PDB Chemical Component 097

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 097

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C4 1.342 1.348
N1 C5 1.456 1.465
N1 HN1 1.000 0.970
C2 C1 1.516 1.530
C2 H21 1.100 1.090
C2 H22 1.100 1.090
C2 H23 1.100 1.091
O2 C10 1.232 1.213
C4 C14 1.521 1.506
C4 O1 1.231 1.213
O3 N3 1.376 1.416
O3 HO3 0.950 0.966
C5 C6 1.534 1.530
C5 C10 1.519 1.508
C5 H5 1.100 1.090
C6 C8 1.541 1.530
C6 C9 1.538 1.530
C6 C7 1.539 1.529
C8 H81 1.100 1.091
C8 H82 1.100 1.090
C8 H83 1.100 1.090
C9 H91 1.100 1.090
C9 H92 1.100 1.090
C9 H93 1.100 1.091
C10 N2 1.348 1.348
C11 N2 1.460 1.464
C11 H111 1.100 1.090
C11 H112 1.100 1.090
C11 H113 1.100 1.090
N3 C12 1.342 1.347
N3 HN3 1.000 0.971
C12 O4 1.229 1.213
C12 C13 1.503 1.508
C13 O5 1.420 1.428
C13 C14 1.528 1.530
O5 HO5 0.950 0.967
C14 C15 1.535 1.530
C15 C1 1.537 1.529
C15 H151 1.100 1.090
C15 H152 1.100 1.091
C1 C3 1.528 1.530
C1 H1 1.100 1.091
C3 H31 1.100 1.091
C3 H32 1.100 1.090
C3 H33 1.100 1.090
C7 H71 1.100 1.090
C7 H72 1.100 1.090
C7 H73 1.100 1.090
N2 HN2 1.000 0.971
C13 H28 1.100 1.090
C14 H29 1.100 1.091

Bond Angles for 097

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C4 N1 C5 117.0 120.0
C4 N1 HN1 121.5 120.0
N1 C4 C14 113.8 120.0
N1 C4 O1 125.1 119.9
C5 N1 HN1 121.5 120.0
N1 C5 C6 109.7 109.5
N1 C5 C10 111.8 109.4
N1 C5 H5 108.2 109.5
C1 C2 H21 109.5 109.5
C1 C2 H22 109.5 109.5
C1 C2 H23 109.4 109.4
C2 C1 C15 111.5 109.5
C2 C1 C3 109.6 109.5
C2 C1 H1 108.2 109.4
H21 C2 H22 109.5 109.5
H21 C2 H23 109.5 109.4
H22 C2 H23 109.5 109.5
O2 C10 C5 120.6 120.0
O2 C10 N2 125.5 120.0
C14 C4 O1 121.1 120.0
C4 C14 C13 108.9 109.5
C4 C14 C15 109.9 109.5
C4 C14 H29 110.0 109.4
N3 O3 HO3 109.5 114.0
O3 N3 C12 110.2 120.0
O3 N3 HN3 124.9 120.0
C6 C5 C10 111.0 109.5
C6 C5 H5 109.1 109.5
C5 C6 C8 109.6 109.5
C5 C6 C9 109.8 109.5
C5 C6 C7 108.7 109.5
C10 C5 H5 106.9 109.5
C5 C10 N2 113.9 120.0
C8 C6 C9 109.7 109.4
C8 C6 C7 109.4 109.5
C6 C8 H81 109.5 109.5
C6 C8 H82 109.5 109.5
C6 C8 H83 109.5 109.4
C9 C6 C7 109.6 109.5
C6 C9 H91 109.5 109.5
