PDB Chemical Component 04A
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 04A
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
OAA |
CBB |
1.239 |
1.213 |
CBC |
OAB |
1.232 |
1.214 |
CAF |
CAC |
1.398 |
1.382 |
CAC |
CAE |
1.400 |
1.383 |
CAC |
HAC |
1.080 |
1.079 |
CAG |
CAD |
1.407 |
1.382 |
CAH |
CAD |
1.396 |
1.382 |
CAD |
HAD |
1.080 |
1.081 |
CAE |
CAI |
1.394 |
1.382 |
CAE |
HAE |
1.080 |
1.080 |
CAF |
CAJ |
1.395 |
1.383 |
CAF |
HAF |
1.080 |
1.080 |
CAK |
CAG |
1.413 |
1.382 |
CAG |
HAG |
1.080 |
1.080 |
CAL |
CAH |
1.413 |
1.383 |
CAH |
HAH |
1.080 |
1.081 |
CBD |
CAI |
1.386 |
1.382 |
CAI |
HAI |
1.080 |
1.080 |
CAJ |
CBD |
1.396 |
1.381 |
CAJ |
HAJ |
1.081 |
1.081 |
CBE |
CAK |
1.411 |
1.382 |
CAK |
HAK |
1.080 |
1.080 |
CBE |
CAL |
1.415 |
1.382 |
CAL |
HAL |
1.080 |
1.080 |
CAO |
CAM |
1.495 |
1.530 |
CAM |
SAY |
1.814 |
1.814 |
CAM |
HAM |
1.100 |
1.090 |
CAM |
HAMA |
1.100 |
1.090 |
SAY |
CAN |
1.816 |
1.813 |
CAP |
CAN |
1.522 |
1.531 |
CAN |
HAN |
1.100 |
1.091 |
CAN |
HANA |
1.100 |
1.090 |
CAO |
CBF |
1.531 |
1.507 |
CAO |
HAO |
1.100 |
1.090 |
CAO |
HAOA |
1.100 |
1.090 |
CBG |
CAP |
1.540 |
1.507 |
CAP |
HAP |
1.100 |
1.090 |
CAP |
HAPA |
1.100 |
1.089 |
CBB |
CAQ |
1.531 |
1.507 |
CBD |
CAQ |
1.363 |
1.507 |
CAQ |
HAQ |
1.100 |
1.090 |
CAQ |
HAQA |
1.100 |
1.090 |
CAR |
CBE |
1.440 |
1.507 |
CAR |
CBC |
1.562 |
1.507 |
CAR |
HAR |
1.100 |
1.090 |
CAR |
HARA |
1.100 |
1.090 |
CBF |
NAS |
1.376 |
1.295 |
NAS |
NAU |
1.343 |
1.263 |
NAV |
NAT |
1.394 |
1.262 |
NAT |
CBG |
1.357 |
1.296 |
CBH |
NAU |
1.350 |
1.299 |
NAV |
CBI |
1.347 |
1.299 |
CBB |
NAW |
1.346 |
1.348 |
CBH |
NAW |
1.325 |
1.391 |
NAW |
HNAW |
1.000 |
0.970 |
NAX |
CBI |
1.355 |
1.390 |
NAX |
CBC |
1.350 |
1.347 |
NAX |
HNAX |
1.000 |
0.970 |
SAZ |
CBF |
1.628 |
1.764 |
SAZ |
CBH |
1.757 |
1.713 |
CBI |
SBA |
1.831 |
1.713 |
CBG |
SBA |
1.680 |
1.763 |
Bond Angles for 04A
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
OAA |
CBB |
CAQ |
121.8 |
120.0 |
OAA |
CBB |
NAW |
126.3 |
120.0 |
CAF |
CAC |
HAC |
119.7 |
120.0 |
CAE |
CAC |
HAC |
119.7 |
120.0 |
CAC |
CAE |
CAI |
120.3 |
120.0 |
CAC |
CAE |
HAE |
119.9 |
120.0 |
CAG |
CAD |
HAD |
120.9 |
120.0 |
CAH |
CAD |
