PDB Chemical Component 09B
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 09B
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N19 |
C22 |
1.482 |
1.486 |
N19 |
C20 |
1.487 |
1.481 |
C12 |
C13 |
1.380 |
1.384 |
C12 |
C11 |
1.379 |
1.377 |
C13 |
C14 |
1.387 |
1.383 |
C22 |
C21 |
1.517 |
1.552 |
C22 |
C24 |
1.510 |
1.506 |
C20 |
C16 |
1.508 |
1.531 |
C21 |
C16 |
1.502 |
1.536 |
C11 |
C16 |
1.467 |
1.502 |
C11 |
C10 |
1.360 |
1.392 |
C24 |
O25 |
1.217 |
1.208 |
C24 |
O26 |
1.335 |
1.343 |
C16 |
C18 |
1.510 |
1.504 |
C14 |
C15 |
1.379 |
1.379 |
O26 |
C9 |
1.425 |
1.452 |
C5 |
C2 |
1.388 |
1.379 |
C5 |
C8 |
1.389 |
1.384 |
C10 |
C15 |
1.373 |
1.393 |
C10 |
N17 |
1.394 |
1.397 |
C2 |
C1 |
1.386 |
1.396 |
C9 |
C8 |
1.488 |
1.507 |
C18 |
N17 |
1.369 |
1.347 |
C18 |
O23 |
1.224 |
1.213 |
C8 |
C6 |
1.376 |
1.383 |
C1 |
C4 |
1.406 |
1.432 |
C1 |
C3 |
1.374 |
1.396 |
C4 |
N7 |
1.156 |
1.136 |
C6 |
C3 |
1.374 |
1.380 |
C13 |
H1 |
1.080 |
1.079 |
C14 |
H2 |
1.080 |
1.080 |
C2 |
H3 |
1.080 |
1.080 |
C3 |
H4 |
1.080 |
1.080 |
C12 |
H5 |
1.080 |
1.080 |
C5 |
H6 |
1.080 |
1.080 |
C6 |
H7 |
1.080 |
1.080 |
C15 |
H8 |
1.080 |
1.080 |
C21 |
H9 |
1.100 |
1.090 |
C21 |
H10 |
1.100 |
1.090 |
C20 |
H11 |
1.100 |
1.090 |
C20 |
H12 |
1.100 |
1.090 |
C22 |
H13 |
1.100 |
1.090 |
C9 |
H14 |
1.100 |
1.090 |
C9 |
H15 |
1.100 |
1.090 |
N17 |
H16 |
1.000 |
0.969 |
N19 |
H17 |
0.999 |
1.009 |
Bond Angles for 09B
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N19 |
C22 |
H13 |
117.2 |
110.8 |
N19 |
C20 |
H11 |
111.2 |
110.0 |
N19 |
C20 |
H12 |
111.2 |
110.0 |
C12 |
C13 |
H1 |
119.6 |
120.1 |
C12 |
C11 |
C16 |
128.6 |
133.5 |
C12 |
C11 |
C10 |
121.7 |
120.6 |
C11 |
C12 |
H5 |
121.3 |
120.0 |
C13 |
C14 |
C15 |
120.8 |
120.4 |
C14 |
C13 |
H1 |
119.6 |
120.1 |
C13 |
C14 |
H2 |
119.6 |
119.8 |
C22 |
C21 |
C16 |
103.8 |
102.7 |
C22 |
C21 |
H9 |
111.4 |
110.8 |
C22 |
C21 |
H10 |
111.4 |
110.9 |
C22 |
C24 |
O25 |
122.5 |
120.0 |
C22 |
C24 |
O26 |
113.1 |
120.0 |
C21 |
C16 |
C20 |
109.7 |
106.1 |
C11 |
C16 |
C20 |
111.6 |
111.7 |
C16 |
C20 |
H11 |
111.2 |
110.0 |
C16 |
C20 |
H12 |
111.2 |
110.0 |
C11 |
C16 |
C21 |
113.4 |
111.3 |
C16 |
C21 |
H9 |
111.4 |
110.8 |
C16 |
C21 |
H10 |
111.4 |
110.8 |
C10 |
C11 |
C16 |
109.7 |
105.9 |