C6 C9 H92 109.5 109.5
C6 C9 H93 109.5 109.5
C6 C7 H71 109.5 109.5
C6 C7 H72 109.4 109.5
C6 C7 H73 109.5 109.5
H81 C8 H82 109.4 109.5
H81 C8 H83 109.5 109.4
H82 C8 H83 109.5 109.4
H91 C9 H92 109.5 109.4
H91 C9 H93 109.4 109.4
H92 C9 H93 109.5 109.5
C10 N2 C11 118.1 120.0
C10 N2 HN2 121.0 120.0
N2 C11 H111 109.5 109.5
N2 C11 H112 109.5 109.5
N2 C11 H113 109.4 109.5
C11 N2 HN2 120.9 120.1
H111 C11 H112 109.4 109.5
H111 C11 H113 109.5 109.4
H112 C11 H113 109.5 109.4
C12 N3 HN3 124.9 120.0
N3 C12 O4 122.6 120.0
N3 C12 C13 116.6 120.0
O4 C12 C13 120.8 120.0
C12 C13 O5 111.1 109.5
C12 C13 C14 112.4 109.4
C12 C13 H28 106.9 109.5
O5 C13 C14 111.3 109.5
C13 O5 HO5 109.5 114.1
O5 C13 H28 108.2 109.5
C13 C14 C15 110.8 109.5
C14 C13 H28 106.7 109.5
C13 C14 H29 109.1 109.5
C14 C15 C1 114.3 109.5
C14 C15 H151 107.9 109.5
C14 C15 H152 106.8 109.5
C15 C14 H29 108.0 109.5
C1 C15 H151 107.9 109.5
C1 C15 H152 106.7 109.5
C15 C1 C3 110.1 109.5
C15 C1 H1 107.7 109.5
H151 C15 H152 113.3 109.5
C3 C1 H1 109.7 109.5
C1 C3 H31 109.5 109.4
C1 C3 H32 109.5 109.5
C1 C3 H33 109.5 109.5
H31 C3 H32 109.5 109.5
H31 C3 H33 109.4 109.5
H32 C3 H33 109.5 109.5
H71 C7 H72 109.5 109.4
H71 C7 H73 109.5 109.4
H72 C7 H73 109.5 109.5

Torsion Angles for 097

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C5 N1 C4 HN1 180.0 180.3
C4 N1 C5 C6 130.9 92.9
C4 N1 C5 C10 254.5 212.9
C4 N1 C5 H5 11.9 332.8
C14 C4 N1 O1 180.7 180.1
N1 C4 C14 C13 120.8 173.6
N1 C4 C14 C15 242.4 293.6
N1 C4 C14 H29 1.2 53.6
C4 N1 C5 HN1 180.0 179.7
C5 N1 C4 C14 181.9 175.3
C5 N1 C4 O1 1.1 355.2
O2 C10 C5 N1 313.3 340.4
C6 C5 N1 C10 236.4 240.0
C6 C5 N1 H5 119.0 120.0
N1 C5 C6 C8 56.5 64.8
N1 C5 C6 C9 177.1 184.8
N1 C5 C6 C7 297.0 304.8
C10 C5 N1 H5 242.6 240.0
N1 C5 C10 N2 132.4 160.4
C4 N1 HN1 C5 180.0 180.3
HN1 N1 C4 C14 1.9 355.0
HN1 N1 C4 O1 181.2 174.9
HN1 N1 C5 C6 310.9 273.1
HN1 N1 C5 C10 74.5 33.1
HN1 N1 C5 H5 191.9 153.1
H21 C2 C1 H22 240.0 239.9
H21 C2 C1 H23 120.0 119.9
H22 C2 C1 H23 240.0 240.0
C14 C15 C1 C2 56.0 292.0
C2 C1 C15 H151 296.0 172.0
C2 C1 C15 H152 173.9 52.0
C15 C1 C2 C3 122.2 240.0