HAD |
120.9 |
120.0 |
CAI |
CAE |
HAE |
119.9 |
120.0 |
CAE |
CAI |
HAI |
120.7 |
119.9 |
CAJ |
CAF |
HAF |
120.4 |
120.0 |
CAF |
CAJ |
CBD |
119.5 |
120.0 |
CAF |
CAJ |
HAJ |
120.3 |
119.9 |
CAK |
CAG |
HAG |
119.1 |
120.0 |
CAL |
CAH |
HAH |
120.0 |
120.0 |
CBD |
CAI |
HAI |
120.7 |
120.0 |
CBD |
CAJ |
HAJ |
120.3 |
120.0 |
CAJ |
CBD |
CAQ |
118.8 |
120.0 |
CBE |
CAK |
HAK |
119.6 |
120.0 |
CBE |
CAL |
HAL |
118.6 |
120.0 |
CAO |
CAM |
SAY |
113.2 |
109.5 |
CAO |
CAM |
HAM |
108.5 |
109.5 |
CAO |
CAM |
HAMA |
108.6 |
109.5 |
SAY |
CAM |
HAM |
108.5 |
109.5 |
SAY |
CAM |
HAMA |
108.5 |
109.5 |
CAM |
SAY |
CAN |
94.3 |
103.0 |
HAM |
CAM |
HAMA |
109.5 |
109.5 |
SAY |
CAN |
HAN |
108.7 |
109.5 |
SAY |
CAN |
HANA |
108.8 |
109.5 |
CAP |
CAN |
HAN |
108.7 |
109.5 |
CAP |
CAN |
HANA |
108.7 |
109.4 |
HAN |
CAN |
HANA |
109.4 |
109.4 |
CBF |
CAO |
HAO |
108.6 |
109.5 |
CBF |
CAO |
HAOA |
108.6 |
109.5 |
CAO |
CBF |
NAS |
128.5 |
126.2 |
CAO |
CBF |
SAZ |
119.2 |
126.1 |
HAO |
CAO |
HAOA |
109.4 |
109.5 |
CBG |
CAP |
HAP |
109.7 |
109.5 |
CBG |
CAP |
HAPA |
109.7 |
109.5 |
HAP |
CAP |
HAPA |
109.5 |
109.5 |
CBB |
CAQ |
HAQ |
108.5 |
109.4 |
CBB |
CAQ |
HAQA |
108.5 |
109.4 |
CBD |
CAQ |
HAQ |
108.5 |
109.5 |
CBD |
CAQ |
HAQA |
108.5 |
109.5 |
HAQ |
CAQ |
HAQA |
109.5 |
109.5 |
CBC |
CAR |
CBE |
111.2 |
109.5 |
CBE |
CAR |
HAR |
109.0 |
109.5 |
CBE |
CAR |
HARA |
109.0 |
109.5 |
CBC |
CAR |
HAR |
109.0 |
109.5 |
CBC |
CAR |
HARA |
109.1 |
109.4 |
CAR |
CBC |
NAX |
117.1 |
120.1 |
HAR |
CAR |
HARA |
109.5 |
109.5 |
NAV |
NAT |
CBG |
115.1 |
116.5 |
NAT |
CBG |
SBA |
111.2 |
107.7 |
NAV |
CBI |
NAX |
122.7 |
125.7 |
NAV |
CBI |
SBA |
107.2 |
108.7 |
CBB |
NAW |
HNAW |
119.0 |
120.0 |
CBH |
NAW |
HNAW |
119.0 |
120.0 |
CBC |
NAX |
CBI |
120.3 |
120.0 |
CBI |
NAX |
HNAX |
119.8 |
120.0 |
NAX |
CBI |
SBA |
130.0 |
125.7 |
CBC |
NAX |
HNAX |
119.9 |
120.0 |
CBF |
SAZ |
CBH |
90.6 |
89.3 |
Torsion Angles for 04A
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
OAA |
CBB |
CAQ |
HAQ |
152.3 |
120.0 |
OAA |
CBB |
CAQ |
HAQA |
271.1 |
240.0 |
OAA |
CBB |
NAW |
HNAW |
193.6 |
179.9 |
CAE |
CAC |
CAF |
HAC |
180.0 |
179.7 |
CAF |
CAC |
CAE |
CAI |
359.9 |
0.2 |
CAF |
CAC |
CAE |
HAE |
