PDB Chemical Component 07J

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 07J

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C13 O12 1.426 1.429
O12 C11 1.394 1.359
C11 C10 1.383 1.387
C11 C14 1.379 1.387
CL2 C14 1.716 1.736
C10 C7 1.383 1.387
C14 C4 1.379 1.389
C9 O8 1.422 1.429
C7 O8 1.390 1.360
C7 C5 1.381 1.387
O1 C2 1.226 1.216
C4 C5 1.380 1.388
C4 N3 1.405 1.401
C5 CL1 1.725 1.736
C2 N3 1.382 1.348
C2 N16 1.394 1.348
C17 N16 1.449 1.464
N16 C18 1.422 1.391
C18 C19 1.382 1.390
C18 N23 1.340 1.331
C26 C27 1.381 1.381
C26 C25 1.381 1.388
C19 C20 1.381 1.392
N23 C22 1.337 1.317
C27 C28 1.386 1.388
C38 C37 1.518 1.531
C38 N31 1.465 1.469
C37 N34 1.494 1.469
C20 N24 1.408 1.387
C20 N21 1.339 1.332
C22 N21 1.338 1.317
N24 C25 1.407 1.400
C25 C30 1.381 1.389
N34 C35 1.484 1.469
N34 C33 1.490 1.470
C35 C36 1.512 1.529
C28 N31 1.415 1.400
C28 C29 1.381 1.389
N31 C32 1.464 1.469
C32 C33 1.516 1.530
C30 C29 1.379 1.381
N3 H1 1.000 0.970
C9 H2 1.100 1.090
C9 H3 1.099 1.091
C9 H4 1.100 1.090
C10 H5 1.080 1.080
C13 H6 1.100 1.090
C13 H7 1.101 1.089
C13 H8 1.100 1.090
C17 H9 1.100 1.089
C17 H10 1.100 1.090
C17 H11 1.100 1.090
C19 H12 1.080 1.080
C22 H13 1.080 1.080
N24 H14 1.000 0.970
C26 H15 1.079 1.081
C27 H16 1.080 1.080
C29 H17 1.080 1.080
C30 H18 1.080 1.079
C32 H19 1.100 1.090
C32 H20 1.100 1.090
C33 H21 1.100 1.090
C33 H22 1.100 1.090
C35 H24 1.100 1.090
C35 H25 1.100 1.089
C36 H26 1.099 1.090
C36 H27 1.099 1.090
C36 H28 1.101 1.090
C37 H29 1.101 1.090
C37 H30 1.100 1.090
C38 H31 1.100 1.090
C38 H32 1.100 1.090

Bond Angles for 07J

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O12 C11 C14 117.0 120.0
C11 C10 H5 120.0 120.0
O1 C2 N3 121.6 120.0
O1 C2 N16 122.9 120.0
C4 C5 CL1 121.0 120.0
C4 N3 H1 119.8 120.0
N3 C2 N16 115.5 120.0
C2 N3 H1 119.8 120.0
C2 N16 C18 124.4 119.9
C17 N16 C18 117.4 120.0
N16 C18 C19 118.4 120.5
N16 C18 N23 120.5 120.5
C19 C18 N23 121.1 119.0
C18 C19 C20 119.0 118.3
C18 C19 H12 120.5 120.9
C18 N23 C22 115.6 120.9
C26 C27 C28 120.9 119.9
C27 C26 H15 119.7 120.0
C26 C27 H16 119.6 120.0
C26 C25 C30 118.7 120.0
C19 C20 N24 122.1 120.5
C19 C20 N21 120.8 119.0
C20 C19 H12 120.5 120.9
N23 C22 H13 116.2 119.0
C27 C28 N31 123.3 120.0