C15 C1 C2 H1 241.7 120.0
C3 C1 C2 H1 119.6 240.0
C2 C1 C3 H31 306.7 60.0
C2 C1 C3 H32 66.7 180.0
C2 C1 C3 H33 186.8 300.0
C1 C2 H21 H22 120.0 120.1
C1 C2 H21 H23 240.0 240.1
H21 C2 C1 C15 73.5 79.2
H21 C2 C1 C3 311.3 199.2
H21 C2 C1 H1 191.7 319.2
H22 C2 H21 H23 120.0 120.0
C1 C2 H22 H21 240.0 239.9
C1 C2 H22 H23 120.0 119.9
H22 C2 C1 C15 193.4 199.3
H22 C2 C1 C3 71.3 319.3
H22 C2 C1 H1 311.7 79.3
H21 C2 H22 H23 240.0 240.0
C1 C2 H23 H21 120.0 119.9
C1 C2 H23 H22 240.0 240.0
H23 C2 C1 C15 313.4 319.3
H23 C2 C1 C3 191.3 79.3
H23 C2 C1 H1 71.7 199.3
H21 C2 H23 H22 120.0 120.0
N1 C5 C10 O2 313.3 340.4
C6 C5 C10 O2 76.2 100.4
O2 C10 C5 H5 195.1 220.4
C5 C10 O2 N2 178.9 180.0
O2 C10 N2 C11 355.9 4.8
O2 C10 N2 HN2 175.9 184.8
C14 C4 N1 C5 181.9 175.3
C14 C4 N1 HN1 1.9 355.0
N1 C4 C14 O1 179.3 179.9
C12 C13 C14 C4 177.7 185.6
O5 C13 C14 C4 303.1 305.5
C13 C14 C4 C15 238.4 240.0
C4 C14 C13 H28 60.9 65.6
C13 C14 C4 H29 119.5 120.0
C4 C14 C15 C1 68.0 322.8
C4 C14 C15 H151 188.0 82.9
C4 C14 C15 H152 310.1 202.9
C15 C14 C4 H29 241.2 240.0
O1 C4 N1 C5 1.1 355.2
O1 C4 N1 HN1 181.2 174.9
N1 C4 O1 C14 180.8 180.1
O1 C4 C14 C13 301.5 353.6
O1 C4 C14 C15 63.1 113.6
O1 C4 C14 H29 181.9 233.6
C12 N3 O3 HN3 180.0 179.9
O3 N3 C12 O4 352.2 5.5
O3 N3 C12 C13 171.4 185.6
HO3 O3 N3 C12 164.6 180.0
HO3 O3 N3 HN3 344.6 0.0
C6 C5 N1 HN1 310.9 273.1
N1 C5 C6 C10 124.0 120.0
N1 C5 C6 H5 241.6 240.0
O2 C10 C5 C6 76.2 100.4
C10 C5 C6 H5 117.5 120.0
C6 C5 C10 N2 255.2 280.4
C8 C6 C5 C9 239.4 240.0
C8 C6 C5 C7 119.6 120.0
C5 C6 C8 H81 309.1 59.9
C5 C6 C8 H82 69.1 180.0
C5 C6 C8 H83 189.1 300.0
C9 C6 C5 C7 240.1 240.0
C5 C6 C9 H91 241.2 63.3
C5 C6 C9 H92 1.2 183.3
C5 C6 C9 H93 121.3 303.3
C5 C6 C7 H71 340.5 60.0
C5 C6 C7 H72 100.5 180.0
C5 C6 C7 H73 220.5 300.0
C10 C5 N1 HN1 74.5 33.1
N1 C5 C10 C6 237.2 240.0
N1 C5 C10 H5 118.3 120.0
O2 C10 C5 N2 181.0 180.0
C6 C5 C10 H5 241.1 240.0
C10 C5 C6 C8 292.5 304.8
C10 C5 C6 C9 53.1 64.8
C10 C5 C6 C7 172.9 184.8
C5 C10 N2 C11 177.0 184.8
C5 C10 N2 HN2 357.0 4.8
H5 C5 N1 HN1 191.9 153.1
N1 C5 H5 C6 119.3 120.0
