PDB Chemical Component 064
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 064
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C3 |
C1 |
1.393 |
1.484 |
| C1 |
C2 |
1.404 |
1.424 |
| C1 |
N4 |
1.382 |
1.310 |
| N4 |
O9 |
1.300 |
1.208 |
| C2 |
C5 |
1.388 |
1.353 |
| C5 |
O9 |
1.384 |
1.340 |
| C5 |
C10 |
1.548 |
1.507 |
| C6 |
O11 |
1.482 |
1.429 |
| C6 |
C2 |
1.549 |
1.507 |
| C6 |
H6 |
1.100 |
1.090 |
| C6 |
H6A |
1.100 |
1.090 |
| C12 |
C7 |
1.412 |
1.382 |
| CL13 |
C7 |
1.783 |
1.736 |
| C7 |
C3 |
1.459 |
1.394 |
| C14 |
C8 |
1.409 |
1.382 |
| C3 |
C8 |
1.463 |
1.394 |
| C8 |
CL15 |
1.767 |
1.736 |
| C10 |
C17 |
1.526 |
1.530 |
| C10 |
C16 |
1.558 |
1.530 |
| C10 |
H10 |
1.100 |
1.089 |
| C16 |
H16 |
1.100 |
1.090 |
| C16 |
H16A |
1.099 |
1.089 |
| C16 |
H16B |
1.100 |
1.090 |
| C17 |
H17 |
1.100 |
1.090 |
| C17 |
H17A |
1.100 |
1.090 |
| C17 |
H17B |
1.100 |
1.090 |
| C21 |
C18 |
1.455 |
1.389 |
| C18 |
C20 |
1.424 |
1.389 |
| C18 |
O11 |
1.403 |
1.358 |
| C12 |
C19 |
1.410 |
1.383 |
| C19 |
C14 |
1.445 |
1.383 |
| C19 |
H19 |
1.080 |
1.079 |
| C22 |
C20 |
1.397 |
1.380 |
| C20 |
H20 |
1.080 |
1.080 |
| C23 |
C21 |
1.435 |
1.378 |
| C21 |
H21 |
1.080 |
1.080 |
| C24 |
C22 |
1.426 |
1.399 |
| C22 |
CL25 |
1.737 |
1.735 |
| C23 |
C24 |
1.461 |
1.398 |
| C23 |
H23 |
1.080 |
1.080 |
| C26 |
C24 |
1.507 |
1.473 |
| C27 |
C26 |
1.290 |
1.343 |
| C26 |
H26 |
1.080 |
1.080 |
| C28 |
C27 |
1.486 |
1.473 |
| C27 |
H27 |
1.080 |
1.080 |
| C30 |
C28 |
1.453 |
1.399 |
| C28 |
C29 |
1.389 |
1.395 |
| C31 |
C29 |
1.403 |
1.393 |
| C29 |
H29 |
1.080 |
1.080 |
| C32 |
C30 |
1.439 |
1.381 |
| C30 |
H30 |
1.080 |
1.080 |
| C32 |
C33 |
1.437 |
1.380 |
| C32 |
H32 |
1.080 |
1.080 |
| C12 |
H12 |
1.079 |
1.081 |
| C14 |
H14 |
1.080 |
1.080 |
| C33 |
C31 |
1.425 |
1.398 |
| C31 |
C34 |
1.516 |
1.477 |
| C33 |
H33 |
1.080 |
1.081 |
| O35 |
C34 |
1.366 |
1.215 |
| C34 |
O36 |
1.248 |
1.347 |
| O36 |
HO36 |
0.950 |
0.967 |
Bond Angles for 064
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N4 |
C1 |
C2 |
106.8 |
106.1 |
| C1 |
C2 |
C5 |
104.7 |
103.9 |
| C1 |
C2 |
C6 |
130.9 |
128.0 |
| C1 |
N4 |
O9 |
111.6 |
111.4 |
| N4 |
O9 |
C5 |
106.8 |
111.9 |
