PDB Chemical Component 06U
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 06U
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C2 |
N1 |
1.395 |
1.325 |
| N1 |
C6 |
1.401 |
1.328 |
| N3 |
C2 |
1.400 |
1.325 |
| NAH |
C2 |
1.326 |
1.383 |
| N3 |
C4 |
1.408 |
1.323 |
| CAI |
C4 |
1.535 |
1.507 |
| C4 |
C5 |
1.395 |
1.396 |
| C5 |
CAK |
1.430 |
1.432 |
| C5 |
C6 |
1.393 |
1.409 |
| C6 |
NAJ |
1.332 |
1.384 |
| CAY |
CAA |
1.393 |
1.380 |
| CAA |
CAU |
1.394 |
1.397 |
| CAA |
HAA |
1.080 |
1.080 |
| NAH |
HNAH |
1.000 |
0.970 |
| NAH |
HNAA |
1.000 |
0.970 |
| CAZ |
CAI |
1.524 |
1.530 |
| CAI |
HAI |
1.100 |
1.090 |
| CAI |
HAIA |
1.101 |
1.090 |
| NAJ |
HNAJ |
1.000 |
0.970 |
| NAJ |
HNAB |
1.000 |
0.970 |
| CAK |
CAL |
1.223 |
1.174 |
| CAL |
CAM |
1.466 |
1.472 |
| CAO |
CAM |
1.534 |
1.507 |
| CAM |
CAN |
1.528 |
1.530 |
| CAM |
HAM |
1.100 |
1.090 |
| CAN |
HAN |
1.099 |
1.089 |
| CAN |
HANA |
1.100 |
1.090 |
| CAN |
HANB |
1.100 |
1.090 |
| CAP |
CAO |
1.394 |
1.382 |
| CAT |
CAO |
1.396 |
1.380 |
| CAQ |
CAP |
1.398 |
1.388 |
| CAP |
HAP |
1.080 |
1.080 |
| OBA |
CAQ |
1.372 |
1.359 |
| CAR |
CAQ |
1.396 |
1.385 |
| CAR |
CAS |
1.397 |
1.393 |
| CAR |
HAR |
1.080 |
1.080 |
| CAU |
CAS |
1.396 |
1.483 |
| CAS |
CAT |
1.397 |
1.393 |
| CAT |
HAT |
1.080 |
1.080 |
| CAU |
CAV |
1.393 |
1.398 |
| CAW |
CAV |
1.393 |
1.379 |
| CAV |
HAV |
1.080 |
1.080 |
| NAX |
CAW |
1.331 |
1.318 |
| CAW |
HAW |
1.080 |
1.080 |
| CAY |
NAX |
1.330 |
1.320 |
| CAY |
HAY |
1.080 |
1.080 |
| CAZ |
HAZ |
1.100 |
1.090 |
| CAZ |
HAZA |
1.099 |
1.090 |
| CAZ |
HAZB |
1.101 |
1.090 |
| OBA |
CBB |
1.447 |
1.430 |
| CBB |
HBB |
1.100 |
1.090 |
| CBB |
HBBA |
1.100 |
1.090 |
| CBB |
HBBB |
1.100 |
1.090 |
Bond Angles for 06U
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C6 |
119.8 |
120.7 |
| N1 |
C6 |
C5 |
120.1 |
118.9 |
| N1 |
C6 |
NAJ |
119.7 |
120.6 |
| N3 |
C4 |
C5 |
118.6 |
119.1 |
| C4 |
C5 |
CAK |
119.1 |
120.9 |
| C4 |
C5 |
C6 |
121.0 |
118.2 |
| C6 |
C5 |
CAK |
119.9 |
120.9 |
| C5 |
CAK |
CAL |
179.8 |