N1 C5 H5 C10 239.4 240.0
C6 C5 H5 C10 120.1 120.0
H5 C5 C6 C8 175.0 184.8
H5 C5 C6 C9 295.5 304.8
H5 C5 C6 C7 55.4 64.8
H5 C5 C10 N2 14.1 40.5
C8 C6 C5 C10 292.5 304.8
C8 C6 C5 H5 175.0 184.8
C5 C6 C8 C9 120.7 120.0
C5 C6 C8 C7 240.9 240.0
C9 C6 C8 C7 120.2 120.0
C8 C6 C9 H91 1.8 183.3
C8 C6 C9 H92 121.8 303.3
C8 C6 C9 H93 241.8 63.3
C8 C6 C7 H71 220.8 299.9
C8 C6 C7 H72 340.8 60.0
C8 C6 C7 H73 100.8 180.0
H81 C8 C6 H82 240.0 239.9
H81 C8 C6 H83 120.0 119.9
H82 C8 C6 H83 240.0 240.0
C9 C6 C5 C10 53.1 64.8
C9 C6 C5 H5 295.5 304.8
C5 C6 C9 C8 239.5 240.0
C5 C6 C9 C7 119.3 120.0
C8 C6 C9 C7 239.8 240.0
C9 C6 C8 H81 188.5 299.9
C9 C6 C8 H82 308.4 60.0
C9 C6 C8 H83 68.5 180.0
C9 C6 C7 H71 100.5 180.0
C9 C6 C7 H72 220.5 300.0
C9 C6 C7 H73 340.5 60.0
H91 C9 C6 H92 240.0 240.0
H91 C9 C6 H93 120.0 120.0
H92 C9 C6 H93 240.0 240.0
C7 C6 C5 C10 172.9 184.8
C7 C6 C5 H5 55.4 64.8
C5 C6 C7 C8 119.7 120.0
C5 C6 C7 C9 240.0 240.0
C8 C6 C7 C9 120.3 119.9
C7 C6 C8 H81 68.2 180.0
C7 C6 C8 H82 188.2 300.1
C7 C6 C8 H83 308.2 60.0
C7 C6 C9 H91 122.0 303.2
C7 C6 C9 H92 241.9 63.2
C7 C6 C9 H93 2.0 183.3
H71 C7 C6 H72 240.0 240.0
H71 C7 C6 H73 120.0 120.0
H72 C7 C6 H73 240.0 240.0
H81 C8 C6 C9 188.5 299.9
H81 C8 C6 C7 68.2 180.0
C6 C8 H81 H82 120.0 120.1
C6 C8 H81 H83 240.0 240.1
H82 C8 H81 H83 120.0 120.0
H82 C8 C6 C9 308.4 60.0
H82 C8 C6 C7 188.2 300.1
C6 C8 H82 H81 240.0 239.9
C6 C8 H82 H83 120.0 120.0
H81 C8 H82 H83 240.0 240.0
H83 C8 C6 C9 68.5 180.0
H83 C8 C6 C7 308.2 60.0
C6 C8 H83 H81 120.0 120.0
C6 C8 H83 H82 240.0 240.0
H81 C8 H83 H82 120.0 120.0
H91 C9 C6 C7 122.0 303.2
C6 C9 H91 H92 120.0 120.0
C6 C9 H91 H93 240.0 240.0
H92 C9 H91 H93 120.0 120.0
H92 C9 C6 C7 241.9 63.2
C6 C9 H92 H91 240.0 240.0
C6 C9 H92 H93 120.0 120.0
H91 C9 H92 H93 240.1 240.1
H93 C9 C6 C7 2.0 183.3
C6 C9 H93 H91 120.0 120.0
C6 C9 H93 H92 240.0 239.9
H91 C9 H93 H92 120.0 119.9
O2 C10 N2 C5 179.0 180.0
N2 C10 C5 H5 14.1 40.5
C10 N2 C11 H111 308.5 300.0
C10 N2 C11 H112 68.5 60.1
C10 N2 C11 H113 188.5 180.0
C11 N2 C10 HN2 180.0 180.0
C10 N2 C11 HN2 180.0 180.0