C11 |
C16 |
C18 |
102.3 |
105.1 |
C11 |
C10 |
N17 |
110.1 |
110.2 |
O25 |
C24 |
O26 |
124.3 |
120.0 |
C24 |
O26 |
C9 |
114.2 |
117.0 |
C16 |
C18 |
N17 |
108.2 |
106.7 |
C16 |
C18 |
O23 |
124.6 |
126.7 |
C15 |
C14 |
H2 |
119.6 |
119.8 |
C14 |
C15 |
H8 |
121.2 |
119.9 |
O26 |
C9 |
H14 |
112.7 |
109.5 |
O26 |
C9 |
H15 |
112.8 |
109.4 |
C5 |
C2 |
C1 |
118.7 |
119.8 |
C5 |
C2 |
H3 |
120.6 |
120.1 |
C5 |
C8 |
C6 |
120.7 |
120.3 |
C8 |
C5 |
H6 |
120.1 |
119.9 |
C10 |
C15 |
H8 |
121.2 |
119.9 |
C10 |
N17 |
C18 |
109.5 |
112.2 |
C10 |
N17 |
H16 |
125.3 |
123.9 |
C2 |
C1 |
C3 |
121.1 |
119.7 |
C1 |
C2 |
H3 |
120.7 |
120.1 |
N17 |
C18 |
O23 |
127.1 |
126.6 |
C18 |
N17 |
H16 |
125.2 |
124.0 |
C8 |
C6 |
H7 |
120.2 |
120.0 |
C1 |
C4 |
N7 |
178.3 |
179.9 |
C1 |
C3 |
H4 |
119.9 |
120.0 |
C6 |
C3 |
H4 |
119.9 |
120.1 |
H9 |
C21 |
H10 |
107.5 |
110.7 |
H11 |
C20 |
H12 |
107.7 |
110.0 |
H14 |
C9 |
H15 |
106.0 |
109.5 |
Torsion Angles for 09B
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C22 |
N19 |
C20 |
H11 |
112.1 |
265.8 |
C22 |
N19 |
C20 |
H12 |
232.1 |
144.5 |
N19 |
C22 |
C21 |
H9 |
95.0 |
154.9 |
N19 |
C22 |
C21 |
H10 |
215.0 |
278.3 |
N19 |
C22 |
C24 |
O25 |
353.7 |
13.9 |
N19 |
C22 |
C24 |
O26 |
175.2 |
193.9 |
C16 |
C20 |
N19 |
H11 |
240.0 |
119.3 |
C16 |
C20 |
N19 |
H12 |
120.0 |
240.6 |
H11 |
C20 |
N19 |
H12 |
240.0 |
121.3 |
C12 |
C13 |
C14 |
C15 |
1.5 |
0.2 |
C14 |
C13 |
C12 |
H1 |
180.0 |
179.7 |
C12 |
C13 |
C14 |
H2 |
181.6 |
180.2 |
C11 |
C12 |
C13 |
H1 |
178.8 |
180.4 |
C12 |
C11 |
C16 |
C20 |
57.3 |
58.9 |
C12 |
C11 |
C16 |
C21 |
292.9 |
300.6 |
C10 |
C11 |
C12 |
C16 |
178.8 |
179.4 |
C12 |
C11 |
C16 |
C18 |
176.9 |
180.0 |
C12 |
C11 |
C10 |
N17 |
180.9 |
180.0 |
C12 |
C13 |
C14 |
H1 |
180.0 |
180.3 |
C15 |
C14 |
C13 |
H2 |
180.0 |
180.0 |
C13 |
C14 |
C15 |
H8 |
179.2 |
180.0 |
C21 |
C22 |
C24 |
O25 |
235.1 |
260.0 |
C21 |
C22 |
C24 |
O26 |
56.7 |
80.0 |
C22 |
C21 |
C16 |
C20 |
20.9 |
338.6 |
C11 |
C16 |
C21 |
C22 |
146.4 |
100.2 |
C16 |
C21 |
C22 |
H9 |
240.0 |
241.7 |
C16 |
C21 |
C22 |
H10 |
120.0 |
118.4 |
H9 |
C21 |
C22 |
H10 |
240.0 |
236.7 |
O25 |
C24 |
C22 |
O26 |
178.5 |
180.0 |
C22 |
C24 |
O26 |
C9 |
175.3 |
180.0 |
N19 |
C20 |
C16 |
H11 |
120.0 |
240.7 |
N19 |
C20 |
C16 |
H12 |
240.0 |