179.9 |
180.2 |
CAF |
CAC |
CAE |
HAC |
180.0 |
180.3 |
CAI |
CAE |
CAC |
HAE |
180.0 |
180.0 |
CAC |
CAE |
CAI |
HAI |
179.1 |
180.0 |
HAC |
CAC |
CAE |
CAI |
179.9 |
180.0 |
HAC |
CAC |
CAE |
HAE |
359.9 |
360.0 |
CAH |
CAD |
CAG |
HAD |
180.0 |
180.2 |
CAG |
CAD |
CAH |
HAD |
180.0 |
179.8 |
CAI |
CAE |
CAC |
HAC |
179.9 |
180.0 |
CAC |
CAE |
CAI |
HAE |
180.0 |
180.0 |
CBD |
CAI |
CAE |
HAI |
180.0 |
180.1 |
HAE |
CAE |
CAC |
HAC |
359.9 |
360.0 |
CAC |
CAE |
HAE |
CAI |
180.0 |
180.0 |
HAE |
CAE |
CAI |
HAI |
359.1 |
360.0 |
CAJ |
CAF |
CAC |
HAC |
180.5 |
180.3 |
CBD |
CAJ |
CAF |
HAJ |
180.0 |
179.4 |
CAF |
CAJ |
CBD |
CAQ |
180.4 |
180.0 |
HAF |
CAF |
CAC |
HAC |
0.6 |
0.2 |
HAF |
CAF |
CAJ |
CBD |
180.0 |
179.5 |
HAF |
CAF |
CAJ |
HAJ |
360.0 |
0.1 |
CAK |
CAG |
CAD |
HAD |
180.3 |
180.1 |
HAG |
CAG |
CAD |
HAD |
0.3 |
0.0 |
CAL |
CAH |
CAD |
HAD |
179.4 |
179.9 |
HAH |
CAH |
CAD |
HAD |
359.5 |
359.9 |
CBD |
CAI |
CAE |
HAE |
179.1 |
180.0 |
CAE |
CAI |
CBD |
HAI |
180.0 |
179.9 |
CAF |
CAJ |
CBD |
CAI |
359.0 |
0.9 |
HAI |
CAI |
CAE |
HAE |
359.1 |
360.0 |
CBD |
CAJ |
CAF |
HAF |
180.0 |
179.5 |
CAF |
CAJ |
CBD |
HAJ |
180.0 |
180.6 |
CAJ |
CBD |
CAI |
HAI |
181.5 |
179.5 |
CAJ |
CBD |
CAQ |
HAQ |
134.3 |
330.0 |
CAJ |
CBD |
CAQ |
HAQA |
15.5 |
210.0 |
HAJ |
CAJ |
CAF |
HAF |
360.0 |
0.1 |
CAF |
CAJ |
HAJ |
CBD |
180.0 |
179.4 |
HAJ |
CAJ |
CBD |
CAQ |
0.4 |
359.4 |
CBE |
CAK |
CAG |
HAG |
180.0 |
180.1 |
HAK |
CAK |
CAG |
HAG |
360.0 |
0.1 |
CBE |
CAL |
CAH |
HAH |
180.6 |
180.0 |
CAL |
CBE |
CAK |
HAK |
180.0 |
179.8 |
HAL |
CAL |
CAH |
HAH |
0.5 |
0.0 |
SAY |
CAM |
CAO |
HAM |
239.5 |
240.0 |
SAY |
CAM |
CAO |
HAMA |
120.5 |
120.0 |
CAO |
CAM |
SAY |
CAN |
225.3 |
180.0 |
HAM |
CAM |
CAO |
HAMA |
241.1 |
240.0 |
CAO |
CAM |
SAY |
HAM |
120.5 |
120.0 |
CAO |
CAM |
SAY |
HAMA |
239.4 |
240.0 |
HAM |
CAM |
SAY |
HAMA |
118.9 |
120.0 |
CAM |
SAY |
CAN |
HAN |
41.8 |
60.0 |
CAM |
SAY |
CAN |
HANA |
160.9 |
300.0 |
CAO |
CAM |
HAM |
SAY |
236.6 |
240.0 |
CAO |
CAM |
HAM |
HAMA |
118.3 |
120.0 |
SAY |
CAM |
HAM |
HAMA |
241.7 |
240.0 |
HAM |
CAM |
SAY |
CAN |
104.7 |
60.0 |
CAO |
CAM |
HAMA |
SAY |
123.4 |
120.0 |
CAO |
CAM |
HAMA |
HAM |
241.7 |
240.0 |
SAY |
