PDB Chemical Component 083

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 083

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N2 C7 1.356 1.373
C7 C6 1.499 1.481
C7 N3 1.258 1.313
C6 N1 1.357 1.326
C6 N6 1.356 1.326
N1 C4 1.350 1.321
C4 C5 1.499 1.508
C4 C3 1.396 1.388
C3 C2 1.390 1.388
N6 C2 1.353 1.322
C2 C1 1.511 1.507
N3 C8 1.393 1.360
C8 C21 1.393 1.462
C8 N4 1.365 1.325
C21 C20 1.406 1.398
C21 C16 1.401 1.417
C20 C19 1.390 1.365
C19 C18 1.398 1.392
C18 C17 1.402 1.363
C17 C16 1.399 1.403
C16 C15 1.404 1.407
C15 C9 1.405 1.382
C9 N4 1.361 1.332
C9 C10 1.400 1.483
C10 N5 1.363 1.327
C10 C11 1.403 1.394
N5 C14 1.360 1.317
C14 C13 1.395 1.383
C13 C12 1.394 1.387
C12 C11 1.396 1.384
N2 H21N 1.000 0.970
N2 H22N 1.000 0.970
C5 H51C 1.100 1.091
C5 H52C 1.100 1.090
C5 H53C 1.100 1.090
C3 H3 1.080 1.080
C1 H11C 1.100 1.090
C1 H12C 1.100 1.089
C1 H13C 1.100 1.090
C20 H20 1.080 1.080
C19 H19 1.080 1.080
C18 H18 1.080 1.080
C17 H17 1.080 1.080
C15 H15 1.079 1.079
C11 H11 1.080 1.080
C14 H14 1.080 1.080
C13 H13 1.080 1.081
C12 H12 1.080 1.080

Bond Angles for 083

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N2 C7 C6 121.5 120.0
N2 C7 N3 122.2 120.0
C7 N2 H21N 120.0 120.0
C7 N2 H22N 120.0 120.0
C6 C7 N3 116.3 120.0
C7 C6 N1 118.7 119.2
C7 C6 N6 120.1 119.2
C7 N3 C8 125.6 120.1
N1 C6 N6 121.2 121.6
C6 N1 C4 119.5 120.7
C6 N6 C2 121.0 120.7
N1 C4 C5 119.9 120.4
N1 C4 C3 120.2 119.2
C5 C4 C3 120.0 120.4
C4 C5 H51C 109.5 109.4
C4 C5 H52C 109.5 109.5
C4 C5 H53C 109.5 109.4
C4 C3 C2 119.4 118.5
C4 C3 H3 120.3 120.8
C3 C2 N6 118.6 119.2
C3 C2 C1 120.9 120.5
C2 C3 H3 120.3 120.7
N6 C2 C1 120.4 120.4
C2 C1 H11C 109.5 109.4
C2 C1 H12C 109.5 109.5
C2 C1 H13C 109.5 109.5
N3 C8 C21 117.4 120.4
N3 C8 N4 122.1 120.3
C21 C8 N4 120.5 119.3
C8 C21 C20 120.4 122.1
C8 C21 C16 118.6 118.4
C8 N4 C9 122.4 122.4
C20 C21 C16 121.0 119.5
C21 C20 C19 120.0 119.5
C21 C20 H20 120.0 120.2
C21 C16 C17 118.9 119.5
C21 C16 C15 119.9 118.3
C20 C19 C18 119.3 121.0
C19 C20 H20 120.0 120.3
C20 C19 H19 120.4 119.5
C19 C18 C17 121.0 121.0
C18 C19 H19 120.3 119.5
C19 C18 H18 119.5 119.5
C18 C17 C16 120.0 119.4
C17 C18 H18 119.5 119.5
C18 C17 H17 120.0 120.3
C17 C16 C15 121.3 122.1
