PDB Chemical Component 069
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 069
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C3 |
O3 |
1.354 |
1.360 |
C3 |
C2 |
1.385 |
1.385 |
C3 |
C4 |
1.387 |
1.388 |
C2 |
C1 |
1.384 |
1.395 |
C1 |
C |
1.568 |
1.478 |
C1 |
C6 |
1.417 |
1.396 |
C |
O |
1.250 |
1.215 |
C |
N |
1.339 |
1.347 |
N |
O2 |
1.381 |
1.416 |
C6 |
C5 |
1.404 |
1.380 |
C5 |
C4 |
1.409 |
1.383 |
O3 |
H3 |
0.950 |
0.967 |
C2 |
H2 |
1.080 |
1.080 |
C4 |
H4 |
1.080 |
1.081 |
C6 |
H6 |
1.080 |
1.080 |
N |
H |
1.000 |
0.969 |
O2 |
HA |
0.950 |
0.967 |
C5 |
H5 |
1.080 |
1.080 |
Bond Angles for 069
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O3 |
C3 |
C2 |
117.2 |
119.9 |
O3 |
C3 |
C4 |
120.1 |
120.0 |
C3 |
O3 |
H3 |
109.5 |
114.0 |
C2 |
C3 |
C4 |
122.7 |
120.0 |
C3 |
C2 |
C1 |
120.9 |
119.8 |
C3 |
C2 |
H2 |
119.5 |
120.1 |
C3 |
C4 |
C5 |
117.5 |
120.3 |
C3 |
C4 |
H4 |
121.2 |
119.9 |
C2 |
C1 |
C |
119.0 |
120.1 |
C2 |
C1 |
C6 |
117.7 |
119.8 |
C1 |
C2 |
H2 |
119.6 |
120.1 |
C |
C1 |
C6 |
123.3 |
120.1 |
C1 |
C |
O |
121.4 |
120.0 |
C1 |
C |
N |
114.5 |
120.0 |
C1 |
C6 |
C5 |
121.2 |
120.0 |
C1 |
C6 |
H6 |
119.4 |
120.0 |
O |
C |
N |
123.9 |
120.0 |
C |
N |
O2 |
122.5 |
120.0 |
C |
N |
H |
118.8 |
120.0 |
O2 |
N |
H |
118.8 |
120.0 |
N |
O2 |
HA |
109.5 |
114.0 |
C6 |
C5 |
C4 |
120.1 |
120.2 |
C5 |
C6 |
H6 |
119.4 |
120.0 |
C6 |
C5 |
H5 |
120.0 |
119.9 |
C5 |
C4 |
H4 |
121.2 |
119.8 |
C4 |
C5 |
H5 |
120.0 |
120.0 |
Torsion Angles for 069
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C3 |
O3 |
C4 |
179.5 |
180.2 |
O3 |
C3 |
C2 |
C1 |
182.0 |
180.0 |
O3 |
C3 |
C2 |
H2 |
2.0 |
0.1 |
O3 |
C3 |
C4 |
C5 |
179.1 |
179.7 |
O3 |
C3 |
C4 |
H4 |
359.1 |
360.0 |
O3 |
C3 |
C2 |
C4 |
180.5 |
179.8 |
C2 |
C3 |
O3 |
H3 |
316.3 |
90.0 |
C2 |
C3 |
C4 |
C5 |
359.6 |
359.5 |
C2 |
C3 |
C4 |
H4 |
179.6 |
179.7 |
C3 |
C2 |
C1 |
C |
176.9 |
180.1 |
C3 |
C2 |
C1 |
C6 |
358.8 |
0.1 |
C1 |
C2 |
C3 |
H2 |
180.0 |
179.9 |
O3 |
C3 |
C4 |
C2 |
179.5 |
180.2 |
C4 |
C3 |
O3 |
H3 |
136.8 |
269.7 |
C4 |
C3 |
C2 |
C1 |
1.5 |
0.2 |
C4 |
