PDB Chemical Component 09A

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 09A

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N10 C7 1.487 1.486
N10 C13 1.484 1.482
C3 C5 1.383 1.383
C3 C1 1.377 1.377
C5 C8 1.382 1.383
C7 C4 1.508 1.552
C7 C9 1.510 1.506
C13 C2 1.507 1.530
C4 C2 1.506 1.537
C1 C2 1.487 1.502
C1 C17 1.365 1.392
C9 O12 1.220 1.209
C9 O11 1.365 1.342
C2 C14 1.511 1.504
C8 C6 1.378 1.379
O11 C18 1.429 1.452
C24 C23 1.383 1.382
C24 C19 1.385 1.383
C23 C22 1.381 1.382
C17 C6 1.377 1.394
C17 N16 1.387 1.396
C18 C19 1.501 1.506
C19 C20 1.381 1.382
C14 N16 1.375 1.347
C14 O15 1.220 1.213
C22 C21 1.381 1.382
C20 C21 1.383 1.383
C22 H1 1.080 1.080
C5 H2 1.079 1.080
C21 H3 1.080 1.080
C23 H4 1.080 1.080
C8 H5 1.080 1.079
C3 H6 1.080 1.080
C20 H7 1.080 1.080
C24 H8 1.079 1.080
C6 H9 1.080 1.080
C4 H10 1.100 1.090
C4 H11 1.100 1.090
C13 H12 1.101 1.090
C13 H13 1.100 1.091
C7 H14 1.100 1.090
C18 H15 1.100 1.091
C18 H16 1.100 1.090
N16 H17 1.000 0.970
N10 H18 1.000 1.009

Bond Angles for 09A

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N10 C7 H14 114.0 110.8
N10 C13 H12 111.2 110.0
N10 C13 H13 111.2 110.0
C3 C5 H2 119.5 120.1
C3 C1 C2 130.2 133.6
C3 C1 C17 120.1 120.6
C1 C3 H6 120.9 120.0
C5 C8 C6 121.0 120.3
C8 C5 H2 119.5 120.0
C5 C8 H5 119.5 119.9
C7 C4 C2 106.8 102.7
C7 C4 H10 110.4 110.8
C7 C4 H11 110.4 110.9
C7 C9 O12 123.0 120.0
C7 C9 O11 110.5 120.0
C4 C2 C13 108.6 106.1
C1 C2 C13 113.6 111.6
C2 C13 H12 111.2 110.0
C2 C13 H13 111.2 110.0
C1 C2 C4 114.2 111.3
C2 C4 H10 110.4 110.8
C2 C4 H11 110.4 110.7
C17 C1 C2 109.7 105.8
C1 C2 C14 101.5 105.1
C1 C17 N16 110.3 110.3
O12 C9 O11 126.4 119.9
C9 O11 C18 116.4 117.1
C2 C14 N16 108.8 106.7
C2 C14 O15 125.1 126.7
C6 C8 H5 119.5 119.9
C8 C6 H9 121.5 119.9
O11 C18 H15 110.7 109.4
O11 C18 H16 110.7 109.5
C24 C23 H4 119.9 120.0
C19 C24 H8 119.7 120.0
C23 C22 H1 120.3 120.1
C17 C6 H9 121.5 119.9
C17 N16 C14 109.7 112.1
C17 N16 H17 125.2 123.9
C19 C20 H7 119.6 120.0
N16 C14 O15 126.0 126.6
C14 N16 H17 125.2 123.9
C21 C22 H1 120.3 120.0
C22 C21 H3 119.9 120.0
C20 C21 H3 119.9 120.0
H10 C4 H11 108.5 110.7
H12 C13 H13 107.7 110.0
H15 C18 H16 108.2 109.5