C16 C17 H17 120.0 120.3
C16 C15 C9 119.9 119.3
C16 C15 H15 120.0 120.3
C15 C9 N4 118.6 122.4
C15 C9 C10 122.1 118.8
C9 C15 H15 120.1 120.4
N4 C9 C10 119.3 118.8
C9 C10 N5 120.6 119.7
C9 C10 C11 120.6 119.7
N5 C10 C11 118.8 120.5
C10 N5 C14 122.0 121.6
C10 C11 C12 120.1 119.1
C10 C11 H11 119.9 120.4
N5 C14 C13 120.4 120.9
N5 C14 H14 119.8 119.5
C14 C13 C12 119.1 119.4
C13 C14 H14 119.8 119.6
C14 C13 H13 120.5 120.3
C13 C12 C11 119.6 118.5
C12 C13 H13 120.5 120.3
C13 C12 H12 120.1 120.7
C12 C11 H11 120.0 120.5
C11 C12 H12 120.2 120.8
H21N N2 H22N 120.0 120.0
H51C C5 H52C 109.5 109.5
H51C C5 H53C 109.5 109.5
H52C C5 H53C 109.5 109.5
H11C C1 H12C 109.4 109.5
H11C C1 H13C 109.5 109.4
H12C C1 H13C 109.5 109.5

Torsion Angles for 083

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C7 N2 N3 179.7 180.0
N2 C7 C6 N1 180.3 0.1
N2 C7 C6 N6 360.0 179.7
N2 C7 N3 C8 359.6 5.3
H21N N2 C7 H22N 180.0 180.2
N2 C7 C6 N3 180.3 180.0
C6 C7 N2 H21N 179.7 354.7
C6 C7 N2 H22N 359.7 174.5
C6 C7 N3 C8 179.9 185.4
N1 C6 C7 N6 180.3 180.4
C7 C6 N1 C4 180.1 180.0
C7 C6 N6 C2 180.0 179.7
N2 C7 N3 C6 179.7 180.0
N3 C7 N2 H21N 0.0 174.8
N3 C7 N2 H22N 180.0 354.5
N3 C7 C6 N1 0.1 180.0
N3 C7 C6 N6 179.7 359.6
C7 N3 C8 C21 180.3 95.2
C7 N3 C8 N4 0.3 275.0
N1 C6 C7 N3 0.1 180.0
C7 C6 N1 N6 179.6 179.6
N1 C6 N6 C2 359.7 359.3
C6 N1 C4 C5 179.8 179.9
C6 N1 C4 C3 359.7 360.0
N6 C6 C7 N3 179.7 359.6
C7 C6 N6 N1 180.4 180.4
N6 C6 N1 C4 0.4 0.4
C3 C2 N6 C6 0.1 0.6
C6 N6 C2 C1 180.1 180.3
C4 N1 C6 N6 0.4 0.4
C5 C4 N1 C3 180.1 180.0
N1 C4 C5 H51C 0.0 90.0
N1 C4 C5 H52C 120.0 210.0
N1 C4 C5 H53C 240.0 330.0
N1 C4 C3 C2 0.1 360.0
N1 C4 C3 H3 180.1 180.0
N1 C4 C5 C3 179.9 180.0
C5 C4 C3 C2 180.0 180.0
C5 C4 C3 H3 360.0 0.0
H51C C5 C4 H52C 240.0 240.0
H51C C5 C4 H53C 120.0 120.0
H52C C5 C4 H53C 240.0 239.9
N1 C4 C3 C5 180.1 180.0
C3 C4 C5 H51C 180.1 270.0
C3 C4 C5 H52C 300.1 30.0
C3 C4 C5 H53C 60.1 150.0
C4 C3 C2 N6 0.1 359.8
C4 C3 C2 C1 180.1 180.0
C2 C3 C4 H3 180.0 179.9
C6 N6 C2 C3 0.1 0.6
C4 C3 C2 H3 180.0 180.1
N6 C2 C3 C1 180.0 179.8
C3 C2 C1 H11C 180.0 90.0
C3 C2 C1 H12C 300.0 210.0
C3 C2 C1 H13C 60.0 330.1
C3 C2 N6 C1 180.0 180.2
N6 C2 C3 H3 180.0 179.7
N6 C2 C1 H11C 0.0 270.2
N6 C2 C1 H12C 120.0 30.2