CAM |
HAMA |
HAM |
118.3 |
120.0 |
HAMA |
CAM |
SAY |
CAN |
345.8 |
300.0 |
CAN |
SAY |
CAM |
HAM |
104.7 |
60.0 |
CAN |
SAY |
CAM |
HAMA |
345.8 |
300.0 |
CAP |
CAN |
SAY |
HAN |
239.5 |
120.0 |
CAP |
CAN |
SAY |
HANA |
120.4 |
240.0 |
HAN |
CAN |
SAY |
HANA |
240.9 |
120.0 |
CAM |
SAY |
CAN |
CAP |
281.4 |
180.0 |
SAY |
CAN |
CAP |
HAN |
120.5 |
239.9 |
SAY |
CAN |
CAP |
HANA |
239.5 |
120.0 |
HAN |
CAN |
CAP |
HANA |
119.1 |
240.1 |
SAY |
CAN |
HAN |
HANA |
118.7 |
240.0 |
CAP |
CAN |
HAN |
HANA |
241.4 |
119.9 |
SAY |
CAN |
HANA |
HAN |
241.3 |
120.0 |
CAP |
CAN |
HANA |
HAN |
118.6 |
240.1 |
CBF |
CAO |
CAM |
SAY |
45.0 |
180.0 |
CBF |
CAO |
CAM |
HAM |
165.5 |
300.0 |
CBF |
CAO |
CAM |
HAMA |
284.5 |
60.0 |
HAO |
CAO |
CBF |
HAOA |
118.9 |
120.0 |
CAO |
CBF |
SAZ |
CBH |
179.9 |
180.0 |
HAO |
CAO |
CAM |
SAY |
165.5 |
300.0 |
HAO |
CAO |
CAM |
HAM |
286.1 |
60.0 |
HAO |
CAO |
CAM |
HAMA |
45.0 |
180.0 |
CBF |
CAO |
HAO |
HAOA |
241.6 |
240.0 |
HAO |
CAO |
CBF |
NAS |
284.6 |
330.1 |
HAO |
CAO |
CBF |
SAZ |
104.4 |
150.0 |
HAOA |
CAO |
CAM |
SAY |
284.5 |
60.0 |
HAOA |
CAO |
CAM |
HAM |
45.0 |
180.0 |
HAOA |
CAO |
CAM |
HAMA |
163.9 |
300.0 |
CBF |
CAO |
HAOA |
HAO |
118.4 |
120.0 |
HAOA |
CAO |
CBF |
NAS |
165.7 |
210.1 |
HAOA |
CAO |
CBF |
SAZ |
345.5 |
30.0 |
CBG |
CAP |
CAN |
HAN |
189.5 |
300.1 |
CBG |
CAP |
CAN |
HANA |
70.4 |
60.0 |
HAP |
CAP |
CBG |
HAPA |
120.3 |
120.1 |
HAP |
CAP |
CAN |
HAN |
309.4 |
60.0 |
HAP |
CAP |
CAN |
HANA |
190.3 |
179.9 |
CBG |
CAP |
HAP |
HAPA |
239.6 |
240.0 |
HAPA |
CAP |
CAN |
HAN |
69.6 |
180.0 |
HAPA |
CAP |
CAN |
HANA |
310.6 |
299.9 |
CBG |
CAP |
HAPA |
HAP |
120.4 |
120.0 |
OAA |
CBB |
CAQ |
NAW |
175.7 |
180.0 |
CAJ |
CBD |
CAQ |
CBB |
254.9 |
90.0 |
CBD |
CAQ |
CBB |
HAQ |
239.4 |
240.0 |
CBD |
CAQ |
CBB |
HAQA |
120.6 |
120.0 |
HAQ |
CAQ |
CBB |
HAQA |
241.2 |
240.0 |
CAQ |
CBD |
CAI |
HAI |
0.1 |
0.3 |
CAQ |
CBD |
CAJ |
HAJ |
0.4 |
359.4 |
CBB |
CAQ |
CBD |
HAQ |
120.6 |
120.0 |
CBB |
CAQ |
CBD |
HAQA |
239.4 |
240.0 |
HAQ |
CAQ |
CBD |
HAQA |
118.8 |
120.0 |
CBB |
CAQ |
HAQ |
HAQA |
118.2 |
119.9 |
CBD |
CAQ |
HAQ |
HAQA |
241.8 |
239.9 |
CBB |
CAQ |
HAQA |
HAQ |
241.8 |
240.1 |
CBD |
CAQ |
HAQA |
HAQ |
118.2 |
