PDB Chemical Component 05W
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 05W
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C22 |
C |
1.562 |
1.530 |
| C22 |
C24 |
1.523 |
1.531 |
| C22 |
C23 |
1.527 |
1.530 |
| C |
O |
1.433 |
1.429 |
| C |
CA |
1.542 |
1.530 |
| C24 |
O7 |
1.430 |
1.429 |
| C25 |
C26 |
1.532 |
1.529 |
| C25 |
CA |
1.538 |
1.531 |
| C27 |
C26 |
1.523 |
1.530 |
| C26 |
C28 |
1.518 |
1.530 |
| CA |
N |
1.457 |
1.468 |
| N |
H |
1.000 |
1.009 |
| CA |
HA |
1.099 |
1.090 |
| C25 |
H14 |
1.100 |
1.091 |
| C25 |
H15 |
1.100 |
1.089 |
| C26 |
H16 |
1.100 |
1.090 |
| C28 |
H17 |
1.100 |
1.090 |
| C28 |
H18 |
1.101 |
1.090 |
| C28 |
H19 |
1.100 |
1.089 |
| C27 |
H20 |
1.099 |
1.091 |
| C27 |
H21 |
1.100 |
1.090 |
| C27 |
H22 |
1.100 |
1.090 |
| C |
H23 |
1.100 |
1.091 |
| C22 |
H24 |
1.100 |
1.090 |
| C23 |
H25 |
1.100 |
1.090 |
| C23 |
H26 |
1.100 |
1.090 |
| C23 |
H27 |
1.100 |
1.091 |
| C24 |
H28 |
1.100 |
1.089 |
| C24 |
H29 |
1.100 |
1.090 |
| O7 |
H30 |
0.950 |
0.968 |
| O |
H31 |
0.950 |
0.967 |
| N |
H2 |
1.000 |
1.009 |
Bond Angles for 05W
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C22 |
C |
O |
109.1 |
109.5 |
| C22 |
C |
H23 |
106.8 |
109.5 |
| C23 |
C22 |
C24 |
107.6 |
109.5 |
| C22 |
C24 |
O7 |
111.0 |
109.5 |
| C24 |
C22 |
H24 |
108.9 |
109.4 |
| C22 |
C24 |
H28 |
109.1 |
109.5 |
| C22 |
C24 |
H29 |
109.1 |
109.4 |
| C23 |
C22 |
H24 |
108.8 |
109.5 |
| C22 |
C23 |
H25 |
109.5 |
109.5 |
| C22 |
C23 |
H26 |
109.5 |
109.4 |
| C22 |
C23 |
H27 |
109.5 |
109.5 |
| O |
C |
H23 |
108.3 |
109.5 |
| C |
O |
H31 |
109.5 |
114.0 |
| C |
CA |
HA |
108.8 |
109.5 |
| O7 |
C24 |
H28 |
109.1 |
109.5 |
| O7 |
C24 |
H29 |
109.1 |
109.5 |
| C24 |
O7 |
H30 |
109.5 |
114.0 |
| C25 |
C26 |
C28 |
114.7 |
109.5 |
| C26 |
C25 |
H14 |
107.2 |
109.5 |
| C26 |
C25 |
H15 |
107.2 |
109.5 |
| C25 |
C26 |
H16 |
107.7 |
109.5 |
| C25 |
CA |
HA |
108.8 |
109.4 |
| C27 |
C26 |
H16 |
107.8 |
109.4 |
| C28 |
C26 |
H16 |
107.9 |
109.5 |
| C26 |
C28 |
H17 |
109.5 |
109.4 |
| C26 |
C28 |
H18 |
109.5 |
109.4 |
| C26 |
C28 |
H19 |
109.5 |
109.5 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.4 |
111.0 |
| H |
N |
H2 |
109.5 |
110.9 |
| H14 |
C25 |
H15 |
109.5 |
109.5 |
| H17 |
C28 |
H18 |
109.4 |
109.5 |
| H17 |
C28 |
H19 |
109.5 |
109.5 |
| H18 |
C28 |
H19 |
109.5 |
109.5 |
| H20 |
C27 |
H21 |
109.5 |
109.4 |
| H20 |
C27 |
H22 |
109.4 |
109.5 |
| H21 |
C27 |
H22 |
109.5 |
109.5 |
| H25 |
C23 |
H26 |
109.4 |
109.5 |
| H25 |
C23 |
H27 |
109.5 |
109.4 |
| H26 |
C23 |
H27 |
109.5 |
109.5 |
| H28 |
C24 |
H29 |
109.5 |
109.5 |
Torsion Angles for 05W
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O |
C |
C22 |