N6 C2 C1 H13C 240.0 150.3
C3 C2 C1 N6 180.0 179.8
C1 C2 C3 H3 0.0 359.9
H11C C1 C2 H12C 240.0 239.9
H11C C1 C2 H13C 120.0 119.9
H12C C1 C2 H13C 240.0 239.9
C21 C8 N3 N4 180.0 180.2
N3 C8 C21 C20 359.7 0.1
N3 C8 C21 C16 180.3 180.0
N3 C8 N4 C9 179.9 179.7
N3 C8 C21 N4 180.0 179.8
C21 C8 N4 C9 359.8 359.6
C20 C21 C8 C16 179.4 180.1
C8 C21 C20 C19 180.2 180.0
C8 C21 C20 H20 0.3 359.9
C8 C21 C16 C17 179.9 180.0
C8 C21 C16 C15 359.7 0.0
N3 C8 N4 C21 180.0 180.2
N4 C8 C21 C20 179.7 180.3
N4 C8 C21 C16 0.3 0.2
C15 C9 N4 C8 360.0 0.5
C8 N4 C9 C10 180.2 180.2
C20 C21 C8 N4 179.7 180.3
C8 C21 C20 C16 180.6 179.9
C20 C21 C16 C17 0.4 359.9
C20 C21 C16 C15 180.3 179.9
C21 C20 C19 C18 359.9 359.9
C19 C20 C21 H20 180.0 180.1
C21 C20 C19 H19 179.9 180.0
C16 C21 C8 N4 0.3 0.2
C8 C21 C16 C20 179.4 180.1
C16 C21 C20 C19 359.6 0.1
C16 C21 C20 H20 179.7 180.0
C18 C17 C16 C21 359.9 0.1
C17 C16 C21 C15 180.2 180.0
C21 C16 C17 H17 179.9 180.0
C21 C16 C15 C9 0.1 0.0
C21 C16 C15 H15 180.1 179.9
C19 C20 C21 C16 359.6 0.1
C21 C20 C19 H20 180.0 179.9
C20 C19 C18 C17 0.4 0.1
C18 C19 C20 H19 180.0 180.0
C20 C19 C18 H18 180.5 180.0
C18 C19 C20 H20 179.9 180.0
C20 C19 C18 H19 180.0 180.0
C19 C18 C17 C16 359.6 359.9
C17 C18 C19 H18 180.0 180.1
C19 C18 C17 H17 179.6 180.0
C21 C16 C17 C18 359.9 0.1
C17 C18 C19 H19 180.5 180.0
C19 C18 C17 H18 180.0 179.9
C18 C17 C16 C15 180.1 180.1
C16 C17 C18 H17 180.0 179.9
C21 C16 C17 C15 179.8 180.0
C16 C17 C18 H18 179.6 180.0
C18 C17 C16 H17 180.0 180.1
C17 C16 C15 C9 180.0 180.1
C17 C16 C15 H15 360.0 359.9
C21 C16 C15 C17 180.2 180.0
C15 C16 C17 H17 0.1 359.9
C16 C15 C9 N4 0.0 359.7
C16 C15 C9 C10 179.8 180.0
C9 C15 C16 H15 180.0 180.1
C8 N4 C9 C15 360.0 0.5
C16 C15 C9 H15 180.0 179.9
N4 C9 C15 C10 180.2 179.7
C15 C9 C10 N5 0.1 359.9
C15 C9 C10 C11 180.2 179.7
C15 C9 N4 C10 179.8 180.3
N4 C9 C15 H15 180.0 179.8
N4 C9 C10 N5 179.9 180.2
N4 C9 C10 C11 360.0 359.9
C15 C9 C10 N4 180.2 179.7
C10 C9 C15 H15 359.8 0.1
N5 C10 C9 C11 179.9 180.3
C9 C10 N5 C14 179.8 180.0
C9 C10 C11 C12 180.2 179.8
C9 C10 C11 H11 0.1 0.0
C9 C10 N5 C11 180.1 179.7
N5 C10 C11 C12 0.2 359.5
N5 C10 C11 H11 180.2 179.8
C10 N5 C14 C13 0.1 360.0
C10 N5 C14 H14 180.1 180.0