| C2 |
C5 |
O9 |
110.0 |
106.7 |
| C10 |
C5 |
O9 |
122.0 |
126.7 |
| C5 |
C10 |
C17 |
110.2 |
109.4 |
| C5 |
C10 |
C16 |
112.2 |
109.5 |
| C5 |
C10 |
H10 |
107.1 |
109.5 |
| C2 |
C6 |
O11 |
114.1 |
109.5 |
| O11 |
C6 |
H6 |
108.0 |
109.5 |
| O11 |
C6 |
H6A |
106.9 |
109.4 |
| C6 |
O11 |
C18 |
118.5 |
117.0 |
| C2 |
C6 |
H6 |
108.0 |
109.4 |
| C2 |
C6 |
H6A |
106.9 |
109.5 |
| H6 |
C6 |
H6A |
113.1 |
109.5 |
| C7 |
C3 |
C8 |
118.9 |
119.7 |
| C14 |
C8 |
CL15 |
116.4 |
120.1 |
| C3 |
C8 |
CL15 |
124.6 |
120.1 |
| C16 |
C10 |
C17 |
109.6 |
109.5 |
| C17 |
C10 |
H10 |
109.9 |
109.4 |
| C10 |
C17 |
H17 |
109.5 |
109.5 |
| C10 |
C17 |
H17A |
109.5 |
109.5 |
| C10 |
C17 |
H17B |
109.5 |
109.5 |
| C16 |
C10 |
H10 |
107.8 |
109.5 |
| C10 |
C16 |
H16 |
109.5 |
109.4 |
| C10 |
C16 |
H16A |
109.5 |
109.5 |
| C10 |
C16 |
H16B |
109.4 |
109.5 |
| H16 |
C16 |
H16A |
109.4 |
109.5 |
| H16 |
C16 |
H16B |
109.5 |
109.5 |
| H16A |
C16 |
H16B |
109.5 |
109.5 |
| H17 |
C17 |
H17A |
109.5 |
109.5 |
| H17 |
C17 |
H17B |
109.4 |
109.5 |
| H17A |
C17 |
H17B |
109.5 |
109.4 |
| C21 |
C18 |
O11 |
117.9 |
119.9 |
| C20 |
C18 |
O11 |
122.3 |
119.9 |
| C18 |
C20 |
H20 |
119.9 |
120.0 |
| C12 |
C19 |
C14 |
120.8 |
120.2 |
| C12 |
C19 |
H19 |
119.6 |
119.9 |
| C14 |
C19 |
H19 |
119.6 |
119.9 |
| C19 |
C14 |
H14 |
119.6 |
119.9 |
| C22 |
C20 |
H20 |
119.9 |
119.9 |
| C23 |
C21 |
H21 |
119.8 |
120.0 |
| C24 |
C22 |
CL25 |
121.4 |
120.1 |
| C24 |
C23 |
H23 |
121.1 |
120.1 |
| C27 |
C26 |
H26 |
117.7 |
120.0 |
| C28 |
C27 |
H27 |
115.4 |
120.0 |
| C28 |
C29 |
H29 |
118.7 |
120.1 |
| C31 |
C29 |
H29 |
118.7 |
120.1 |
| C32 |
C30 |
H30 |
121.2 |
120.0 |
| C33 |
C32 |
H32 |
119.9 |
119.9 |
| C32 |
C33 |
C31 |
120.7 |
120.2 |
| C32 |
C33 |
H33 |
119.7 |
119.9 |
| C33 |
C31 |
C34 |
120.7 |
120.1 |
| C31 |
C34 |
O36 |
121.2 |
120.0 |
| O35 |
C34 |
O36 |
119.5 |
120.0 |
| C34 |
O36 |
HO36 |
109.5 |
117.0 |
Torsion Angles for 064
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C3 |
C1 |
N4 |
O9 |
179.1 |
179.7 |
| C2 |
C1 |
N4 |
O9 |
359.7 |
0.0 |
| C1 |
C2 |
C5 |
O9 |
359.4 |
0.0 |
| C1 |
C2 |
C6 |
O11 |
57.3 |
96.0 |
| C1 |
C2 |
C6 |
H6 |
297.2 |
215.9 |
| C1 |
C2 |
C6 |
H6A |