C27 C28 C29 118.2 120.0
C28 C27 H16 119.6 120.0
C38 C37 H29 110.2 109.5
C38 C37 H30 110.2 109.5
N21 C20 N24 117.1 120.4
C20 N24 C25 128.8 120.0
C20 N24 H14 115.6 120.0
N24 C25 C30 118.9 120.0
C25 N24 H14 115.6 120.0
C25 C30 C29 120.7 120.0
C25 C30 H18 119.7 120.0
N34 C35 C36 107.5 109.5
N34 C35 H24 110.1 109.4
N34 C35 H25 110.1 109.5
N34 C33 H21 110.5 109.5
N34 C33 H22 110.5 109.5
C36 C35 H24 110.1 109.5
C36 C35 H25 110.1 109.5
C35 C36 H26 109.5 109.5
C35 C36 H27 109.4 109.5
C35 C36 H28 109.5 109.5
C29 C28 N31 118.5 119.9
C28 N31 C32 111.3 111.0
C28 C29 H17 119.5 120.1
N31 C32 C33 109.1 109.3
N31 C32 H19 109.6 109.5
N31 C32 H20 109.6 109.5
C33 C32 H19 109.6 109.5
C33 C32 H20 109.6 109.5
C32 C33 H21 110.5 109.5
C32 C33 H22 110.5 109.5
C30 C29 H17 119.5 119.9
H2 C9 H3 109.4 109.5
H2 C9 H4 109.5 109.5
H3 C9 H4 109.4 109.5
H6 C13 H7 109.5 109.4
H6 C13 H8 109.4 109.5
H7 C13 H8 109.5 109.5
H9 C17 H10 109.5 109.5
H9 C17 H11 109.5 109.5
H10 C17 H11 109.5 109.4
H19 C32 H20 109.3 109.5
H21 C33 H22 108.4 109.5
H24 C35 H25 108.8 109.4
H26 C36 H27 109.5 109.5
H26 C36 H28 109.4 109.4
H27 C36 H28 109.5 109.4
H29 C37 H30 108.7 109.5
H31 C38 H32 109.7 109.5

Torsion Angles for 07J

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C13 O12 C11 C14 184.6 180.3
O12 C11 C10 H5 359.8 0.0
C14 C11 C10 H5 178.5 179.8
C14 C4 N3 H1 280.3 137.3
N3 C2 O1 N16 179.1 180.2
O1 C2 N3 H1 182.3 177.2
O1 C2 N16 C18 182.3 4.8
C5 C4 N3 H1 101.3 317.6
C4 N3 C2 N16 181.4 177.4
C2 N3 C4 H1 180.0 179.9
O1 C2 N3 N16 180.8 179.8
C4 N3 C2 H1 180.0 180.1
N3 C2 N16 C18 3.1 184.6
O1 C2 N16 N3 179.2 180.2
N16 C2 N3 H1 1.4 357.4
C17 N16 C2 C18 177.4 180.1
C2 N16 C18 C19 160.9 265.1
C2 N16 C18 N23 341.8 84.8
C2 N16 C17 C18 182.5 179.9
C17 N16 C18 C19 343.5 85.0
C17 N16 C18 N23 164.5 264.7
C19 C18 N16 N23 179.0 180.3
N16 C18 C19 C20 180.4 180.0
N16 C18 C19 H12 0.4 360.0
N16 C18 N23 C22 178.9 179.7
N16 C18 C19 N23 181.0 179.7
C19 C18 N23 C22 359.9 359.4
C18 C19 C20 N24 179.5 180.0
C18 C19 C20 N21 1.0 360.0
C20 C19 C18 H12 180.0 180.0
N16 C18 N23 C19 179.0 180.3
N23 C18 C19 C20 359.4 0.3
N23 C18 C19 H12 179.4 180.3
C18 N23 C22 H13 180.4 180.3
C27 C26 C25 C30 358.7 0.3
C26 C27 C28 N31 179.8 180.0
C26 C27 C28 C29 0.1 0.0
C28 C27 C26 H16 180.0 180.0