H111 C11 N2 H112 240.0 239.9
H111 C11 N2 H113 120.0 120.0
H112 C11 N2 H113 240.0 240.1
N2 C11 H111 H112 120.0 120.1
N2 C11 H111 H113 240.0 240.0
H111 C11 N2 HN2 128.5 119.9
H112 C11 H111 H113 120.0 119.9
N2 C11 H112 H111 240.0 239.9
N2 C11 H112 H113 120.0 120.0
H112 C11 N2 HN2 248.4 240.0
H111 C11 H112 H113 240.0 240.0
N2 C11 H113 H111 120.0 120.0
N2 C11 H113 H112 240.0 240.0
H113 C11 N2 HN2 8.5 360.0
H111 C11 H113 H112 120.0 120.0
C12 N3 O3 HO3 164.6 180.0
O3 N3 C12 HN3 180.0 180.1
O4 C12 N3 C13 180.8 179.9
N3 C12 C13 O5 122.9 157.2
N3 C12 C13 C14 248.4 277.2
N3 C12 C13 H28 5.1 37.2
HN3 N3 O3 HO3 344.6 0.0
O3 N3 HN3 C12 180.0 179.9
HN3 N3 C12 O4 172.2 185.4
HN3 N3 C12 C13 351.4 5.5
O4 C12 N3 HN3 172.2 185.4
N3 C12 O4 C13 179.1 180.1
O4 C12 C13 O5 302.1 337.3
O4 C12 C13 C14 67.5 97.3
O4 C12 C13 H28 184.3 217.3
C4 C14 C13 C12 177.7 185.6
C13 C12 N3 HN3 351.4 5.5
N3 C12 C13 O4 180.8 179.9
O5 C13 C12 C14 234.6 240.0
C12 C13 O5 HO5 291.5 60.0
O5 C13 C12 H28 117.8 120.1
C12 C13 C14 C15 56.7 65.6
C14 C13 C12 H28 243.2 240.0
C12 C13 C14 H29 297.8 305.5
C4 C14 C13 O5 303.1 305.5
C12 C13 O5 C14 126.0 119.9
C12 C13 O5 H28 243.0 240.0
O5 C13 C14 C15 182.0 185.5
C14 C13 O5 H28 116.9 120.0
O5 C13 C14 H29 63.1 65.5
C13 C14 C4 O1 301.5 353.6
C4 C14 C13 C15 121.1 120.0
C4 C14 C13 H29 239.9 240.0
C12 C13 C14 O5 234.7 240.0
C12 C13 C14 H28 116.9 120.0
C14 C13 O5 HO5 165.4 300.0
O5 C13 C14 H28 242.2 239.9
C13 C14 C15 C1 188.4 82.8
C13 C14 C15 H151 308.5 202.9
C13 C14 C15 H152 70.6 322.9
C15 C14 C13 H29 118.9 120.0
HO5 O5 C13 C14 165.4 300.0
HO5 O5 C13 H28 48.5 180.0
C2 C1 C15 C14 56.0 292.0
C15 C14 C4 O1 63.1 113.6
C4 C14 C15 C13 239.5 240.0
C4 C14 C15 H29 120.0 120.0
C15 C14 C13 H28 299.8 305.6
C13 C14 C15 H29 240.5 240.0
C1 C15 C14 H151 240.0 240.0
C1 C15 C14 H152 117.8 120.0
C14 C15 C1 C3 177.9 172.0
C14 C15 C1 H1 297.5 52.0
H151 C15 C14 H152 237.8 240.0
C15 C1 C2 H21 73.5 79.2
C15 C1 C2 H22 193.4 199.3
C15 C1 C2 H23 313.4 319.3
C2 C1 C15 C3 238.1 120.0
C2 C1 C15 H1 118.6 240.0
C14 C15 C1 H151 120.0 120.0
C14 C15 C1 H152 242.1 240.0
C1 C15 C14 H29 307.9 202.9
