PDB Chemical Component 045

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 045

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 O5 1.441 1.429
C1 O1 1.446 1.429
C1 C2 1.548 1.531
O1 CAQ 1.450 1.429
C2 C3 1.541 1.531
C2 O2 1.434 1.429
C3 C4 1.526 1.533
C3 O3 1.432 1.429
C4 O4 1.431 1.429
C4 C5 1.521 1.531
C5 O5 1.429 1.429
C5 C6 1.525 1.530
C6 O6 1.434 1.429
OAA CAQ 1.434 1.438
OAA CAR 1.435 1.444
OAC CAU 1.433 1.428
OAC CAW 1.429 1.429
OAD CAZ 1.435 1.437
OAD CAU 1.434 1.432
OAF CAS 1.435 1.430
OAG CAT 1.427 1.430
OAH CAV 1.429 1.429
OAI CAX 1.430 1.429
OAJ CBA 1.433 1.429
OAN CBF 1.430 1.429
OAO CBG 1.433 1.429
CAQ CAS 1.538 1.541
CAQ CBA 1.530 1.530
CAR CAT 1.516 1.550
CAR CAW 1.521 1.530
CAS CAT 1.521 1.548
CAU CAV 1.519 1.544
CAU CBF 1.529 1.530
CAV CAX 1.515 1.553
CAX CAZ 1.522 1.550
CAZ CBG 1.525 1.530
C1 H1 1.100 1.090
C2 H2 1.099 1.090
O2 HO2 0.950 0.967
C3 H3 1.100 1.090
O3 HO3 0.950 0.967
C4 H4 1.100 1.090
O4 HO4 0.950 0.968
C5 H5 1.100 1.090
C6 H6A 1.100 1.091
C6 H6 1.100 1.090
O6 HO6 0.950 0.967
OAF HOAF 0.950 0.967
OAG HOAG 0.950 0.967
OAH HOAH 0.950 0.967
OAI HOAI 0.950 0.968
OAJ HOAJ 0.950 0.967
OAN HOAN 0.950 0.967
OAO HOAO 0.950 0.967
CAR HAR 1.100 1.090
CAS HAS 1.100 1.090
CAT HAT 1.100 1.090
CAV HAV 1.100 1.090
CAW HAW 1.100 1.090
CAW HAWA 1.100 1.090
CAX HAX 1.100 1.090
CAZ HAZ 1.100 1.090
CBA HBA 1.100 1.091
CBA HBAA 1.100 1.090
CBF HBF 1.100 1.090
CBF HBFA 1.100 1.090
CBG HBG 1.100 1.090
CBG HBGA 1.100 1.090

Bond Angles for 045

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O5 C1 O1 109.3 109.5
C2 C1 O5 112.1 109.4
C1 O5 C5 113.8 114.1
O5 C1 H1 107.8 109.5
C2 C1 O1 113.1 109.5
C1 O1 CAQ 121.1 114.0
O1 C1 H1 107.8 109.5
C1 C2 C3 117.2 109.2
C1 C2 O2 109.7 109.5
C2 C1 H1 106.5 109.5
C1 C2 H2 106.8 109.6
C3 C2 O2 107.7 109.5
C2 C3 C4 115.0 109.0
C2 C3 O3 109.1 109.6
C3 C2 H2 106.9 109.5
C2 C3 H3 107.4 109.5
O2 C2 H2 108.2 109.6
C2 O2 HO2 109.5 114.0
C4 C3 O3 108.9 109.6
C3 C4 O4 108.9 109.5
C3 C4 C5 108.6 109.1
C4 C3 H3 107.5 109.5
