PDB Chemical Component 07Z
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 07Z
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N2 |
C1 |
1.370 |
1.392 |
| C1 |
C17 |
1.434 |
1.392 |
| C1 |
C21 |
1.447 |
1.392 |
| C3 |
N2 |
1.372 |
1.377 |
| N2 |
HN2 |
1.000 |
0.970 |
| N4 |
C3 |
1.334 |
1.302 |
| C3 |
S7 |
1.740 |
1.709 |
| C5 |
N4 |
1.328 |
1.312 |
| N8 |
C5 |
1.283 |
1.385 |
| C5 |
C6 |
1.391 |
1.383 |
| C9 |
C6 |
1.493 |
1.407 |
| C6 |
S7 |
1.715 |
1.762 |
| N8 |
HN8 |
1.000 |
0.970 |
| N8 |
HN8A |
1.000 |
0.971 |
| O16 |
C9 |
1.351 |
1.219 |
| C9 |
C10 |
1.493 |
1.480 |
| C10 |
C15 |
1.420 |
1.395 |
| C10 |
C11 |
1.446 |
1.401 |
| C11 |
C12 |
1.424 |
1.384 |
| C11 |
H11 |
1.080 |
1.080 |
| C12 |
C13 |
1.410 |
1.384 |
| C12 |
H12 |
1.080 |
1.079 |
| N14 |
C13 |
1.382 |
1.319 |
| C13 |
H13 |
1.080 |
1.080 |
| C15 |
N14 |
1.390 |
1.317 |
| C15 |
H15 |
1.080 |
1.080 |
| C17 |
C18 |
1.410 |
1.376 |
| C17 |
H17 |
1.080 |
1.080 |
| C18 |
C19 |
1.434 |
1.398 |
| C18 |
H18 |
1.080 |
1.081 |
| C20 |
C19 |
1.435 |
1.398 |
| C19 |
C22 |
1.490 |
1.474 |
| C21 |
C20 |
1.417 |
1.377 |
| C20 |
H20 |
1.080 |
1.080 |
| C21 |
H21 |
1.080 |
1.080 |
| C22 |
O23 |
1.358 |
1.215 |
| C22 |
O24 |
1.411 |
1.348 |
| O24 |
HO24 |
0.950 |
0.967 |
Bond Angles for 07Z
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N2 |
C1 |
C17 |
117.5 |
119.9 |
| N2 |
C1 |
C21 |
124.2 |
119.9 |
| C17 |
C1 |
C21 |
118.3 |
120.1 |
| C1 |
C17 |
C18 |
120.9 |
120.1 |
| C1 |
C17 |
H17 |
119.5 |
119.9 |
| C1 |
C21 |
C20 |
120.7 |
120.1 |
| C1 |
C21 |
H21 |
119.6 |
120.0 |
| C3 |
N2 |
HN2 |
115.3 |
120.0 |
| N4 |
C3 |
S7 |
114.7 |
110.8 |
| C3 |
S7 |
C6 |
87.5 |
90.6 |
| C5 |
C6 |
S7 |
112.0 |
107.6 |
| HN8 |
N8 |
HN8A |
109.5 |
119.9 |
| C9 |
C10 |
C15 |
121.0 |
120.6 |
| C9 |
C10 |
C11 |
121.2 |
120.5 |
| C11 |
C10 |
C15 |
117.8 |
118.9 |
| C10 |
C15 |
N14 |
119.5 |
120.6 |
| C10 |
C15 |
H15 |
120.2 |
119.7 |
| C10 |
C11 |
C12 |
121.1 |
118.3 |
| C10 |
C11 |
H11 |
119.5 |
120.8 |
| C12 |
C11 |
H11 |
119.4 |
120.9 |
| C11 |
C12 |
C13 |
118.8 |
119.3 |
| C11 |
C12 |
H12 |
120.6 |
120.3 |
| C13 |
C12 |
H12 |
120.6 |
120.4 |
| C12 |