180.0 |
| C5 |
C6 |
NAJ |
120.2 |
120.5 |
| C6 |
NAJ |
HNAJ |
109.5 |
120.0 |
| C6 |
NAJ |
HNAB |
109.4 |
120.0 |
| CAY |
CAA |
HAA |
120.4 |
120.5 |
| CAU |
CAA |
HAA |
120.4 |
120.5 |
| CAA |
CAU |
CAS |
120.7 |
120.9 |
| CAA |
CAU |
CAV |
118.8 |
118.2 |
| HNAH |
NAH |
HNAA |
109.5 |
120.0 |
| CAZ |
CAI |
HAI |
108.7 |
109.4 |
| CAZ |
CAI |
HAIA |
108.7 |
109.5 |
| HAI |
CAI |
HAIA |
110.2 |
109.5 |
| HNAJ |
NAJ |
HNAB |
109.4 |
120.1 |
| CAK |
CAL |
CAM |
179.1 |
179.9 |
| CAL |
CAM |
CAN |
109.9 |
109.5 |
| CAL |
CAM |
HAM |
109.3 |
109.4 |
| CAO |
CAM |
HAM |
108.2 |
109.5 |
| CAN |
CAM |
HAM |
108.2 |
109.5 |
| CAM |
CAN |
HAN |
109.5 |
109.5 |
| CAM |
CAN |
HANA |
109.5 |
109.5 |
| CAM |
CAN |
HANB |
109.4 |
109.5 |
| HAN |
CAN |
HANA |
109.5 |
109.5 |
| HAN |
CAN |
HANB |
109.4 |
109.5 |
| HANA |
CAN |
HANB |
109.5 |
109.4 |
| CAQ |
CAP |
HAP |
119.7 |
119.9 |
| CAS |
CAR |
HAR |
119.8 |
120.1 |
| CAR |
CAS |
CAT |
119.9 |
119.8 |
| CAS |
CAT |
HAT |
120.0 |
120.0 |
| CAU |
CAV |
HAV |
120.5 |
120.5 |
| CAW |
CAV |
HAV |
120.5 |
120.5 |
| NAX |
CAW |
HAW |
119.6 |
119.5 |
| HAZ |
CAZ |
HAZA |
109.4 |
109.5 |
| HAZ |
CAZ |
HAZB |
109.4 |
109.4 |
| HAZA |
CAZ |
HAZB |
109.5 |
109.4 |
| OBA |
CBB |
HBB |
109.5 |
109.5 |
| OBA |
CBB |
HBBA |
109.5 |
109.5 |
| OBA |
CBB |
HBBB |
109.4 |
109.5 |
| HBB |
CBB |
HBBA |
109.5 |
109.5 |
| HBB |
CBB |
HBBB |
109.5 |
109.5 |
| HBBA |
CBB |
HBBB |
109.5 |
109.5 |
Torsion Angles for 06U
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C6 |
C5 |
0.3 |
359.9 |
| C2 |
N1 |
C6 |
NAJ |
180.1 |
180.0 |
| C4 |
C5 |
C6 |
N1 |
359.8 |
0.0 |
| N1 |
C6 |
C5 |
CAK |
179.9 |
180.0 |
| C5 |
C6 |
N1 |
NAJ |
180.2 |
180.0 |
| N1 |
C6 |
NAJ |
HNAJ |
0.0 |
360.0 |
| N1 |
C6 |
NAJ |
HNAB |
120.0 |
180.0 |
| N3 |
C2 |
N1 |
C6 |
359.8 |
0.0 |
| N3 |
C4 |
C5 |
CAK |
180.0 |
180.0 |
| N3 |
C4 |
C5 |
C6 |
0.1 |
0.0 |
| CAI |
C4 |
C5 |
CAK |
0.8 |
0.0 |
| N1 |
C6 |
C5 |
C4 |
359.8 |
0.0 |
| C6 |
C5 |
C4 |
CAK |
180.1 |
180.0 |
| C4 |
C5 |
CAK |
CAL |
52.7 |
354.6 |
| C4 |
C5 |
C6 |
NAJ |