N24 C25 C26 C30 182.6 179.7
C26 C25 N24 H14 116.3 213.2
C26 C25 C30 C29 1.0 359.5
C26 C25 C30 H18 181.0 179.7
C20 C19 C18 N23 359.4 0.3
C18 C19 C20 H12 180.0 180.0
N21 C20 C19 N24 181.6 180.0
C19 C20 N24 C25 20.7 185.9
C19 C20 N24 H14 200.7 5.9
C28 C27 C26 H15 180.8 180.0
C26 C27 C28 H16 180.0 180.0
C29 C28 C27 N31 180.3 180.1
C27 C28 N31 C32 230.3 180.0
C27 C28 C29 H17 179.6 180.0
H29 C37 C38 H30 240.0 120.1
C38 N31 C32 H19 174.2 179.3
C38 N31 C32 H20 294.2 299.4
C37 N34 C35 H24 320.9 53.8
C37 N34 C35 H25 80.9 173.8
C37 N34 C33 H21 183.7 299.3
C37 N34 C33 H22 303.7 179.3
C19 C20 N24 N21 181.5 180.0
N24 C20 C19 H12 359.5 360.0
C20 N24 C25 C30 118.9 212.9
C25 N24 C20 H14 180.0 179.9
C19 C20 N21 N24 178.5 180.0
N21 C20 C19 H12 181.0 180.0
N21 C20 N24 C25 199.2 5.9
N21 C20 N24 H14 19.2 185.9
C18 N23 C22 N21 0.4 0.6
C22 N21 C20 N24 180.8 180.0
C26 C25 N24 C30 177.4 180.3
C20 N24 C25 H14 180.0 180.1
N24 C25 C30 C29 178.5 179.8
N24 C25 C30 H18 358.5 0.0
C30 C25 N24 H14 298.9 32.9
C25 C30 C29 H17 179.9 180.3
C35 N34 C33 H21 314.4 63.2
C35 N34 C33 H22 74.4 303.2
C36 C35 N34 H24 240.0 240.0
C36 C35 N34 H25 120.0 120.0
N34 C35 C36 H26 180.0 180.0
N34 C35 C36 H27 300.0 300.0
N34 C35 C36 H28 60.0 60.0
H24 C35 N34 H25 240.0 240.1
N34 C33 C32 H19 184.6 181.6
N34 C33 C32 H20 64.6 61.5
C32 C33 N34 H21 240.0 120.0
C32 C33 N34 H22 120.0 240.1
H21 C33 N34 H22 240.0 120.0
N34 C35 C36 H24 120.0 120.0
N34 C35 C36 H25 240.0 240.0
H24 C35 C36 H25 120.0 120.0
H26 C36 C35 H27 240.0 239.9
H26 C36 C35 H28 120.0 120.0
H27 C36 C35 H28 240.0 240.0
C27 C28 N31 C29 180.3 180.1
N31 C28 C27 H16 359.8 360.0
N31 C28 C29 H17 359.8 0.0
C28 N31 C32 C33 186.3 183.2
C28 N31 C32 H19 306.2 303.1
C28 N31 C32 H20 66.2 63.2
C27 C28 C29 N31 179.7 179.9
C29 C28 C27 H16 180.1 180.0
C25 C30 C29 C28 359.9 0.5
C29 C28 N31 C32 50.0 360.0
C30 C29 C28 H17 180.0 179.8
C33 C32 N31 H19 240.0 240.1
C33 C32 N31 H20 120.0 120.0
N31 C32 C33 H21 184.6 61.6
N31 C32 C33 H22 64.6 181.6
H19 C32 N31 H20 240.0 239.9
N34 C33 C32 H21 120.0 240.0
N34 C33 C32 H22 240.0 119.9
N31 C32 C33 H19 120.0 119.9
N31 C32 C33 H20 240.0 240.0
H19 C32 C33 H20 120.0 120.1
H21 C33 C32 H22 120.0 240.0
C25 C30 C29 H18 180.0 180.3
C30 C29 C28 N31 179.9 179.8