C13 |
H13 |
120.1 |
119.4 |
| N14 |
C13 |
H13 |
120.2 |
119.5 |
| C18 |
C17 |
H17 |
119.6 |
120.0 |
| C17 |
C18 |
C19 |
120.8 |
119.9 |
| C17 |
C18 |
H18 |
119.6 |
120.0 |
| C19 |
C18 |
H18 |
119.6 |
120.1 |
| C18 |
C19 |
C22 |
119.4 |
120.1 |
| C20 |
C19 |
C22 |
121.7 |
120.1 |
| C19 |
C22 |
O23 |
118.8 |
120.0 |
| C19 |
C22 |
O24 |
122.1 |
120.0 |
| C21 |
C20 |
H20 |
119.8 |
120.0 |
| O23 |
C22 |
O24 |
119.1 |
120.0 |
| C22 |
O24 |
HO24 |
109.5 |
117.0 |
Torsion Angles for 07Z
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C17 |
C1 |
N2 |
C21 |
181.3 |
180.2 |
| N2 |
C1 |
C17 |
C18 |
178.8 |
179.7 |
| N2 |
C1 |
C17 |
H17 |
358.8 |
359.8 |
| N2 |
C1 |
C21 |
C20 |
181.2 |
180.3 |
| N2 |
C1 |
C21 |
H21 |
1.2 |
0.2 |
| N2 |
C1 |
C17 |
C21 |
178.8 |
179.8 |
| C17 |
C1 |
C21 |
C20 |
359.9 |
0.1 |
| C17 |
C1 |
C21 |
H21 |
179.9 |
180.0 |
| C18 |
C17 |
C1 |
H17 |
180.0 |
179.9 |
| C1 |
C17 |
C18 |
C19 |
360.0 |
0.1 |
| C1 |
C17 |
C18 |
H18 |
180.0 |
180.0 |
| N2 |
C1 |
C21 |
C17 |
181.3 |
180.2 |
| C21 |
C1 |
C17 |
C18 |
360.0 |
359.9 |
| C21 |
C1 |
C17 |
H17 |
180.0 |
180.0 |
| C1 |
C21 |
C20 |
H20 |
180.2 |
180.0 |
| C3 |
N2 |
C1 |
C17 |
161.2 |
332.3 |
| C3 |
N2 |
C1 |
C21 |
339.9 |
152.1 |
| HN2 |
N2 |
C1 |
C17 |
341.1 |
152.4 |
| HN2 |
N2 |
C1 |
C21 |
159.9 |
332.2 |
| N4 |
C3 |
N2 |
HN2 |
358.2 |
174.0 |
| N4 |
C3 |
S7 |
C6 |
359.2 |
359.6 |
| S7 |
C3 |
N2 |
HN2 |
178.9 |
353.6 |
| C5 |
C6 |
S7 |
C3 |
0.8 |
0.4 |
| C5 |
N4 |
C3 |
S7 |
0.5 |
0.3 |
| C3 |
S7 |
C6 |
C5 |
0.8 |
0.4 |
| C11 |
C10 |
C9 |
C15 |
181.1 |
180.3 |
| C9 |
C10 |
C15 |
N14 |
180.8 |
179.7 |
| C9 |
C10 |
C15 |
H15 |
0.7 |
359.9 |
| C9 |
C10 |
C11 |
C12 |
179.3 |
180.0 |
| C9 |
C10 |
C11 |
H11 |
359.3 |
360.0 |
| C9 |
C10 |
C15 |
C11 |
181.1 |
180.3 |
| C15 |
C10 |
C11 |
C12 |
0.4 |
0.3 |
| C15 |
C10 |
C11 |
H11 |
180.4 |
180.2 |
| C9 |
C10 |
C11 |
C15 |
178.9 |
179.7 |
| C11 |
C10 |
C15 |
N14 |
359.7 |
359.4 |
| C11 |
C10 |
C15 |
H15 |
179.6 |
179.7 |
| C12 |
C11 |
C10 |
H11 |
180.0 |
180.0 |
| C10 |
C11 |
C12 |
C13 |
359.8 |
0.0 |
| C10 |
C11 |
C12 |
H12 |
179.8 |
180.0 |
| C12 |
C11 |
C10 |
C15 |
0.4 |
0.3 |
| C10 |
C11 |