H151 C15 C1 H152 122.1 120.0
C3 C1 C15 H1 240.5 120.0
C15 C1 C3 H31 183.7 180.0
C15 C1 C3 H32 303.7 300.0
C15 C1 C3 H33 63.7 60.0
C14 C15 H151 C1 236.0 240.0
C14 C15 H151 H152 118.0 120.0
H151 C15 C14 H29 68.0 322.9
C1 C15 H151 H152 242.0 240.0
H151 C15 C1 C3 57.9 52.0
H151 C15 C1 H1 177.5 292.0
C14 C15 H152 C1 122.7 120.0
C14 C15 H152 H151 241.4 240.0
H152 C15 C14 H29 190.1 82.9
C1 C15 H152 H151 118.7 120.0
H152 C15 C1 C3 295.8 292.0
H152 C15 C1 H1 55.3 172.0
C3 C1 C2 H21 311.3 199.2
C3 C1 C2 H22 71.3 319.3
C3 C1 C2 H23 191.3 79.3
C2 C1 C3 C15 123.0 239.9
C2 C1 C3 H1 241.3 120.0
C3 C1 C15 H151 57.9 52.0
C3 C1 C15 H152 295.8 292.0
C15 C1 C3 H1 118.3 240.0
H31 C3 C1 H32 240.0 240.0
H31 C3 C1 H33 119.9 120.0
H32 C3 C1 H33 240.0 240.0
H1 C1 C2 H21 191.7 319.2
H1 C1 C2 H22 311.7 79.3
H1 C1 C2 H23 71.7 199.3
C2 C1 H1 C15 239.3 120.0
C2 C1 H1 C3 119.5 240.0
H1 C1 C15 H151 177.5 292.0
H1 C1 C15 H152 55.3 172.0
C15 C1 H1 C3 240.2 120.0
H1 C1 C3 H31 65.4 300.0
H1 C1 C3 H32 185.4 60.0
H1 C1 C3 H33 305.4 180.0
H31 C3 C1 H1 65.4 300.0
C1 C3 H31 H32 120.0 120.0
C1 C3 H31 H33 240.0 240.0
H32 C3 H31 H33 120.0 120.0
H32 C3 C1 H1 185.4 60.0
C1 C3 H32 H31 240.0 240.1
C1 C3 H32 H33 120.0 120.0
H31 C3 H32 H33 240.0 240.0
H33 C3 C1 H1 305.4 180.0
C1 C3 H33 H31 120.0 120.0
C1 C3 H33 H32 240.0 240.0
H31 C3 H33 H32 120.0 120.0
C6 C7 H71 H72 120.0 120.1
C6 C7 H71 H73 240.0 240.0
H72 C7 H71 H73 120.0 119.9
C6 C7 H72 H71 240.0 239.9
C6 C7 H72 H73 120.0 120.0
H71 C7 H72 H73 240.0 240.1
C6 C7 H73 H71 120.0 120.0
C6 C7 H73 H72 240.1 239.9
H71 C7 H73 H72 120.0 119.9
C10 N2 HN2 C11 180.0 180.0
HN2 N2 C11 H111 128.5 119.9
HN2 N2 C11 H112 248.4 240.0
HN2 N2 C11 H113 8.5 360.0
C12 C13 H28 O5 119.7 120.0
C12 C13 H28 C14 239.5 240.1
O5 C13 H28 C14 119.8 120.1
H28 C13 O5 HO5 48.5 180.0
H28 C13 C14 C15 299.8 305.6
H28 C13 C14 H29 180.9 185.6
H29 C14 C4 O1 181.9 233.6
C4 C14 H29 C13 119.4 120.0
C4 C14 H29 C15 240.0 240.0
C13 C14 H29 C15 120.6 120.0
H29 C14 C13 H28 180.9 185.6
H29 C14 C15 C1 307.9 202.9
H29 C14 C15 H151 68.0 322.9
H29 C14 C15 H152 190.1 82.9