C3 |
C2 |
H2 |
181.5 |
180.3 |
C6 |
C5 |
C4 |
C3 |
359.1 |
0.5 |
C5 |
C4 |
C3 |
H4 |
180.0 |
179.7 |
C3 |
C4 |
C5 |
H5 |
179.1 |
180.3 |
C1 |
C2 |
C3 |
C4 |
1.5 |
0.2 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.1 |
C |
C1 |
C2 |
C6 |
178.2 |
180.0 |
C2 |
C1 |
C |
O |
2.8 |
0.0 |
C2 |
C1 |
C |
N |
187.6 |
180.0 |
C2 |
C1 |
C6 |
C5 |
360.0 |
360.0 |
C2 |
C1 |
C6 |
H6 |
180.0 |
180.0 |
C2 |
C1 |
C |
C6 |
181.9 |
180.0 |
C |
C1 |
C2 |
H2 |
356.9 |
360.0 |
C |
C1 |
C6 |
C5 |
181.9 |
180.0 |
C |
C1 |
C6 |
H6 |
1.9 |
360.0 |
O |
C |
C1 |
N |
175.2 |
180.0 |
C1 |
C |
N |
O2 |
176.9 |
180.0 |
C1 |
C |
N |
H |
356.9 |
360.0 |
C2 |
C1 |
C6 |
C |
178.1 |
180.0 |
C6 |
C1 |
C2 |
H2 |
178.8 |
180.0 |
C6 |
C1 |
C |
O |
180.8 |
180.0 |
C6 |
C1 |
C |
N |
5.7 |
0.0 |
C1 |
C6 |
C5 |
C4 |
1.1 |
359.8 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C1 |
C6 |
C5 |
H5 |
181.1 |
180.0 |
O |
C |
C1 |
C6 |
180.8 |
180.0 |
C1 |
C |
O |
N |
185.3 |
180.0 |
O |
C |
N |
O2 |
1.9 |
0.0 |
O |
C |
N |
H |
181.9 |
180.0 |
N |
C |
C1 |
C6 |
5.7 |
0.0 |
C1 |
C |
N |
O |
175.0 |
180.0 |
O2 |
N |
C |
H |
180.0 |
180.0 |
C |
N |
O2 |
HA |
223.4 |
180.0 |
C |
N |
O2 |
H |
180.0 |
180.0 |
C3 |
C4 |
C5 |
C6 |
359.1 |
0.5 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
H4 |
179.1 |
180.3 |
C4 |
C5 |
C6 |
H5 |
180.0 |
179.8 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.3 |
C4 |
C5 |
C6 |
H6 |
181.1 |
179.7 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.2 |
H3 |
O3 |
C3 |
C2 |
316.3 |
90.0 |
H3 |
O3 |
C3 |
C4 |
136.8 |
269.7 |
H2 |
C2 |
C3 |
C4 |
181.5 |
180.3 |
C3 |
C2 |
H2 |
C1 |
180.0 |
179.9 |
H2 |
C2 |
C1 |
C |
356.9 |
360.0 |
H2 |
C2 |
C1 |
C6 |
178.8 |
180.0 |
C3 |
C4 |
H4 |
C5 |
180.0 |
179.7 |
H4 |
C4 |
C5 |
H5 |
359.2 |
0.0 |
C1 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
C4 |
181.1 |
179.7 |
H6 |
C6 |
C5 |
H5 |
1.0 |
360.0 |
C |
N |
H |
O2 |
180.0 |
180.0 |
H |
N |
O2 |
HA |
43.4 |
0.1 |
HA |
O2 |
N |
H |
43.4 |
0.1 |
C6 |
C5 |
H5 |
C4 |
180.0 |
179.8 |
H5 |
C5 |
C6 |
H6 |
1.0 |
360.0 |
H5 |
C5 |
C4 |
H4 |
359.2 |
0.0 |