179.9 |
180.0 |
| C4 |
C5 |
CAK |
C6 |
180.1 |
180.0 |
| CAK |
C5 |
C6 |
NAJ |
0.0 |
360.0 |
| C5 |
CAK |
CAL |
CAM |
187.5 |
195.5 |
| N1 |
C6 |
C5 |
NAJ |
179.8 |
180.0 |
| C4 |
C5 |
C6 |
CAK |
179.9 |
180.0 |
| C6 |
C5 |
CAK |
CAL |
232.6 |
174.6 |
| C5 |
C6 |
NAJ |
HNAJ |
179.9 |
180.0 |
| C5 |
C6 |
NAJ |
HNAB |
299.8 |
360.0 |
| N1 |
C6 |
NAJ |
C5 |
180.2 |
180.0 |
| NAJ |
C6 |
C5 |
CAK |
0.0 |
360.0 |
| HNAJ |
NAJ |
C6 |
HNAB |
240.0 |
180.0 |
| CAU |
CAA |
CAY |
HAA |
180.0 |
179.7 |
| CAY |
CAA |
CAU |
HAA |
180.0 |
180.3 |
| CAA |
CAU |
CAV |
HAV |
180.5 |
180.0 |
| HAA |
CAA |
CAU |
CAS |
359.6 |
359.9 |
| HAA |
CAA |
CAU |
CAV |
179.4 |
180.0 |
| HAI |
CAI |
CAZ |
HAIA |
120.0 |
120.0 |
| CAZ |
CAI |
HAI |
HAIA |
240.9 |
240.0 |
| CAZ |
CAI |
HAIA |
HAI |
119.1 |
119.9 |
| C6 |
NAJ |
HNAJ |
HNAB |
120.0 |
180.0 |
| C6 |
NAJ |
HNAB |
HNAJ |
240.0 |
180.0 |
| CAK |
CAL |
CAM |
CAN |
251.4 |
109.9 |
| CAK |
CAL |
CAM |
HAM |
10.1 |
229.9 |
| CAO |
CAM |
CAL |
HAM |
118.7 |
120.0 |
| CAN |
CAM |
CAL |
HAM |
241.3 |
240.1 |
| CAL |
CAM |
CAN |
HAN |
180.0 |
180.0 |
| CAL |
CAM |
CAN |
HANA |
300.0 |
300.0 |
| CAL |
CAM |
CAN |
HANB |
60.0 |
59.9 |
| CAL |
CAM |
CAO |
HAM |
240.6 |
240.0 |
| CAN |
CAM |
CAO |
HAM |
118.6 |
120.0 |
| CAO |
CAM |
CAN |
HAN |
302.0 |
300.0 |
| CAO |
CAM |
CAN |
HANA |
62.0 |
60.0 |
| CAO |
CAM |
CAN |
HANB |
182.0 |
180.0 |
| CAL |
CAM |
CAN |
HAM |
119.4 |
119.9 |
| CAO |
CAM |
CAN |
HAM |
241.4 |
240.0 |
| HAN |
CAN |
CAM |
HANA |
240.0 |
240.0 |
| HAN |
CAN |
CAM |
HANB |
120.0 |
120.0 |
| HANA |
CAN |
CAM |
HANB |
240.0 |
240.0 |
| CAL |
CAM |
HAM |
CAN |
240.3 |
240.1 |
| HAM |
CAM |
CAN |
HAN |
60.6 |
60.0 |
| HAM |
CAM |
CAN |
HANA |
180.6 |
180.1 |
| HAM |
CAM |
CAN |
HANB |
300.6 |
300.0 |
| HAN |
CAN |
CAM |
HAM |
60.6 |
60.0 |
| CAM |
CAN |
HAN |
HANA |
120.0 |
120.0 |
| CAM |
CAN |
HAN |
HANB |
240.0 |
240.0 |
| HANA |
CAN |
HAN |
HANB |
120.0 |
120.0 |
| HANA |
CAN |
CAM |
HAM |
180.6 |
180.1 |
| CAM |
CAN |
HANA |
HAN |
240.0 |
240.0 |
| CAM |
CAN |
HANA |
HANB |