H23 |
243.1 |
240.0 |
| C22 |
C |
O |
H31 |
180.0 |
300.0 |
| C22 |
C |
CA |
HA |
317.0 |
298.1 |
| C24 |
C22 |
C |
O |
23.2 |
185.0 |
| C24 |
C22 |
C |
H23 |
140.1 |
305.1 |
| C23 |
C22 |
C24 |
H24 |
117.8 |
120.0 |
| C24 |
C22 |
C23 |
H25 |
302.7 |
55.2 |
| C24 |
C22 |
C23 |
H26 |
62.7 |
175.2 |
| C24 |
C22 |
C23 |
H27 |
182.7 |
295.3 |
| O7 |
C24 |
C22 |
H28 |
239.8 |
240.0 |
| O7 |
C24 |
C22 |
H29 |
120.2 |
120.0 |
| C22 |
C24 |
O7 |
H30 |
180.0 |
180.0 |
| H28 |
C24 |
C22 |
H29 |
240.5 |
240.0 |
| C23 |
C22 |
C |
O |
143.6 |
305.0 |
| C23 |
C22 |
C |
H23 |
260.4 |
65.1 |
| C23 |
C22 |
C24 |
O7 |
289.3 |
65.0 |
| C24 |
C22 |
C23 |
H24 |
242.2 |
240.0 |
| C23 |
C22 |
C24 |
H28 |
49.6 |
185.0 |
| C23 |
C22 |
C24 |
H29 |
169.1 |
305.0 |
| H25 |
C23 |
C22 |
H26 |
240.0 |
240.0 |
| H25 |
C23 |
C22 |
H27 |
120.0 |
120.0 |
| H26 |
C23 |
C22 |
H27 |
240.0 |
240.0 |
| C22 |
C |
O |
H23 |
115.9 |
120.0 |
| O |
C |
CA |
HA |
193.2 |
178.1 |
| C25 |
CA |
C |
HA |
241.1 |
240.1 |
| C |
CA |
N |
H |
180.0 |
293.9 |
| C |
CA |
N |
H2 |
300.0 |
57.8 |
| O7 |
C24 |
C22 |
H24 |
171.5 |
305.0 |
| C22 |
C24 |
O7 |
H28 |
120.2 |
120.0 |
| C22 |
C24 |
O7 |
H29 |
239.8 |
240.0 |
| H28 |
C24 |
O7 |
H29 |
119.5 |
120.0 |
| C26 |
C25 |
CA |
HA |
12.5 |
55.0 |
| C27 |
C26 |
C25 |
H16 |
242.7 |
240.0 |
| C28 |
C26 |
C25 |
H16 |
120.2 |
120.0 |
| C25 |
C26 |
C28 |
H17 |
180.0 |
60.0 |
| C25 |
C26 |
C28 |
H18 |
300.0 |
180.0 |
| C25 |
C26 |
C28 |
H19 |
60.0 |
300.0 |
| H14 |
C25 |
C26 |
H15 |
242.6 |
120.0 |
| C |
CA |
C25 |
HA |
118.9 |
120.0 |
| C25 |
CA |
N |
H |
60.2 |
173.9 |
| C25 |
CA |
N |
H2 |
180.2 |
297.8 |
| C27 |
C26 |
C25 |
H14 |
297.7 |
175.1 |
| C27 |
C26 |
C25 |
H15 |
55.2 |
55.0 |
| C25 |
C26 |
C27 |
H16 |
117.3 |
120.0 |
| C28 |
C26 |
C27 |
H16 |
243.5 |
240.0 |
| C27 |
C26 |
C28 |
H17 |
56.5 |
300.0 |
| C27 |
C26 |
C28 |
H18 |
176.5 |
59.9 |
| C27 |
C26 |
C28 |
H19 |
296.5 |
180.0 |
| C28 |
C26 |
C25 |
H14 |
175.2 |
55.0 |
| C28 |
C26 |
C25 |
H15 |
292.7 |
295.0 |
| C25 |
C26 |
C28 |
H16 |
239.9 |
239.9 |
| C27 |
C26 |
C28 |
H16 |
116.4 |
119.9 |
| H17 |
C28 |
C26 |
H18 |
240.0 |
240.0 |
| H17 |
C28 |
C26 |
H19 |
120.0 |
120.0 |
| H18 |
C28 |
C26 |
H19 |
240.0 |
240.0 |
| H |
N |
CA |
H2 |
240.0 |
236.1 |
| CA |
N |
H |
H2 |
120.0 |
123.9 |
| HA |
CA |
N |
H |
304.7 |
54.0 |
| HA |
CA |
N |
H2 |
64.7 |
177.9 |
| H14 |
C25 |
C26 |
C28 |
175.2 |
55.0 |
| C26 |
C25 |
H14 |
H15 |
115.9 |
239.9 |
| H14 |
C25 |
C26 |
H16 |
55.1 |
295.0 |
| H14 |
C25 |
CA |
HA |
251.2 |
175.0 |
| H15 |
C25 |
C26 |
C28 |
292.7 |
295.0 |
| C26 |
C25 |
H15 |
H14 |
244.1 |
120.0 |
| H15 |
C25 |
C26 |
H16 |
172.5 |
175.0 |
| H15 |
C25 |
CA |
HA |
133.8 |
