PDB Chemical Component 02Z
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 02Z
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C12 |
1.501 |
1.411 |
| C1 |
O21 |
1.240 |
1.218 |
| C1 |
N22 |
1.341 |
1.348 |
| N1 |
C13 |
1.367 |
1.314 |
| N1 |
C14 |
1.335 |
1.301 |
| S1 |
C12 |
1.695 |
1.761 |
| S1 |
C14 |
1.718 |
1.708 |
| N2 |
C13 |
1.334 |
1.387 |
| N3 |
C14 |
1.389 |
1.379 |
| N3 |
C15 |
1.376 |
1.398 |
| C12 |
C13 |
1.391 |
1.378 |
| C15 |
C16 |
1.537 |
1.389 |
| C15 |
C20 |
1.480 |
1.388 |
| C16 |
C17 |
1.427 |
1.381 |
| C17 |
C18 |
1.482 |
1.383 |
| C18 |
C19 |
1.486 |
1.383 |
| C19 |
C20 |
1.446 |
1.381 |
| N2 |
HN2 |
1.000 |
0.970 |
| N2 |
HN2A |
1.000 |
0.970 |
| N3 |
HN3 |
1.000 |
0.970 |
| C16 |
H16 |
1.080 |
1.080 |
| C17 |
H17 |
1.080 |
1.080 |
| C18 |
H18 |
1.080 |
1.080 |
| C19 |
H19 |
1.080 |
1.080 |
| C20 |
H20 |
1.081 |
1.080 |
| N22 |
HN22 |
1.000 |
0.970 |
| N22 |
HN2B |
1.000 |
0.970 |
Bond Angles for 02Z
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C12 |
C1 |
O21 |
121.3 |
120.0 |
| C12 |
C1 |
N22 |
116.3 |
120.0 |
| C1 |
C12 |
S1 |
122.5 |
126.1 |
| C1 |
C12 |
C13 |
126.8 |
126.1 |
| O21 |
C1 |
N22 |
122.3 |
120.0 |
| C1 |
N22 |
HN22 |
120.0 |
120.0 |
| C1 |
N22 |
HN2B |
120.0 |
120.0 |
| C13 |
N1 |
C14 |
111.1 |
117.3 |
| N1 |
C13 |
N2 |
121.5 |
123.2 |
| N1 |
C13 |
C12 |
114.1 |
113.7 |
| N1 |
C14 |
S1 |
114.0 |
110.8 |
| N1 |
C14 |
N3 |
120.9 |
124.6 |
| C12 |
S1 |
C14 |
90.2 |
90.5 |
| S1 |
C12 |
C13 |
110.6 |
107.7 |
| S1 |
C14 |
N3 |
125.1 |
124.6 |
| N2 |
C13 |
C12 |
124.4 |
123.1 |
| C13 |
N2 |
HN2 |
109.5 |
120.0 |
| C13 |
N2 |
HN2A |
109.5 |
120.1 |
| C14 |
N3 |
C15 |
130.4 |
120.0 |
| C14 |
N3 |
HN3 |
114.8 |
120.0 |
| N3 |
C15 |
C16 |
125.7 |
120.1 |
| N3 |
C15 |
C20 |
116.1 |
120.1 |
| C15 |
N3 |
HN3 |
114.8 |
120.0 |
| C16 |
C15 |
C20 |
118.1 |
119.9 |
| C15 |
C16 |
C17 |
121.4 |
119.9 |
| C15 |
C16 |
H16 |
119.3 |
120.0 |
| C15 |
C20 |
C19 |
120.0 |
119.9 |
| C15 |
C20 |
H20 |
120.0 |
120.1 |
| C16 |
C17 |
C18 |
119.0 |
120.1 |
| C17 |
C16 |
H16 |
119.3 |
120.0 |
| C16 |
C17 |
H17 |
120.5 |
120.0 |
| C17 |
C18 |
C19 |
120.6 |
120.1 |
| C18 |
C17 |
H17 |
120.4 |
119.9 |
| C17 |
C18 |
H18 |
119.7 |
120.0 |
| C18 |
C19 |
C20 |
120.8 |
120.1 |
| C19 |
C18 |
H18 |
119.7 |
119.9 |
| C18 |
C19 |
H19 |
119.6 |
119.9 |
| C20 |
C19 |
H19 |
119.6 |
120.0 |
| C19 |
C20 |
H20 |
120.0 |
120.0 |
| HN2 |
N2 |
HN2A |
109.5 |
120.0 |
| HN22 |
N22 |
HN2B |
120.0 |
120.1 |
Torsion Angles for 02Z
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O21 |
C1 |
C12 |
N22 |
179.5 |
180.3 |
| C12 |