175.2 |
336.0 |
| N4 |
C1 |
C2 |
C5 |
0.5 |
360.0 |
| N4 |
C1 |
C2 |
C6 |
179.8 |
179.9 |
| C1 |
N4 |
O9 |
C5 |
359.9 |
360.0 |
| O9 |
N4 |
C1 |
C2 |
359.7 |
0.0 |
| C2 |
C5 |
O9 |
N4 |
0.4 |
0.0 |
| C10 |
C5 |
O9 |
N4 |
181.5 |
180.0 |
| C1 |
C2 |
C5 |
C6 |
179.4 |
180.0 |
| N4 |
O9 |
C5 |
C2 |
0.4 |
0.0 |
| C10 |
C5 |
C2 |
O9 |
178.9 |
180.0 |
| C2 |
C5 |
C10 |
H10 |
351.1 |
359.9 |
| O9 |
C5 |
C10 |
C17 |
50.3 |
60.0 |
| O9 |
C5 |
C10 |
C16 |
287.9 |
300.0 |
| O9 |
C5 |
C10 |
H10 |
169.8 |
179.9 |
| C1 |
C2 |
C5 |
C10 |
178.3 |
180.0 |
| N4 |
O9 |
C5 |
C10 |
181.5 |
180.0 |
| C2 |
C5 |
C10 |
O9 |
181.2 |
180.0 |
| C16 |
C10 |
C5 |
C17 |
237.6 |
240.0 |
| C17 |
C10 |
C5 |
H10 |
240.5 |
240.1 |
| C5 |
C10 |
C17 |
H17 |
65.7 |
60.0 |
| C5 |
C10 |
C17 |
H17A |
185.7 |
180.0 |
| C5 |
C10 |
C17 |
H17B |
305.7 |
300.0 |
| C16 |
C10 |
C5 |
H10 |
118.1 |
120.1 |
| C5 |
C10 |
C16 |
H16 |
125.7 |
60.0 |
| C5 |
C10 |
C16 |
H16A |
245.7 |
180.0 |
| C5 |
C10 |
C16 |
H16B |
5.7 |
300.0 |
| C2 |
C6 |
O11 |
H6 |
240.0 |
119.9 |
| C2 |
C6 |
O11 |
H6A |
118.0 |
240.0 |
| H6 |
C6 |
O11 |
H6A |
238.0 |
120.0 |
| C21 |
C18 |
O11 |
C6 |
8.0 |
359.7 |
| C20 |
C18 |
O11 |
C6 |
188.0 |
180.0 |
| C1 |
C2 |
C6 |
C5 |
180.7 |
180.0 |
| C6 |
C2 |
C5 |
O9 |
180.0 |
180.0 |
| O11 |
C6 |
C2 |
H6 |
120.0 |
240.0 |
| O11 |
C6 |
C2 |
H6A |
242.0 |
120.0 |
| C2 |
C6 |
O11 |
C18 |
203.2 |
180.0 |
| H6 |
C6 |
C2 |
H6A |
122.0 |
239.9 |
| C2 |
C6 |
H6 |
O11 |
123.8 |
240.1 |
| O11 |
C6 |
H6 |
H6A |
118.1 |
240.0 |
| H6 |
C6 |
O11 |
C18 |
323.2 |
60.0 |
| C2 |
C6 |
H6 |
H6A |
241.9 |
120.1 |
| C2 |
C6 |
H6A |
O11 |
237.4 |
120.0 |
| O11 |
C6 |
H6A |
H6 |
241.3 |
120.0 |
| H6A |
C6 |
O11 |
C18 |
85.2 |
300.0 |
| C2 |
C6 |
H6A |
H6 |
118.7 |
240.0 |
| C7 |
C3 |
C8 |
CL15 |
180.3 |
180.0 |
| C3 |
C8 |
C14 |
CL15 |
182.5 |
179.9 |
| C14 |
C8 |
C3 |
CL15 |
177.3 |
180.1 |
| C17 |
C10 |
C5 |
O9 |
50.3 |
60.0 |
| C5 |
C10 |
C17 |
C16 |
236.1 |
240.0 |
| C5 |
C10 |
C17 |
H10 |
117.8 |
120.0 |
| C16 |
C10 |
C17 |
H10 |
241.8 |
240.0 |
| C17 |
C10 |
C16 |
H16 |
3.0 |
300.0 |
| C17 |
C10 |
C16 |
H16A |
123.0 |
60.0 |
| C17 |
C10 |
C16 |
H16B |
243.0 |
180.0 |
| H17 |
C17 |
C10 |
H17A |
240.0 |