C12 |
H11 |
180.0 |
180.0 |
| C13 |
C12 |
C11 |
H12 |
180.0 |
180.1 |
| C11 |
C12 |
C13 |
H13 |
179.9 |
180.0 |
| H11 |
C11 |
C10 |
C15 |
180.4 |
180.2 |
| C10 |
C11 |
H11 |
C12 |
180.0 |
180.0 |
| H11 |
C11 |
C12 |
C13 |
179.8 |
180.0 |
| H11 |
C11 |
C12 |
H12 |
359.8 |
360.0 |
| C13 |
C12 |
C11 |
H11 |
179.8 |
180.0 |
| C11 |
C12 |
C13 |
H12 |
180.0 |
179.9 |
| N14 |
C13 |
C12 |
H13 |
180.0 |
180.0 |
| H12 |
C12 |
C11 |
H11 |
359.8 |
360.0 |
| C11 |
C12 |
H12 |
C13 |
180.0 |
180.1 |
| H12 |
C12 |
C13 |
H13 |
359.9 |
0.1 |
| C10 |
C15 |
N14 |
C13 |
0.0 |
0.6 |
| N14 |
C13 |
C12 |
H12 |
179.9 |
180.0 |
| C12 |
C13 |
N14 |
H13 |
180.0 |
180.0 |
| H13 |
C13 |
C12 |
H12 |
359.9 |
0.1 |
| C10 |
C15 |
N14 |
H15 |
180.0 |
180.3 |
| C15 |
N14 |
C13 |
H13 |
180.2 |
179.7 |
| C10 |
C15 |
H15 |
N14 |
180.0 |
179.8 |
| C18 |
C17 |
C1 |
C21 |
360.0 |
359.9 |
| C1 |
C17 |
C18 |
H17 |
180.0 |
180.1 |
| C19 |
C18 |
C17 |
H18 |
180.0 |
180.1 |
| C17 |
C18 |
C19 |
C22 |
180.3 |
179.9 |
| H17 |
C17 |
C1 |
C21 |
180.0 |
180.0 |
| C1 |
C17 |
H17 |
C18 |
180.0 |
179.9 |
| H17 |
C17 |
C18 |
C19 |
179.9 |
180.0 |
| H17 |
C17 |
C18 |
H18 |
360.0 |
359.8 |
| C19 |
C18 |
C17 |
H17 |
179.9 |
180.0 |
| C17 |
C18 |
C19 |
H18 |
180.0 |
179.9 |
| C20 |
C19 |
C18 |
C22 |
179.9 |
180.0 |
| C18 |
C19 |
C22 |
O23 |
0.3 |
360.0 |
| C18 |
C19 |
C22 |
O24 |
180.1 |
179.9 |
| H18 |
C18 |
C17 |
H17 |
360.0 |
359.8 |
| C17 |
C18 |
H18 |
C19 |
180.0 |
180.1 |
| H18 |
C18 |
C19 |
C22 |
0.3 |
0.1 |
| C1 |
C21 |
C20 |
C19 |
0.2 |
359.9 |
| C20 |
C19 |
C18 |
H18 |
180.2 |
180.0 |
| C18 |
C19 |
C20 |
C22 |
180.1 |
180.0 |
| C20 |
C19 |
C22 |
O23 |
180.4 |
180.0 |
| C20 |
C19 |
C22 |
O24 |
0.2 |
360.0 |
| C22 |
C19 |
C18 |
H18 |
0.3 |
0.1 |
| O23 |
C22 |
C19 |
O24 |
180.2 |
180.0 |
| C19 |
C22 |
O24 |
HO24 |
180.2 |
180.0 |
| C1 |
C21 |
C20 |
H21 |
180.0 |
180.0 |
| C21 |
C20 |
C19 |
C22 |
179.6 |
180.0 |
| H20 |
C20 |
C19 |
C22 |
359.7 |
360.0 |
| C1 |
C21 |
H21 |
C20 |
180.0 |
180.0 |
| H21 |
C21 |
C20 |
H20 |
0.2 |
0.0 |
| C19 |
C22 |
O23 |
O24 |
179.8 |
180.0 |
| O23 |
C22 |
O24 |
HO24 |
0.0 |
360.0 |
| C19 |
C22 |
O24 |
O23 |
180.2 |
180.0 |