120.1 |
CAR |
CBE |
CAK |
HAK |
0.9 |
360.0 |
CAR |
CBE |
CAL |
HAL |
358.8 |
0.0 |
CBC |
CAR |
CBE |
HAR |
239.8 |
120.0 |
CBC |
CAR |
CBE |
HARA |
120.3 |
240.0 |
CBE |
CAR |
CBC |
NAX |
141.7 |
180.0 |
HAR |
CAR |
CBE |
HARA |
240.5 |
120.0 |
CBE |
CAR |
CBC |
HAR |
120.2 |
240.0 |
CBE |
CAR |
CBC |
HARA |
239.8 |
120.0 |
HAR |
CAR |
CBC |
HARA |
119.5 |
240.0 |
CAR |
CBC |
NAX |
CBI |
185.3 |
180.0 |
CAR |
CBC |
NAX |
HNAX |
5.3 |
359.9 |
CBC |
CAR |
HAR |
CBE |
121.6 |
240.0 |
CBE |
CAR |
HAR |
HARA |
119.2 |
240.0 |
CBC |
CAR |
HAR |
HARA |
240.8 |
120.0 |
HAR |
CAR |
CBC |
NAX |
21.5 |
300.0 |
CBC |
CAR |
HARA |
CBE |
238.4 |
120.0 |
CBE |
CAR |
HARA |
HAR |
240.8 |
120.0 |
CBC |
CAR |
HARA |
HAR |
119.2 |
240.0 |
HARA |
CAR |
CBC |
NAX |
262.0 |
60.0 |
NAS |
CBF |
CAO |
HAO |
284.6 |
330.1 |
NAS |
CBF |
CAO |
HAOA |
165.7 |
210.1 |
CAO |
CBF |
NAS |
SAZ |
179.8 |
180.0 |
CAO |
CBF |
NAS |
NAU |
180.0 |
180.0 |
NAV |
NAT |
CBG |
SBA |
359.4 |
359.9 |
NAT |
CBG |
CAP |
HAP |
341.9 |
330.0 |
NAT |
CBG |
CAP |
HAPA |
221.7 |
210.0 |
CBI |
NAV |
NAT |
CBG |
0.5 |
0.1 |
CBC |
NAX |
CBI |
NAV |
162.5 |
360.0 |
NAV |
CBI |
NAX |
HNAX |
342.5 |
180.0 |
NAX |
CBI |
NAV |
SBA |
181.7 |
179.9 |
OAA |
CBB |
NAW |
CAQ |
184.6 |
180.0 |
NAW |
CBB |
CAQ |
HAQ |
336.7 |
300.0 |
NAW |
CBB |
CAQ |
HAQA |
95.5 |
60.0 |
CBH |
NAW |
CBB |
HNAW |
180.0 |
180.1 |
CBB |
NAW |
CBH |
HNAW |
180.0 |
179.9 |
NAV |
CBI |
NAX |
SBA |
177.9 |
180.1 |
CBC |
NAX |
CBI |
HNAX |
180.0 |
180.0 |
NAX |
CBC |
CAR |
CBE |
141.7 |
180.0 |
NAX |
CBC |
CAR |
HAR |
21.5 |
300.0 |
NAX |
CBC |
CAR |
HARA |
262.0 |
60.0 |
NAV |
CBI |
NAX |
CBC |
162.5 |
360.0 |
CBI |
NAX |
CBC |
HNAX |
180.0 |
180.0 |
CBC |
NAX |
CBI |
SBA |
344.6 |
179.9 |
CBC |
NAX |
HNAX |
CBI |
180.0 |
180.0 |
HNAX |
NAX |
CBI |
SBA |
164.6 |
359.9 |
SAZ |
CBF |
CAO |
HAO |
104.4 |
150.0 |
SAZ |
CBF |
CAO |
HAOA |
345.5 |
30.0 |
CAO |
CBF |
SAZ |
NAS |
180.1 |
180.0 |
SAZ |
CBH |
NAW |
HNAW |
181.6 |
0.1 |
NAV |
CBI |
SBA |
NAX |
181.8 |
179.9 |
SBA |
CBI |
NAX |
HNAX |
164.6 |
359.9 |
SBA |
CBG |
CAP |
HAP |
163.0 |
150.1 |
SBA |
CBG |
CAP |
HAPA |
42.7 |
30.0 |
NAV |
CBI |
SBA |
CBG |
359.8 |
359.9 |
NAX |
CBI |
SBA |
CBG |
178.0 |
180.0 |