C3 C4 H4 109.1 109.5
O3 C3 H3 108.7 109.6
C3 O3 HO3 109.5 114.0
C5 C4 O4 110.5 109.5
O4 C4 H4 110.5 109.5
C4 O4 HO4 109.5 114.0
C4 C5 O5 106.9 109.4
C4 C5 C6 113.6 109.5
C5 C4 H4 109.2 109.6
C4 C5 H5 108.1 109.5
C6 C5 O5 110.8 109.5
O5 C5 H5 109.3 109.5
C5 C6 O6 108.3 109.5
C6 C5 H5 108.1 109.5
C5 C6 H6A 109.7 109.5
C5 C6 H6 109.8 109.5
O6 C6 H6A 109.8 109.4
O6 C6 H6 109.8 109.5
C6 O6 HO6 109.5 114.0
OAA CAR HAR 109.6 110.6
OAC CAU CAV 107.9 109.8
OAC CAU CBF 110.9 109.8
OAC CAW HAW 110.2 109.5
OAC CAW HAWA 110.1 109.5
OAD CAZ HAZ 109.8 110.3
OAF CAS HAS 109.3 110.4
OAG CAT HAT 111.4 110.8
OAH CAV HAV 110.8 110.7
OAI CAX HAX 111.1 111.0
OAJ CBA HBA 108.9 109.4
OAJ CBA HBAA 108.9 109.5
OAN CBF HBF 109.0 109.5
OAN CBF HBFA 109.0 109.5
OAO CBG HBG 109.4 109.4
OAO CBG HBGA 109.4 109.5
CAQ CAS CAT 106.0 104.2
CAQ CAS HAS 108.0 110.5
CAQ CBA HBA 108.9 109.5
CAQ CBA HBAA 108.9 109.5
CAR CAT HAT 110.1 111.0
CAW CAR HAR 108.4 110.7
CAR CAW HAW 110.2 109.5
CAR CAW HAWA 110.2 109.4
CAT CAS HAS 108.2 110.6
CAS CAT HAT 110.0 111.0
CAU CAV CAX 105.3 102.3
CAU CAV HAV 109.5 110.9
CAU CBF HBF 109.0 109.5
CAU CBF HBFA 109.0 109.5
CAV CAX CAZ 105.2 100.9
CAX CAV HAV 109.5 111.0
CAV CAX HAX 109.9 111.1
CAX CAZ CBG 112.1 110.3
CAZ CAX HAX 109.8 111.2
CAX CAZ HAZ 108.6 110.3
CBG CAZ HAZ 108.6 110.4
CAZ CBG HBG 109.4 109.5
CAZ CBG HBGA 109.3 109.5
H6 C6 H6A 109.5 109.4
HAW CAW HAWA 109.5 109.5
HBA CBA HBAA 109.5 109.4
HBF CBF HBFA 109.4 109.4
HBG CBG HBGA 109.4 109.4

Torsion Angles for 045

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O5 O1 233.8 240.0
O5 C1 O1 CAQ 123.6 80.7
O1 C1 O5 H1 243.1 240.0
O5 C1 C2 C3 26.1 57.7
O5 C1 C2 O2 149.3 177.5
C2 C1 O5 H1 116.9 120.0
O5 C1 C2 H2 266.4 297.7
C4 C5 O5 C1 72.4 61.2
C6 C5 O5 C1 196.7 181.1
C1 O5 C5 H5 315.7 301.2
C2 C1 O1 O5 125.6 119.9
O1 C1 O5 C5 75.2 58.8
O5 C1 O1 H1 116.9 120.0
O1 C1 C2 C3 262.1 297.7
O1 C1 C2 O2 25.2 57.5
C2 C1 O1 H1 242.5 239.9
O1 C1 C2 H2 142.3 177.7
O5 C1 C2 O1 124.1 120.0
C2 C1 O5 C5 309.1 298.8
O5 C1 C2 H1 242.3 240.0
