11 C16 C20 H11 105.0 356.5
C11 C16 C20 H12 344.9 117.8
C11 C16 C21 H9 26.4 341.9
C11 C16 C21 H10 266.4 218.7
C16 C11 C10 N17 359.9 359.5
C11 C16 C18 N17 3.4 359.5
C11 C16 C18 O23 182.6 179.7
C12 C11 C10 C16 181.0 180.5
C10 C11 C12 H5 180.2 179.5
C10 C11 C16 C18 358.0 0.6
C11 C10 C15 H8 179.8 179.5
C11 C10 N17 C18 2.4 0.2
C11 C10 N17 H16 182.4 180.0
C22 C24 O25 O26 181.7 180.0
O25 C24 O26 C9 356.8 0.0
C22 C24 O26 O25 178.5 180.0
C24 O26 C9 H14 301.6 60.0
C24 O26 C9 H15 61.6 300.0
C11 C16 C18 C20 240.5 238.8
C11 C16 C18 C21 119.8 120.6
C10 N17 C18 C16 356.3 0.2
N17 C18 C16 O23 180.9 179.9
C16 C18 N17 H16 176.3 180.4
C15 C14 C13 H1 181.5 179.9
C13 C14 C15 H2 180.0 180.0
C10 C15 C14 H8 180.0 180.1
H14 C9 O26 H15 240.0 120.0
C5 C2 C1 C3 359.0 359.7
C1 C2 C5 H3 180.0 180.2
C8 C5 C2 C1 0.9 0.0
C8 C5 C2 H3 180.9 179.8
C5 C8 C6 H7 180.2 180.2
C12 C11 C10 C15 0.4 0.9
C10 C15 C14 H2 179.1 180.1
C14 C15 C10 H8 180.0 179.9
N17 C10 C11 C16 359.9 359.5
C16 C18 N17 C10 356.3 0.2
N17 C10 C15 H8 359.3 0.6
C10 N17 C18 O23 177.2 180.0
C18 N17 C10 H16 180.0 180.2
C5 C2 C1 H3 180.0 179.8
C2 C1 C4 N7 86.5 244.8
C2 C1 C3 H4 180.8 180.0
C9 C8 C5 H6 0.6 360.0
C9 C8 C6 H7 359.1 0.2
C16 C18 N17 O23 179.1 180.1
C10 N17 C18 H16 180.0 179.8
C16 C18 O23 N17 181.1 179.8
O23 C18 N17 H16 357.2 0.3
C6 C8 C5 H6 179.5 180.0
C8 C6 C3 H4 179.6 180.0
C3 C1 C2 H3 179.0 180.0
C3 C1 C4 N7 267.2 64.8
C6 C3 C1 H4 180.0 180.5
C2 C1 C3 C6 0.8 0.6
C1 C3 C6 H4 180.0 179.5
H1 C13 C14 C15 181.5 179.9
H1 C13 C14 H2 1.5 359.9
C13 C14 H2 C15 180.0 180.0
H2 C14 C13 H1 1.5 359.9
H2 C14 C15 H8 359.2 360.0
C5 C2 H3 C1 180.0 180.2
H3 C2 C1 C3 179.0 180.0
H5 C12 C13 H1 358.8 0.2
H5 C12 C11 C16 1.4 0.2
H5 C12 C11 C10 180.2 179.5
H6 C5 C2 C1 180.9 180.0
H6 C5 C2 H3 0.9 359.8
H6 C5 C8 C6 179.5 180.0
H7 C6 C3 H4 359.6 0.0
H8 C15 C14 H2 359.2 360.0
C22 C21 H9 C16 244.6 246.7
C22 C21 H9 H10 122.3 123.5
H9 C21 C16 C20 260.9 220.3
C16 C21 H9 H10 237.7 236.7
C22 C21 H10 C16 115.4 113.4
C22 C21 H10 H9 237.7 236.6
H10 C21 C16 C20 140.9 97.1
C16 C21 H10 H9 122.3 123.3
N19 C20 H11 H12 122.0 238.6
C16 C20 H11 H12 237.9 121.3
N19 C20 H12 H11 238.0 121.4
C16 C20 H12 H11 122.1 238.7
H13 C22 C21 C16 210.2 278.0
H13 C22 C21 H9 330.2 36.3
H13 C22 C21 H10 90.2 159.6
H13 C22 C24 O25 118.5 137.1
H13 C22 C24 O26 300.0 317.1
O26 C9 H14 H15 123.8 240.0
O26 C9 H15 H14 236.2 120.0
C10 N17 H16 C18 180.0 180.2
H16 N17 C18 O23 357.2 0.3
H17 N19 C22 H13 257.9 200.4
H17 N19 C20 H11 352.1 145.3
H17 N19 C20 H12 112.1 23.9