119.4 |
C11 |
C16 |
C20 |
C21 |
233.5 |
238.5 |
C20 |
C16 |
C21 |
H9 |
260.9 |
220.3 |
C20 |
C16 |
C21 |
H10 |
140.9 |
97.1 |
C10 |
C11 |
C16 |
C20 |
238.4 |
239.5 |
C11 |
C16 |
C20 |
C18 |
113.9 |
117.3 |
C20 |
C16 |
C18 |
N17 |
123.0 |
120.7 |
C20 |
C16 |
C18 |
O23 |
302.1 |
300.8 |
H11 |
C20 |
C16 |
H12 |
120.0 |
238.7 |
C22 |
C21 |
C16 |
H9 |
120.0 |
118.3 |
C22 |
C21 |
C16 |
H10 |
240.0 |
241.5 |
C11 |
C16 |
C21 |
C20 |
125.5 |
121.7 |
C21 |
C16 |
C20 |
H11 |
231.5 |
117.9 |
C21 |
C16 |
C20 |
H12 |
111.5 |
239.2 |
C10 |
C11 |
C16 |
C21 |
113.9 |
121.1 |
C11 |
C16 |
C21 |
C18 |
247.4 |
243.2 |
C21 |
C16 |
C18 |
N17 |
243.6 |
238.9 |
C21 |
C16 |
C18 |
O23 |
62.7 |
59.1 |
H9 |
C21 |
C16 |
H10 |
120.0 |
123.2 |
C12 |
C11 |
C16 |
C10 |
179.0 |
179.4 |
C16 |
C11 |
C12 |
H5 |
1.4 |
0.2 |
C22 |
C21 |
C16 |
C11 |
146.4 |
100.2 |
C21 |
C16 |
C11 |
C20 |
235.5 |
241.6 |
C11 |
C16 |
C20 |
H11 |
105.0 |
356.5 |
C11 |
C16 |
C20 |
H12 |
344.9 |
117.8 |
C11 |
C16 |
C21 |
H9 |
26.4 |
341.9 |
C11 |
C16 |
C21 |
H10 |
266.4 |
218.7 |
C16 |
C11 |
C10 |
N17 |
359.9 |
359.5 |
C11 |
C16 |
C18 |
N17 |
3.4 |
359.5 |
C11 |
C16 |
C18 |
O23 |
182.6 |
179.7 |
C12 |
C11 |
C10 |
C16 |
181.0 |
180.5 |
C10 |
C11 |
C12 |
H5 |
180.2 |
179.5 |
C10 |
C11 |
C16 |
C18 |
358.0 |
0.6 |
C11 |
C10 |
C15 |
H8 |
179.8 |
179.5 |
C11 |
C10 |
N17 |
C18 |
2.4 |
0.2 |
C11 |
C10 |
N17 |
H16 |
182.4 |
180.0 |
C22 |
C24 |
O25 |
O26 |
181.7 |
180.0 |
O25 |
C24 |
O26 |
C9 |
356.8 |
0.0 |
C22 |
C24 |
O26 |
O25 |
178.5 |
180.0 |
C24 |
O26 |
C9 |
H14 |
301.6 |
60.0 |
C24 |
O26 |
C9 |
H15 |
61.6 |
300.0 |
C11 |
C16 |
C18 |
C20 |
240.5 |
238.8 |
C11 |
C16 |
C18 |
C21 |
119.8 |
120.6 |
C10 |
N17 |
C18 |
C16 |
356.3 |
0.2 |
N17 |
C18 |
C16 |
O23 |
180.9 |
179.9 |
C16 |
C18 |
N17 |
H16 |
176.3 |
180.4 |
C15 |
C14 |
C13 |
H1 |
181.5 |
179.9 |
C13 |
C14 |
C15 |
H2 |
180.0 |
180.0 |
C10 |
C15 |
C14 |
H8 |
180.0 |
180.1 |
H14 |
C9 |
O26 |
H15 |
240.0 |
120.0 |
C5 |
C2 |
C1 |
C3 |
359.0 |
359.7 |
C1 |
C2 |
C5 |
H3 |
180.0 |
180.2 |
C8 |
C5 |
C2 |
C1 |
0.9 |
0.0 |
C8 |
C5 |
C2 |
H3 |
180.9 |
179.8 |
C5 |
C8 |
C6 |
H7 |
180.2 |
180.2 |
C12 |
C11 |
C10 |
C15 |
0.4 |
0.9 |
C10 |
C15 |
C14 |
H2 |
179.1 |
180.1 |
C14 |
C15 |
C10 |
H8 |
180.0 |
179.9 |
N17 |
C10 |
C11 |
C16 |