C2 C1 O1 CAQ 249.2 200.6
O1 C1 C2 H1 118.2 120.1
C3 C2 C1 O2 236.9 240.2
C1 C2 C3 C4 335.4 303.0
C1 C2 C3 O3 212.7 183.1
C3 C2 C1 H2 119.8 120.0
C1 C2 C3 H3 95.0 62.8
O2 C2 C1 H2 242.9 239.8
C1 C2 O2 HO2 180.0 60.1
CAQ O1 C1 H1 6.7 320.6
O1 CAQ CAS HAS 234.4 240.3
O1 CAQ CBA HBA 73.0 173.9
O1 CAQ CBA HBAA 313.7 53.9
C3 C2 C1 O5 26.1 57.7
C3 C2 C1 O1 262.1 297.7
C1 C2 C3 O2 124.2 119.8
C3 C2 C1 H1 143.9 177.6
C1 C2 C3 H2 240.3 240.0
O2 C2 C3 H2 116.1 120.2
C3 C2 O2 HO2 308.6 179.7
C4 C3 C2 O3 122.7 119.9
C2 C3 C4 O4 163.4 176.9
C2 C3 C4 C5 43.0 57.0
C4 C3 C2 H3 240.4 240.2
C2 C3 C4 H4 284.1 297.0
O3 C3 C2 H3 117.7 120.3
C2 C3 O3 HO3 180.0 300.0
O2 C2 C1 O5 149.3 177.5
O2 C2 C1 O1 25.2 57.5
C1 C2 O2 C3 231.5 240.4
O2 C2 C1 H1 267.0 297.5
C1 C2 O2 H2 116.2 120.2
O2 C2 C3 C4 211.3 183.2
O2 C2 C3 O3 88.6 63.3
C3 C2 O2 H2 244.8 239.8
O2 C2 C3 H3 330.9 303.0
C4 C3 C2 O2 211.3 183.2
C2 C3 C4 O3 237.2 240.1
C4 C3 C2 H2 95.2 63.0
C2 C3 C4 H3 119.5 119.8
O3 C3 C4 H3 242.3 239.7
C4 C3 O3 HO3 53.7 180.5
C5 C4 C3 O4 239.6 240.1
O4 C4 C3 H4 239.3 239.9
C3 C4 O4 HO4 180.0 60.0
C3 C4 C5 O5 294.6 302.4
C3 C4 C5 C6 172.1 182.4
C5 C4 C3 H4 118.9 120.0
C3 C4 C5 H5 52.1 62.4
O3 C3 C2 O2 88.6 63.3
C2 C3 O3 C4 126.3 119.5
O3 C3 C2 H2 332.4 303.1
C2 C3 O3 H3 243.2 239.7
O3 C3 C4 O4 286.2 296.7
O3 C3 C4 C5 165.8 176.9
C4 C3 O3 H3 116.9 120.2
O3 C3 C4 H4 46.9 56.9
O4 C4 C3 O3 286.2 296.7
C3 C4 O4 C5 240.8 240.3
O4 C4 C3 H3 43.9 57.0
C3 C4 O4 H4 119.8 120.1
O4 C4 C5 O5 175.2 182.5
O4 C4 C5 C6 52.7 62.5
C5 C4 O4 H4 239.0 239.8
O4 C4 C5 H5 292.7 302.5
C1 O5 C5 C4 72.4 61.2
C5 C4 C3 O3 165.8 176.9
C3 C4 C5 O4 119.4 119.9
C5 C4 C3 H3 283.5 297.1
C3 C4 C5 H4 241.1 240.1
O4 C4 C5 H4 121.7 120.2
C5 C4 O4 HO4 299.2 179.7
C6 C5 C4 O5 237.5 240.1
O5 C5 C4 H5 242.4 240.0
C4 C5 C6 O6 240.2 183.8
C6 C5 C4 H5 120.0 120.0
C4 C5 C6 H6A 0.1 303.8
C4 C5 C6 H6 120.4 63.7
C5 O5 C1 O1 75.2 58.8
C5 O5 C1 H1 192.1 178.8
O5 C5 C4 O4 175.2 182.5
C4 C5 O5 C6 235.7 240.1
O5 C5 C4 H4 53.4 62.3
C4 C5 O5 H5 116.7 120.0