240.0 |
| H17 |
C17 |
C10 |
H17B |
120.0 |
120.0 |
| H17A |
C17 |
C10 |
H17B |
240.0 |
240.0 |
| C16 |
C10 |
C5 |
O9 |
287.9 |
300.0 |
| C5 |
C10 |
C16 |
C17 |
122.7 |
120.0 |
| C5 |
C10 |
C16 |
H10 |
242.3 |
240.0 |
| C17 |
C10 |
C16 |
H10 |
119.6 |
120.0 |
| C16 |
C10 |
C17 |
H17 |
189.6 |
180.0 |
| C16 |
C10 |
C17 |
H17A |
309.7 |
300.0 |
| C16 |
C10 |
C17 |
H17B |
69.7 |
60.0 |
| H16 |
C16 |
C10 |
H16A |
240.0 |
240.0 |
| H16 |
C16 |
C10 |
H16B |
120.0 |
120.0 |
| H16A |
C16 |
C10 |
H16B |
240.0 |
240.0 |
| H10 |
C10 |
C5 |
O9 |
169.8 |
179.9 |
| C5 |
C10 |
H10 |
C17 |
240.3 |
240.1 |
| C5 |
C10 |
H10 |
C16 |
120.9 |
120.0 |
| C16 |
C10 |
H10 |
C17 |
119.4 |
120.0 |
| H10 |
C10 |
C17 |
H17 |
307.9 |
300.0 |
| H10 |
C10 |
C17 |
H17A |
67.9 |
60.0 |
| H10 |
C10 |
C17 |
H17B |
187.9 |
180.0 |
| H10 |
C10 |
C16 |
H16 |
243.4 |
180.0 |
| H10 |
C10 |
C16 |
H16A |
3.4 |
300.0 |
| H10 |
C10 |
C16 |
H16B |
123.4 |
60.0 |
| H16 |
C16 |
C10 |
C17 |
3.0 |
300.0 |
| H16 |
C16 |
C10 |
H10 |
243.4 |
180.0 |
| C10 |
C16 |
H16 |
H16A |
120.0 |
120.0 |
| C10 |
C16 |
H16 |
H16B |
240.0 |
240.0 |
| H16A |
C16 |
H16 |
H16B |
120.0 |
120.0 |
| H16A |
C16 |
C10 |
C17 |
123.0 |
60.0 |
| H16A |
C16 |
C10 |
H10 |
3.4 |
300.0 |
| C10 |
C16 |
H16A |
H16 |
240.0 |
240.0 |
| C10 |
C16 |
H16A |
H16B |
120.0 |
120.0 |
| H16 |
C16 |
H16A |
H16B |
240.0 |
240.0 |
| H16B |
C16 |
C10 |
C17 |
243.0 |
180.0 |
| H16B |
C16 |
C10 |
H10 |
123.4 |
60.0 |
| C10 |
C16 |
H16B |
H16 |
120.0 |
120.0 |
| C10 |
C16 |
H16B |
H16A |
240.0 |
240.0 |
| H16 |
C16 |
H16B |
H16A |
120.0 |
120.0 |
| H17 |
C17 |
C10 |
H10 |
307.9 |
300.0 |
| C10 |
C17 |
H17 |
H17A |
120.0 |
120.0 |
| C10 |
C17 |
H17 |
H17B |
240.0 |
239.9 |
| H17A |
C17 |
H17 |
H17B |
120.0 |
119.9 |
| H17A |
C17 |
C10 |
H10 |
67.9 |
60.0 |
| C10 |
C17 |
H17A |
H17 |
240.0 |
240.0 |
| C10 |
C17 |
H17A |
H17B |
120.0 |
120.0 |
| H17 |
C17 |
H17A |
H17B |
240.0 |
240.1 |
| H17B |
C17 |
C10 |
H10 |
187.9 |
180.0 |
| C10 |
C17 |
H17B |
H17 |
120.0 |
120.1 |
| C10 |
C17 |
H17B |
H17A |
240.0 |
240.0 |
| H17 |
C17 |
H17B |
H17A |
120.0 |
119.9 |
| C6 |
O11 |
C18 |
C21 |
8.0 |
359.7 |
| C20 |
C18 |
C21 |
O11 |
180.0 |
179.7 |
| C21 |