359.9 |
359.5 |
C16 |
C18 |
N17 |
C10 |
356.3 |
0.2 |
N17 |
C10 |
C15 |
H8 |
359.3 |
0.6 |
C10 |
N17 |
C18 |
O23 |
177.2 |
180.0 |
C18 |
N17 |
C10 |
H16 |
180.0 |
180.2 |
C5 |
C2 |
C1 |
H3 |
180.0 |
179.8 |
C2 |
C1 |
C4 |
N7 |
86.5 |
244.8 |
C2 |
C1 |
C3 |
H4 |
180.8 |
180.0 |
C9 |
C8 |
C5 |
H6 |
0.6 |
360.0 |
C9 |
C8 |
C6 |
H7 |
359.1 |
0.2 |
C16 |
C18 |
N17 |
O23 |
179.1 |
180.1 |
C10 |
N17 |
C18 |
H16 |
180.0 |
179.8 |
C16 |
C18 |
O23 |
N17 |
181.1 |
179.8 |
O23 |
C18 |
N17 |
H16 |
357.2 |
0.3 |
C6 |
C8 |
C5 |
H6 |
179.5 |
180.0 |
C8 |
C6 |
C3 |
H4 |
179.6 |
180.0 |
C3 |
C1 |
C2 |
H3 |
179.0 |
180.0 |
C3 |
C1 |
C4 |
N7 |
267.2 |
64.8 |
C6 |
C3 |
C1 |
H4 |
180.0 |
180.5 |
C2 |
C1 |
C3 |
C6 |
0.8 |
0.6 |
C1 |
C3 |
C6 |
H4 |
180.0 |
179.5 |
H1 |
C13 |
C14 |
C15 |
181.5 |
179.9 |
H1 |
C13 |
C14 |
H2 |
1.5 |
359.9 |
C13 |
C14 |
H2 |
C15 |
180.0 |
180.0 |
H2 |
C14 |
C13 |
H1 |
1.5 |
359.9 |
H2 |
C14 |
C15 |
H8 |
359.2 |
360.0 |
C5 |
C2 |
H3 |
C1 |
180.0 |
180.2 |
H3 |
C2 |
C1 |
C3 |
179.0 |
180.0 |
H5 |
C12 |
C13 |
H1 |
358.8 |
0.2 |
H5 |
C12 |
C11 |
C16 |
1.4 |
0.2 |
H5 |
C12 |
C11 |
C10 |
180.2 |
179.5 |
H6 |
C5 |
C2 |
C1 |
180.9 |
180.0 |
H6 |
C5 |
C2 |
H3 |
0.9 |
359.8 |
H6 |
C5 |
C8 |
C6 |
179.5 |
180.0 |
H7 |
C6 |
C3 |
H4 |
359.6 |
0.0 |
H8 |
C15 |
C14 |
H2 |
359.2 |
360.0 |
C22 |
C21 |
H9 |
C16 |
244.6 |
246.7 |
C22 |
C21 |
H9 |
H10 |
122.3 |
123.5 |
H9 |
C21 |
C16 |
C20 |
260.9 |
220.3 |
C16 |
C21 |
H9 |
H10 |
237.7 |
236.7 |
C22 |
C21 |
H10 |
C16 |
115.4 |
113.4 |
C22 |
C21 |
H10 |
H9 |
237.7 |
236.6 |
H10 |
C21 |
C16 |
C20 |
140.9 |
97.1 |
C16 |
C21 |
H10 |
H9 |
122.3 |
123.3 |
N19 |
C20 |
H11 |
H12 |
122.0 |
238.6 |
C16 |
C20 |
H11 |
H12 |
237.9 |
121.3 |
N19 |
C20 |
H12 |
H11 |
238.0 |
121.4 |
C16 |
C20 |
H12 |
H11 |
122.1 |
238.7 |
H13 |
C22 |
C21 |
C16 |
210.2 |
278.0 |
H13 |
C22 |
C21 |
H9 |
330.2 |
36.3 |
H13 |
C22 |
C21 |
H10 |
90.2 |
159.6 |
H13 |
C22 |
C24 |
O25 |
118.5 |
137.1 |
H13 |
C22 |
C24 |
O26 |
300.0 |
317.1 |
O26 |
C9 |
H14 |
H15 |
123.8 |
240.0 |
O26 |
C9 |
H15 |
H14 |
236.2 |
120.0 |
C10 |
N17 |
H16 |
C18 |
180.0 |
180.2 |
H16 |
N17 |
C18 |
O23 |
357.2 |
0.3 |
H17 |
N19 |
C22 |
H13 |
257.9 |
200.4 |
H17 |
N19 |
C20 |
H11 |
352.1 |
145.3 |
H17 |
N19 |
C20 |
H12 |
112.1 |
23.9 |