O5 C5 C6 O6 119.9 63.8
C6 C5 O5 H5 241.0 240.0
O5 C5 C6 H6A 239.7 183.8
O5 C5 C6 H6 0.1 303.8
C1 O5 C5 C6 196.7 181.1
C6 C5 C4 O4 52.7 62.5
C4 C5 C6 O5 120.3 119.9
C6 C5 C4 H4 290.9 302.3
C4 C5 C6 H5 240.0 240.0
O5 C5 C6 H5 119.7 120.0
O6 C6 C5 H6A 240.2 240.0
O6 C6 C5 H6 119.8 120.0
C5 C6 O6 HO6 180.0 175.0
H6 C6 C5 H6A 120.3 120.0
O6 C6 C5 O5 119.9 63.8
O6 C6 C5 H5 0.2 303.8
C5 C6 O6 H6A 119.8 120.0
C5 C6 O6 H6 240.2 240.0
H6 C6 O6 H6A 239.6 240.1
OAA CAQ CAS HAS 110.4 120.8
OAA CAQ CBA HBA 192.4 294.9
OAA CAQ CBA HBAA 73.1 174.9
OAA CAR CAT HAT 96.6 81.2
CAW CAR OAA HAR 240.4 237.0
OAA CAR CAW HAW 313.4 304.2
OAA CAR CAW HAWA 192.5 184.3
CAU OAC CAW HAW 341.8 297.3
CAU OAC CAW HAWA 102.7 57.3
OAC CAU CAV CAX 96.0 98.2
OAC CAU CAV HAV 213.6 216.5
OAC CAU CBF HBF 95.4 172.7
OAC CAU CBF HBFA 336.0 52.8
OAC CAW CAR HAR 312.7 301.3
CAR CAW OAC HAW 240.4 240.0
CAR CAW OAC HAWA 119.5 120.0
HAW CAW OAC HAWA 239.1 240.0
OAD CAZ CAX HAX 106.9 81.5
CAX CAZ OAD HAZ 117.8 118.9
CBG CAZ OAD HAZ 240.3 237.8
OAD CAZ CBG HBG 36.9 306.5
OAD CAZ CBG HBGA 277.1 186.5
OAD CAU CAV HAV 96.4 97.0
OAD CAU CBF HBF 218.4 293.6
OAD CAU CBF HBFA 98.9 173.7
CAQ CAS OAF HAS 238.8 237.5
CAT CAS OAF HAS 119.1 122.7
OAF CAS CAT HAT 22.6 21.3
CAR CAT OAG HAT 238.3 236.4
OAG CAT CAS HAS 18.4 20.3
CAS CAT OAG HAT 123.2 123.7
CAU CAV OAH HAV 238.4 236.5
CAX CAV OAH HAV 121.9 123.6
OAH CAV CAX HAX 21.2 34.4
OAI CAX CAV HAV 21.2 33.7
CAV CAX OAI HAX 121.9 124.2
CAZ CAX OAI HAX 237.7 235.8
OAI CAX CAZ HAZ 348.5 324.6
CAQ CBA OAJ HBA 239.7 240.0
CAQ CBA OAJ HBAA 120.4 120.0
HBA CBA OAJ HBAA 240.7 240.1
CAU CBF OAN HBF 239.7 239.9
CAU CBF OAN HBFA 120.3 120.0
HBF CBF OAN HBFA 240.6 240.0
OAO CBG CAZ HAZ 36.6 304.3
CAZ CBG OAO HBG 239.9 240.0
CAZ CBG OAO HBGA 120.1 120.0
HBG CBG OAO HBGA 240.2 240.1
C1 O1 CAQ CAS 290.5 67.8
OAF CAS CAQ HAS 121.9 122.5
CAS CAQ CBA HBA 309.1 52.8
CAS CAQ CBA HBAA 189.8 292.8
CAT CAS CAQ HAS 244.2 241.1
CAQ CAS CAT HAT 258.0 262.7
C1 O1 CAQ CBA 170.0 306.6
OAJ CBA CAQ HBA 120.3 120.0