C18 |
C20 |
H20 |
178.0 |
180.3 |
| C6 |
O11 |
C18 |
C20 |
188.0 |
180.0 |
| C21 |
C18 |
C20 |
O11 |
180.0 |
180.3 |
| C22 |
C20 |
C18 |
H20 |
180.0 |
180.0 |
| C18 |
O11 |
C6 |
H6 |
323.2 |
60.0 |
| C18 |
O11 |
C6 |
H6A |
85.2 |
300.0 |
| O11 |
C18 |
C20 |
H20 |
358.0 |
360.0 |
| C14 |
C19 |
C12 |
H19 |
180.0 |
180.1 |
| C12 |
C19 |
C14 |
H14 |
178.3 |
180.1 |
| C19 |
C14 |
C8 |
CL15 |
179.8 |
180.1 |
| C12 |
C19 |
C14 |
H19 |
180.0 |
179.9 |
| C12 |
C19 |
H19 |
C14 |
180.0 |
180.1 |
| H19 |
C19 |
C14 |
H14 |
358.3 |
0.1 |
| C22 |
C20 |
C18 |
O11 |
178.0 |
180.0 |
| C18 |
C20 |
C22 |
H20 |
180.0 |
180.0 |
| H20 |
C20 |
C18 |
O11 |
358.0 |
360.0 |
| C23 |
C21 |
C18 |
O11 |
182.0 |
180.3 |
| H21 |
C21 |
C18 |
O11 |
2.0 |
0.3 |
| C24 |
C22 |
C20 |
H20 |
181.8 |
180.0 |
| CL25 |
C22 |
C20 |
H20 |
0.0 |
360.0 |
| C24 |
C23 |
C21 |
H21 |
178.3 |
179.5 |
| C23 |
C24 |
C22 |
CL25 |
180.2 |
179.5 |
| H23 |
C23 |
C21 |
H21 |
358.3 |
0.0 |
| C26 |
C24 |
C22 |
CL25 |
2.6 |
0.3 |
| C26 |
C24 |
C23 |
H23 |
358.9 |
359.5 |
| C28 |
C27 |
C26 |
H26 |
8.8 |
359.9 |
| H27 |
C27 |
C26 |
H26 |
188.8 |
180.0 |
| C30 |
C28 |
C27 |
H27 |
35.3 |
179.7 |
| C30 |
C28 |
C29 |
H29 |
182.3 |
180.2 |
| C29 |
C28 |
C27 |
H27 |
218.5 |
359.9 |
| C31 |
C29 |
C28 |
H29 |
180.0 |
179.9 |
| C28 |
C29 |
C31 |
H29 |
180.0 |
180.1 |
| C33 |
C32 |
C30 |
H30 |
181.3 |
180.0 |
| C32 |
C33 |
C31 |
C34 |
178.7 |
179.8 |
| H32 |
C32 |
C30 |
H30 |
1.3 |
360.0 |
| H32 |
C32 |
C33 |
C31 |
179.9 |
180.3 |
| H32 |
C32 |
C33 |
H33 |
359.9 |
0.1 |
| H12 |
C12 |
C19 |
C14 |
181.1 |
180.0 |
| H12 |
C12 |
C19 |
H19 |
1.1 |
360.0 |
| H14 |
C14 |
C8 |
CL15 |
359.8 |
360.0 |
| H14 |
C14 |
C19 |
H19 |
358.3 |
0.1 |
| C33 |
C31 |
C29 |
H29 |
179.0 |
180.0 |
| C31 |
C33 |
C32 |
H32 |
179.9 |
180.3 |
| C32 |
C33 |
C31 |
H33 |
180.0 |
179.8 |
| C33 |
C31 |
C34 |
O36 |
181.3 |
0.0 |
| C34 |
C31 |
C29 |
H29 |
0.3 |
360.0 |
| O35 |
C34 |
C31 |
O36 |
179.5 |
180.0 |
| C31 |
C34 |
O36 |
HO36 |
179.4 |
180.0 |
| H33 |
C33 |
C32 |
H32 |
359.9 |
0.1 |
| C32 |
C33 |
H33 |
C31 |
180.0 |
180.2 |
| H33 |
C33 |
C31 |
C34 |
358.7 |
360.0 |
| C31 |
C34 |
O35 |
O36 |
180.5 |
180.0 |
| O35 |
C34 |
O36 |
HO36 |
360.0 |
360.0 |