C9 C10 C11 N5 179.9 180.3
C11 C10 N5 C14 359.7 0.3
C13 C12 C11 C10 359.9 0.5
C12 C11 C10 H11 180.0 179.7
C10 C11 C12 H12 179.9 180.3
C14 N5 C10 C11 359.7 0.3
N5 C14 C13 C12 0.1 0.1
C13 C14 N5 H14 180.0 180.0
N5 C14 C13 H13 180.1 179.9
N5 C14 C13 H14 180.0 180.0
C14 C13 C12 C11 359.9 359.7
C12 C13 C14 H13 180.0 180.1
C14 C13 C12 H12 179.9 179.9
C10 C11 C12 C13 359.9 0.5
C12 C13 C14 H14 180.0 180.0
C14 C13 C12 H13 180.0 179.9
C13 C12 C11 H11 179.9 180.2
C11 C12 C13 H12 180.0 179.8
C10 C11 C12 H11 180.0 180.3
C11 C12 C13 H13 179.9 179.8
C13 C12 C11 H12 180.0 180.2
H21N N2 C7 C6 179.7 354.7
H21N N2 C7 N3 0.0 174.8
C7 N2 H21N H22N 180.0 179.8
H22N N2 C7 C6 359.7 174.5
H22N N2 C7 N3 180.0 354.5
C7 N2 H22N H21N 180.0 180.2
H51C C5 C4 C3 180.1 270.0
C4 C5 H51C H52C 120.0 120.0
C4 C5 H51C H53C 240.0 240.1
H52C C5 H51C H53C 120.0 120.1
H52C C5 C4 C3 300.1 30.0
C4 C5 H52C H51C 240.0 240.1
C4 C5 H52C H53C 120.0 120.0
H51C C5 H52C H53C 240.0 239.9
H53C C5 C4 C3 60.1 150.0
C4 C5 H53C H51C 120.0 119.9
C4 C5 H53C H52C 240.0 240.0
H51C C5 H53C H52C 120.0 120.1
C4 C3 H3 C2 180.0 179.9
H3 C3 C2 N6 180.0 179.7
H3 C3 C2 C1 0.0 359.9
C2 C1 H11C H12C 120.0 120.0
C2 C1 H11C H13C 240.0 240.1
H12C C1 H11C H13C 120.0 120.0
C2 C1 H12C H11C 240.0 240.0
C2 C1 H12C H13C 120.0 120.0
H11C C1 H12C H13C 240.0 240.0
C2 C1 H13C H11C 120.0 119.9
C2 C1 H13C H12C 240.0 240.0
H11C C1 H13C H12C 119.9 120.0
H20 C20 C21 C16 179.7 180.0
C21 C20 H20 C19 180.0 180.1
H20 C20 C19 C18 179.9 180.0
H20 C20 C19 H19 359.9 0.0
C20 C19 H19 C18 180.0 180.0
H19 C19 C20 H20 359.9 0.0
H19 C19 C18 C17 180.5 180.0
H19 C19 C18 H18 0.5 360.0
C19 C18 H18 C17 180.0 180.1
H18 C18 C19 H19 0.5 360.0
H18 C18 C17 C16 179.6 180.0
H18 C18 C17 H17 359.6 0.1
C18 C17 H17 C16 180.0 179.9
H17 C17 C18 H18 359.6 0.1
H17 C17 C16 C15 0.1 359.9
C16 C15 H15 C9 180.0 180.1
H15 C15 C9 N4 180.0 179.8
H15 C15 C9 C10 359.8 0.1
C10 C11 H11 C12 180.0 179.7
H11 C11 C12 H12 359.9 0.1
N5 C14 H14 C13 180.0 180.0
H14 C14 C13 C12 180.0 180.0
H14 C14 C13 H13 0.1 359.9
C14 C13 H13 C12 180.0 180.1
H13 C13 C14 H14 0.1 359.9
H13 C13 C12 C11 179.9 179.8
H13 C13 C12 H12 359.9 360.0
C13 C12 H12 C11 180.0 179.8
H12 C12 C13 H13 359.9 360.0
H12 C12 C11 H11 359.9 0.1