OAJ CBA CAQ HBAA 239.6 240.0
HBA CBA CAQ HBAA 119.3 120.0
OAG CAT CAR HAT 122.6 123.5
CAR CAT CAS HAS 260.6 262.2
CAS CAT CAR HAT 241.8 241.7
OAA CAR CAW HAR 120.3 122.9
OAC CAW CAR HAW 119.6 120.0
OAC CAW CAR HAWA 240.5 240.0
CAW CAR CAT HAT 334.6 322.7
HAW CAW CAR HAWA 120.9 120.0
OAF CAS CAT HAS 240.2 237.4
OAG CAT CAS HAT 236.0 236.4
CAQ CAS CAT HAS 115.6 118.8
CAR CAT CAS HAT 118.2 118.3
OAC CAU CAV CBF 239.3 239.1
OAH CAV CAU HAV 122.3 123.4
CAV CAU CBF HBF 336.5 51.8
CAV CAU CBF HBFA 217.1 291.9
CAU CAV CAX CAZ 19.7 34.1
CAX CAV CAU HAV 242.3 241.6
CAU CAV CAX HAX 261.5 276.2
OAC CAU CBF CAV 118.9 120.9
OAN CBF CAU HBF 120.3 120.1
OAN CBF CAU HBFA 239.7 240.0
HBF CBF CAU HBFA 119.4 119.9
OAH CAV CAX HAV 237.3 236.5
OAI CAX CAV HAX 237.4 235.9
CAU CAV CAX HAV 117.6 118.3
CAV CAX CAZ CBG 227.2 204.7
CAZ CAX CAV HAX 118.2 118.0
CAV CAX CAZ HAZ 107.3 82.5
OAD CAZ CAX HAZ 241.4 241.1
OAI CAX CAZ HAX 123.0 124.1
CAZ CAX CAV HAV 262.0 275.9
CAV CAX CAZ HAX 241.8 242.0
CBG CAZ CAX HAZ 119.9 122.2
CAX CAZ CBG HBG 156.5 62.1
CAX CAZ CBG HBGA 36.7 302.1
OAD CAZ CBG HAZ 120.4 122.2
OAO CBG CAZ HBG 120.1 120.0
OAO CBG CAZ HBGA 239.9 240.0
CBG CAZ CAX HAX 345.4 322.6
CAX CAZ CBG HAZ 240.1 237.8
HBG CBG CAZ HBGA 119.8 120.0
O5 C1 H1 O1 242.1 240.0
C2 C1 H1 O5 239.5 240.1
H1 C1 O5 C5 192.1 178.8
C2 C1 H1 O1 121.6 120.1
H1 C1 O1 CAQ 6.7 320.6
H1 C1 C2 C3 143.9 177.6
H1 C1 C2 O2 267.0 297.5
H1 C1 C2 H2 24.1 57.7
H2 C2 C1 O5 266.4 297.7
H2 C2 C1 O1 142.3 177.7
C1 C2 H2 C3 126.2 119.7
C1 C2 H2 O2 241.9 239.9
H2 C2 C1 H1 24.1 57.7
C3 C2 H2 O2 115.7 120.1
H2 C2 C3 C4 95.2 63.0
H2 C2 C3 O3 332.4 303.1
H2 C2 C3 H3 214.8 182.8
H2 C2 O2 HO2 63.8 299.9
HO2 O2 C2 H2 63.8 299.9
H3 C3 C2 O2 330.9 303.0
C2 C3 H3 C4 235.7 240.5
C2 C3 H3 O3 117.9 120.3
H3 C3 C2 H2 214.8 182.8
C4 C3 H3 O3 242.2 239.8
H3 C3 C4 O4 43.9 57.0
H3 C3 C4 C5 283.5 297.1
H3 C3 C4 H4 164.5 177.2
H3 C3 O3 HO3 296.8 60.2
HO3 O3 C3 H3 296.8 60.2
H4 C4 C3 O3 46.9 56.9
C3 C4 H4 O4 240.3 239.9
C3 C4 H4 C5 118.5 119.7
H4 C4 C3 H3 164.5 177.2