295.0 |
| C25 |
C26 |
H16 |
C28 |
124.4 |
120.0 |
| H16 |
C26 |
C25 |
H14 |
55.1 |
295.0 |
| H16 |
C26 |
C25 |
H15 |
172.5 |
175.0 |
| H16 |
C26 |
C28 |
H17 |
300.1 |
180.1 |
| H16 |
C26 |
C28 |
H18 |
60.1 |
300.0 |
| H16 |
C26 |
C28 |
H19 |
180.1 |
60.0 |
| H17 |
C28 |
C26 |
H16 |
300.1 |
180.1 |
| C26 |
C28 |
H17 |
H18 |
120.0 |
119.9 |
| C26 |
C28 |
H17 |
H19 |
240.0 |
240.0 |
| H18 |
C28 |
H17 |
H19 |
120.0 |
120.1 |
| H18 |
C28 |
C26 |
H16 |
60.1 |
300.0 |
| C26 |
C28 |
H18 |
H17 |
240.0 |
240.1 |
| C26 |
C28 |
H18 |
H19 |
120.0 |
120.0 |
| H17 |
C28 |
H18 |
H19 |
240.0 |
239.9 |
| H19 |
C28 |
C26 |
H16 |
180.1 |
60.0 |
| C26 |
C28 |
H19 |
H17 |
120.0 |
120.0 |
| C26 |
C28 |
H19 |
H18 |
240.0 |
240.0 |
| H17 |
C28 |
H19 |
H18 |
120.0 |
120.0 |
| H20 |
C27 |
C26 |
H16 |
62.7 |
180.0 |
| H21 |
C27 |
H20 |
H22 |
120.0 |
120.0 |
| H21 |
C27 |
C26 |
H16 |
182.7 |
300.0 |
| H20 |
C27 |
H21 |
H22 |
240.0 |
240.0 |
| H22 |
C27 |
C26 |
H16 |
302.7 |
60.0 |
| H20 |
C27 |
H22 |
H21 |
120.0 |
119.9 |
| C22 |
C |
H23 |
O |
242.6 |
240.0 |
| H23 |
C |
O |
H31 |
64.1 |
180.0 |
| H23 |
C |
CA |
HA |
76.9 |
58.1 |
| H24 |
C22 |
C |
O |
263.2 |
65.0 |
| H24 |
C22 |
C |
H23 |
20.1 |
185.1 |
| C23 |
C22 |
H24 |
C24 |
243.0 |
240.0 |
| H24 |
C22 |
C24 |
O7 |
171.5 |
305.0 |
| H24 |
C22 |
C24 |
H28 |
291.8 |
65.0 |
| H24 |
C22 |
C24 |
H29 |
51.3 |
185.0 |
| H24 |
C22 |
C23 |
H25 |
60.6 |
175.2 |
| H24 |
C22 |
C23 |
H26 |
180.6 |
295.2 |
| H24 |
C22 |
C23 |
H27 |
300.6 |
55.2 |
| H25 |
C23 |
C22 |
C24 |
302.7 |
55.2 |
| H25 |
C23 |
C22 |
H24 |
60.6 |
175.2 |
| C22 |
C23 |
H25 |
H26 |
120.0 |
120.0 |
| C22 |
C23 |
H25 |
H27 |
240.0 |
240.0 |
| H26 |
C23 |
H25 |
H27 |
120.0 |
120.0 |
| H26 |
C23 |
C22 |
C24 |
62.7 |
175.2 |
| H26 |
C23 |
C22 |
H24 |
180.6 |
295.2 |
| C22 |
C23 |
H26 |
H25 |
240.0 |
240.0 |
| C22 |
C23 |
H26 |
H27 |
120.0 |
120.0 |
| H25 |
C23 |
H26 |
H27 |
240.0 |
240.0 |
| H27 |
C23 |
C22 |
C24 |
182.7 |
295.3 |
| H27 |
C23 |
C22 |
H24 |
300.6 |
55.2 |
| C22 |
C23 |
H27 |
H25 |
120.0 |
120.0 |
| C22 |
C23 |
H27 |
H26 |
240.0 |
240.0 |
| H25 |
C23 |
H27 |
H26 |
120.0 |
120.0 |
| C22 |
C24 |
H28 |
O7 |
238.6 |
240.0 |
| H28 |
C24 |
C22 |
H24 |
291.8 |
65.0 |
| C22 |
C24 |
H28 |
H29 |
119.3 |
120.0 |
| O7 |
C24 |
H28 |
H29 |
240.7 |
240.0 |
| H28 |
C24 |
O7 |
H30 |
59.8 |
60.0 |
| C22 |
C24 |
H29 |
O7 |
121.4 |
120.0 |
| H29 |
C24 |
C22 |
H24 |
51.3 |
185.0 |
| C22 |
C24 |
H29 |
H28 |
240.7 |
240.0 |
| O7 |
C24 |
H29 |
H28 |
119.3 |
120.1 |
| H29 |
C24 |
O7 |
H30 |
300.2 |
300.0 |
| H30 |
O7 |
C24 |
H28 |
59.8 |
60.0 |
| H30 |
O7 |
C24 |
H29 |
300.2 |
300.0 |
| H31 |
O |
C |
H23 |
64.1 |
180.0 |
| CA |
N |
H2 |
H |
240.0 |
236.1 |