Torsion Angles for 09A

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C7 N10 C13 H12 108.1 265.8
C7 N10 C13 H13 228.1 144.5
N10 C7 C4 H10 98.3 154.9
N10 C7 C4 H11 218.2 278.3
N10 C7 C9 O12 352.7 13.9
N10 C7 C9 O11 174.4 193.9
C2 C13 N10 H12 240.0 119.4
C2 C13 N10 H13 120.0 240.7
H12 C13 N10 H13 240.0 121.3
C3 C5 C8 C6 0.3 0.2
C8 C5 C3 H2 180.0 179.7
C3 C5 C8 H5 180.3 180.2
C1 C3 C5 H2 179.9 180.3
C3 C1 C2 C13 57.9 58.9
C3 C1 C2 C4 292.5 300.6
C17 C1 C3 C2 180.2 179.5
C3 C1 C2 C14 179.7 180.1
C3 C1 C17 N16 180.5 179.9
C3 C5 C8 H2 180.0 180.3
C6 C8 C5 H5 180.0 180.0
C5 C8 C6 H9 179.8 180.0
C4 C7 C9 O12 238.5 260.0
C4 C7 C9 O11 60.2 80.0
C7 C4 C2 C13 15.4 338.6
C1 C2 C4 C7 143.4 100.2
C2 C4 C7 H10 240.0 241.7
C2 C4 C7 H11 120.0 118.3
H10 C4 C7 H11 240.0 236.6
O12 C9 C7 O11 178.3 180.0
C7 C9 O11 C18 171.8 180.0
N10 C13 C2 H12 120.0 240.7
N10 C13 C2 H13 240.0 119.3
C1 C2 C13 C4 231.7 238.6
C13 C2 C4 H10 255.4 220.3
C13 C2 C4 H11 135.4 97.1
C17 C1 C2 C13 237.7 239.4
C1 C2 C13 C14 115.1 117.3
C13 C2 C14 N16 122.3 120.7
C13 C2 C14 O15 298.5 300.9
H12 C13 C2 H13 120.0 238.7
C7 C4 C2 H10 120.0 118.3
C7 C4 C2 H11 240.0 241.5
C1 C2 C4 C13 128.0 121.6
C4 C2 C13 H12 237.6 117.9
C4 C2 C13 H13 117.5 239.2
C17 C1 C2 C4 112.3 121.1
C1 C2 C4 C14 249.5 243.2
C4 C2 C14 N16 240.8 239.0
C4 C2 C14 O15 57.0 59.1
H10 C4 C2 H11 120.0 123.2
C3 C1 C2 C17 180.2 179.5
C2 C1 C3 H6 359.6 0.0
C7 C4 C2 C1 143.4 100.2
C4 C2 C1 C13 234.6 241.7
C1 C2 C13 H12 109.2 356.5
C1 C2 C13 H13 349.2 117.8
C1 C2 C4 H10 23.4 341.9
C1 C2 C4 H11 263.4 218.7
C2 C1 C17 N16 0.7 359.5
C1 C2 C14 N16 0.2 359.5
C1 C2 C14 O15 176.4 179.7
C3 C1 C17 C2 179.8 180.4
C17 C1 C3 H6 179.8 179.5
C17 C1 C2 C14 359.5 0.6
C1 C17 C6 H9 179.8 179.6
C1 C17 N16 C14 359.4 0.2
C1 C17 N16 H17 179.4 179.9
C7 C9 O12 O11 182.0 180.0
O12 C9 O11 C18 353.6 360.0
C7 C9 O11 O12 178.2 180.0
C9 O11 C18 H15 308.7 60.0
C9 O11 C18 H16 68.7 300.0
C1 C2 C14 C13 237.9 238.8
C1 C2 C14 C4 119.4 120.6
C17 N16 C14 C2 0.2 0.2
N16 C14 C2 O15 183.8 179.8
C2 C14 N16 H17 180.2 180.4
C6 C8 C5 H2 180.3 179.9
C5 C8 C6 H5 180.0 180.0
C17 C6 C8 H9 180.0 180.1
H15 C18 O11 H16 240.0 119.9
C24 C23 C22 H1 179.8 180.3
C19 C24 C23 H4 180.0 179.4
C24 C19 C20 H7 179.9 179.4
C21 C22 C23 H1 180.0 179.7
C23 C22 C21 H3 180.2 180.3
C3 C1 C17 C6 0.4 0.7
C17 C6 C8 H5 179.8 180.1
C8 C6 C17 H9 180.0 179.9
N16 C17 C1 C2 0.7 359.5
C2 C14 N16 C17 0.2 0.2
N16 C17 C6 H9 359.7 0.5
C17 N16 C14 O15 184.1 180.0
C14 N16 C17 H17 180.0 180.3
C18 C19 C24 H8 0.4 359.4
C18 C19 C20 H7 359.6 0.3
C19 C20 C21 H3 179.9 180.0
C2 C14 N16 O15 176.1 180.2
C17 N16 C14 H17 180.0 179.7
C2 C14 O15 N16 184.5 179.8
O15 C14 N16 H17 4.1 0.3
C23 C22 C21 H1 180.0 180.3
C20 C21 C22 H3 180.0 180.0
C20 C21 C22 H1 180.3 180.0
C22 C21 C20 H3 180.0 180.0
H1 C22 C21 H3 0.3 0.0
H2 C5 C8 C6 180.3 179.9
H2 C5 C8 H5 0.3 359.9
H3 C21 C22 H1 0.3 0.0
H4 C23 C22 H1 359.8 0.3
C5 C8 H5 C6 180.0 180.0
H5 C8 C5 H2 0.3 359.9
H5 C8 C6 H9 359.9 360.0
H6 C3 C5 H2 359.8 0.3
H6 C3 C1 C2 359.6 0.0
H6 C3 C1 C17 179.8 179.5
H7 C20 C21 H3 359.9 360.0
H8 C24 C23 H4 0.1 359.9
H9 C6 C8 H5 359.9 360.0
C7 C4 H10 C2 242.2 246.7
C7 C4 H10 H11 121.1 123.5
H10 C4 C2 C13 255.4 220.3
C2 C4 H10 H11 238.9 236.7
C7 C4 H11 C2 117.8 113.3
C7 C4 H11 H10 238.9 236.6
H11 C4 C2 C13 135.4 97.1
C2 C4 H11 H10 121.1 123.3
N10 C13 H12 H13 122.0 238.7
C2 C13 H12 H13 237.9 121.4
N10 C13 H13 H12 238.0 121.3
C2 C13 H13 H12 122.1 238.6
H14 C7 C4 C2 214.9 278.0
H14 C7 C4 H10 334.9 36.3
H14 C7 C4 H11 94.9 159.7
H14 C7 C9 O12 116.3 137.0
H14 C7 C9 O11 298.0 317.1
O11 C18 H15 H16 121.5 240.0
O11 C18 H16 H15 238.5 119.9
C17 N16 H17 C14 180.0 180.3
H17 N16 C14 O15 4.1 0.3
H18 N10 C7 H14 263.0 200.4
H18 N10 C13 H12 348.1 145.2
H18 N10 C13 H13 108.1 23.9