C5 C4 H4 O4 121.7 120.2
H4 C4 O4 HO4 60.2 299.9
H4 C4 C5 O5 53.4 62.3
H4 C4 C5 C6 290.9 302.3
H4 C4 C5 H5 171.0 182.3
HO4 O4 C4 H4 60.2 299.9
H5 C5 C4 O4 292.7 302.5
C4 C5 H5 O5 244.0 240.0
C4 C5 H5 C6 123.4 120.0
H5 C5 C4 H4 171.0 182.3
C6 C5 H5 O5 120.6 120.0
H5 C5 C6 O6 0.2 303.8
H5 C5 C6 H6A 120.0 63.8
H5 C5 C6 H6 240.4 183.8
H6A C6 C5 O5 239.7 183.8
C5 C6 H6A O6 241.1 240.0
H6A C6 C5 H5 120.0 63.8
C5 C6 H6A H6 120.5 120.0
O6 C6 H6A H6 239.5 240.1
H6A C6 O6 HO6 60.2 55.0
H6 C6 C5 O5 0.1 303.8
C5 C6 H6 O6 119.0 120.0
H6 C6 C5 H5 240.4 183.8
C5 C6 H6 H6A 239.5 240.0
O6 C6 H6 H6A 120.5 119.9
H6 C6 O6 HO6 299.9 295.0
HO6 O6 C6 H6A 60.2 55.0
HO6 O6 C6 H6 299.9 295.0
HOAF OAF CAS HAS 301.1 302.5
HOAG OAG CAT HAT 301.7 62.2
HOAH OAH CAV HAV 301.6 303.5
HOAI OAI CAX HAX 58.1 55.8
HOAJ OAJ CBA HBA 300.3 307.2
HOAJ OAJ CBA HBAA 59.6 67.2
HOAN OAN CBF HBF 300.3 300.1
HOAN OAN CBF HBFA 59.7 60.1
HOAO OAO CBG HBG 300.1 300.0
HOAO OAO CBG HBGA 59.9 59.9
HAR CAR CAT HAT 214.7 199.7
HAR CAR CAW HAW 193.1 181.3
HAR CAR CAW HAWA 72.2 61.3
CAQ CAS HAS CAT 245.7 245.1
HAS CAS CAT HAT 142.4 143.9
HAT CAT CAS HAS 142.4 143.9
CAU CAV HAV CAX 245.0 247.1
HAV CAV CAX CAZ 262.0 275.9
HAV CAV CAX HAX 143.9 157.9
OAC CAW HAW HAWA 121.3 120.1
HAW CAW CAR HAR 193.1 181.3
CAR CAW HAW HAWA 238.7 240.1
OAC CAW HAWA HAW 238.7 239.9
HAWA CAW CAR HAR 72.2 61.3
CAR CAW HAWA HAW 121.3 120.0
CAV CAX HAX CAZ 115.3 111.6
HAX CAX CAV HAV 143.9 157.9
HAX CAX CAZ CBG 345.4 322.6
HAX CAX CAZ HAZ 225.5 200.4
CAX CAZ HAZ CBG 122.1 122.2
HAZ CAZ CAX HAX 225.5 200.4
HAZ CAZ CBG HBG 276.5 184.3
HAZ CAZ CBG HBGA 156.7 64.3
OAJ CBA HBA HBAA 119.0 120.0
CAQ CBA HBA HBAA 241.0 240.0
OAJ CBA HBAA HBA 241.0 240.1
CAQ CBA HBAA HBA 119.0 120.0
OAN CBF HBF HBFA 119.2 120.0
CAU CBF HBF HBFA 240.8 240.0
OAN CBF HBFA HBF 240.8 240.0
CAU CBF HBFA HBF 119.2 120.0
OAO CBG HBG HBGA 119.8 120.0
HBG CBG CAZ HAZ 276.5 184.3
CAZ CBG HBG HBGA 240.3 240.0
OAO CBG HBGA HBG 240.2 240.1
HBGA CBG CAZ HAZ 156.7 64.3
CAZ CBG HBGA HBG 119.8 120.1