C28 C29 C30 H17 180.0 180.2
H1 N3 C2 N16 1.4 357.4
H3 C9 H2 H4 120.0 120.0
H2 C9 H3 H4 240.0 239.9
H2 C9 H4 H3 120.0 120.0
H7 C13 H6 H8 120.0 120.0
H6 C13 H7 H8 240.1 240.0
H6 C13 H8 H7 120.0 120.0
H9 C17 N16 C18 357.5 270.0
H10 C17 H9 H11 120.0 120.0
H10 C17 N16 C18 117.6 30.1
H9 C17 H10 H11 240.0 240.0
H11 C17 N16 C18 237.5 150.0
H9 C17 H11 H10 120.0 120.0
H12 C19 C18 N23 179.4 180.3
C18 C19 H12 C20 180.0 180.0
H12 C19 C20 N24 359.5 360.0
H12 C19 C20 N21 181.0 180.0
C20 N24 H14 C25 180.0 179.9
H14 N24 C25 C30 298.9 32.9
H15 C26 C27 C28 180.8 180.0
H15 C26 C27 H16 0.8 360.0
H15 C26 C25 C30 178.7 180.3
C26 C27 H16 C28 180.0 180.0
H16 C27 C26 H15 0.8 360.0
H16 C27 C28 N31 359.8 360.0
H16 C27 C28 C29 180.1 180.0
H17 C29 C28 N31 359.8 0.0
C25 C30 H18 C29 180.0 179.7
H18 C30 C29 H17 359.9 0.0
N31 C32 H19 C33 240.3 240.2
N31 C32 H19 H20 120.2 120.1
C33 C32 H19 H20 239.8 239.9
H19 C32 C33 H21 64.6 301.6
H19 C32 C33 H22 304.6 61.7
N31 C32 H20 C33 119.7 119.9
N31 C32 H20 H19 239.8 239.9
C33 C32 H20 H19 120.1 120.1
H20 C32 C33 H21 304.7 181.5
H20 C32 C33 H22 184.6 301.6
N34 C33 H21 H22 121.3 240.0
H21 C33 C32 H19 64.6 301.6
H21 C33 C32 H20 304.7 181.5
C32 C33 H21 H22 238.7 120.0
N34 C33 H22 H21 238.7 120.1
H22 C33 C32 H19 304.6 61.7
H22 C33 C32 H20 184.6 301.6
C32 C33 H22 H21 121.3 239.9
N34 C35 H24 C36 241.6 240.0
N34 C35 H24 H25 120.8 120.0
C36 C35 H24 H25 239.2 240.0
H24 C35 C36 H26 60.0 60.0
H24 C35 C36 H27 180.0 180.1
H24 C35 C36 H28 300.0 300.0
N34 C35 H25 C36 118.4 120.0
N34 C35 H25 H24 239.2 240.1
C36 C35 H25 H24 120.8 120.0
H25 C35 C36 H26 300.0 300.0
H25 C35 C36 H27 60.0 60.1
H25 C35 C36 H28 180.0 180.0
H26 C36 C35 H24 60.0 60.0
H26 C36 C35 H25 300.0 300.0
C35 C36 H26 H27 120.0 120.0
C35 C36 H26 H28 240.0 240.0
H27 C36 H26 H28 120.0 120.0
H27 C36 C35 H24 180.0 180.1
H27 C36 C35 H25 60.0 60.1
C35 C36 H27 H26 240.0 240.0
C35 C36 H27 H28 120.0 120.0
H26 C36 H27 H28 240.0 240.0
H28 C36 C35 H24 300.0 300.0
H28 C36 C35 H25 180.0 180.0
C35 C36 H28 H26 120.0 120.0
C35 C36 H28 H27 240.0 240.0
H26 C36 H28 H27 120.0 120.0
C38 C37 H29 H30 120.9 239.9
C38 C37 H30 H29 239.1 120.1
H31 C38 C37 H29 291.0 178.5
H31 C38 C37 H30 51.0 58.4
H32 C38 C37 H29 51.1 58.5
H32 C38 C37 H30 171.1 298.4