120.0 |
120.0 |
| HAN |
CAN |
HANA |
HANB |
240.0 |
240.0 |
| HANB |
CAN |
CAM |
HAM |
300.6 |
300.0 |
| CAM |
CAN |
HANB |
HAN |
120.0 |
120.0 |
| CAM |
CAN |
HANB |
HANA |
240.0 |
240.0 |
| HAN |
CAN |
HANB |
HANA |
120.0 |
120.0 |
| CAP |
CAO |
CAM |
HAM |
11.1 |
180.0 |
| CAT |
CAO |
CAM |
HAM |
190.2 |
359.7 |
| OBA |
CAQ |
CAP |
HAP |
359.7 |
0.0 |
| CAR |
CAQ |
CAP |
HAP |
180.4 |
180.0 |
| CAA |
CAU |
CAS |
CAR |
17.8 |
0.0 |
| CAR |
CAS |
CAT |
HAT |
181.1 |
180.0 |
| HAR |
CAR |
CAS |
CAT |
179.7 |
179.8 |
| CAS |
CAU |
CAA |
HAA |
359.6 |
359.9 |
| CAA |
CAU |
CAS |
CAV |
179.8 |
180.0 |
| CAU |
CAS |
CAR |
HAR |
359.8 |
0.0 |
| CAU |
CAS |
CAT |
HAT |
1.0 |
359.8 |
| CAA |
CAU |
CAS |
CAT |
197.9 |
180.3 |
| CAT |
CAS |
CAR |
HAR |
179.7 |
179.8 |
| CAV |
CAU |
CAA |
HAA |
179.4 |
180.0 |
| CAA |
CAU |
CAV |
CAS |
180.2 |
180.0 |
| CAW |
CAV |
CAU |
HAV |
180.0 |
180.1 |
| CAU |
CAV |
CAW |
HAV |
180.0 |
179.9 |
| NAX |
CAW |
CAV |
HAV |
179.8 |
180.0 |
| HAW |
CAW |
CAV |
HAV |
359.8 |
0.1 |
| NAX |
CAY |
CAA |
HAA |
180.4 |
179.8 |
| CAY |
NAX |
CAW |
HAW |
180.0 |
179.7 |
| HAY |
CAY |
CAA |
HAA |
0.4 |
0.3 |
| HAZ |
CAZ |
CAI |
HAI |
60.0 |
60.0 |
| HAZ |
CAZ |
CAI |
HAIA |
300.0 |
300.0 |
| HAZA |
CAZ |
HAZ |
HAZB |
120.0 |
120.0 |
| HAZA |
CAZ |
CAI |
HAI |
180.0 |
180.0 |
| HAZA |
CAZ |
CAI |
HAIA |
60.0 |
60.0 |
| HAZ |
CAZ |
HAZA |
HAZB |
240.0 |
240.0 |
| HAZB |
CAZ |
CAI |
HAI |
300.0 |
300.0 |
| HAZB |
CAZ |
CAI |
HAIA |
180.0 |
180.0 |
| HAZ |
CAZ |
HAZB |
HAZA |
120.0 |
120.0 |
| HBB |
CBB |
OBA |
HBBA |
240.0 |
240.0 |
| HBB |
CBB |
OBA |
HBBB |
120.0 |
120.0 |
| HBBA |
CBB |
OBA |
HBBB |
240.0 |
240.0 |
| OBA |
CBB |
HBB |
HBBA |
120.0 |
120.0 |
| OBA |
CBB |
HBB |
HBBB |
240.0 |
240.0 |
| HBBA |
CBB |
HBB |
HBBB |
120.0 |
120.0 |
| OBA |
CBB |
HBBA |
HBB |
240.0 |
240.0 |
| OBA |
CBB |
HBBA |
HBBB |
120.0 |
120.0 |
| HBB |
CBB |
HBBA |
HBBB |
240.0 |
240.0 |
| OBA |
CBB |
HBBB |
HBB |
120.0 |
120.0 |
| OBA |
CBB |
HBBB |
HBBA |
240.0 |
240.0 |
| HBB |
CBB |
HBBB |
HBBA |
120.0 |
120.0 |