C1 |
N22 |
HN22 |
179.5 |
0.0 |
| C12 |
C1 |
N22 |
HN2B |
359.5 |
180.0 |
| N1 |
C13 |
C12 |
C1 |
179.7 |
180.0 |
| C1 |
C12 |
S1 |
C14 |
180.3 |
180.0 |
| S1 |
C12 |
C1 |
C13 |
180.0 |
179.9 |
| N2 |
C13 |
C12 |
C1 |
359.8 |
359.9 |
| C12 |
C1 |
O21 |
N22 |
180.5 |
179.7 |
| O21 |
C1 |
C12 |
S1 |
180.3 |
180.0 |
| O21 |
C1 |
C12 |
C13 |
0.3 |
0.1 |
| O21 |
C1 |
N22 |
HN22 |
0.0 |
179.7 |
| O21 |
C1 |
N22 |
HN2B |
180.0 |
359.7 |
| C12 |
C1 |
N22 |
O21 |
179.5 |
180.3 |
| N22 |
C1 |
C12 |
S1 |
0.8 |
359.7 |
| N22 |
C1 |
C12 |
C13 |
180.7 |
179.8 |
| HN22 |
N22 |
C1 |
HN2B |
180.0 |
180.0 |
| C1 |
C12 |
C13 |
N1 |
179.7 |
180.0 |
| C13 |
N1 |
C14 |
S1 |
0.2 |
360.0 |
| C13 |
N1 |
C14 |
N3 |
178.8 |
180.0 |
| S1 |
C12 |
C13 |
N1 |
359.7 |
0.0 |
| N2 |
C13 |
N1 |
C12 |
179.9 |
180.0 |
| N1 |
C13 |
N2 |
HN2 |
0.0 |
360.0 |
| N1 |
C13 |
N2 |
HN2A |
120.0 |
180.0 |
| C14 |
N1 |
C13 |
N2 |
179.9 |
180.0 |
| C14 |
N1 |
C13 |
C12 |
0.1 |
360.0 |
| C12 |
S1 |
C14 |
N1 |
359.6 |
0.0 |
| S1 |
C14 |
N1 |
N3 |
181.5 |
180.0 |
| N1 |
C14 |
N3 |
C15 |
164.4 |
354.1 |
| N1 |
C14 |
N3 |
HN3 |
344.4 |
174.1 |
| S1 |
C12 |
C1 |
O21 |
180.3 |
180.0 |
| S1 |
C12 |
C1 |
N22 |
0.8 |
359.7 |
| C1 |
C12 |
S1 |
C13 |
180.0 |
180.1 |
| N1 |
C13 |
C12 |
S1 |
359.7 |
0.0 |
| N1 |
C14 |
S1 |
C12 |
359.6 |
0.0 |
| C12 |
S1 |
C14 |
N3 |
181.2 |
180.0 |
| N2 |
C13 |
C12 |
S1 |
179.8 |
180.0 |
| N1 |
C14 |
S1 |
N3 |
178.5 |
180.0 |
| C14 |
S1 |
C12 |
C13 |
0.4 |
360.0 |
| S1 |
C14 |
N3 |
C15 |
342.8 |
174.1 |
| S1 |
C14 |
N3 |
HN3 |
162.8 |
354.2 |
| C1 |
C12 |
C13 |
N2 |
359.8 |
359.9 |
| N2 |
C13 |
N1 |
C14 |
179.9 |
180.0 |
| N1 |
C13 |
N2 |
C12 |
180.1 |
180.0 |
| S1 |
C12 |
C13 |
N2 |
179.8 |
180.0 |
| HN2 |
N2 |
C13 |
HN2A |
240.0 |
180.0 |
| N1 |
C14 |
N3 |
S1 |
181.6 |
180.0 |
| C14 |
N3 |
C15 |
C16 |
358.5 |
149.5 |
| C14 |
N3 |
C15 |
C20 |
177.6 |
329.2 |
| C15 |
N3 |
C14 |
HN3 |
180.0 |
179.9 |
| C14 |
N3 |
C15 |
HN3 |
180.0 |
180.1 |
| C16 |
C15 |
N3 |
C20 |
180.8 |
180.3 |
| N3 |
C15 |
C16 |
C17 |
179.2 |
180.0 |
| N3 |
C15 |
C16 |
H16 |
359.2 |
360.0 |
| N3 |
C15 |
C20 |
C19 |
181.0 |
179.7 |
| N3 |
C15 |
C20 |
H20 |
1.0 |
360.0 |
| C13 |
C12 |
C1 |
O21 |
0.3 |
0.1 |
| C13 |
C12 |
C1 |
N22 |
180.7 |
179.8 |
| C1 |
C12 |
C13 |
S1 |
180.0 |
179.9 |
| C12 |
C13 |
N1 |
C14 |
0.1 |
360.0 |
| N1 |
C13 |
C12 |
N2 |
179.9 |
180.0 |
| C13 |
C12 |
S1 |
C14 |
0.4 |
360.0 |
| C12 |
C13 |
N2 |
HN2 |
179.9 |
180.0 |
| C12 |
C13 |
N2 |
HN2A |
299.9 |
0.0 |
| N3 |
C15 |
C16 |
C20 |
179.2 |
179.7 |
| C16 |
C15 |
N3 |
HN3 |
178.4 |
329.5 |
| C16 |
C15 |
C20 |
C19 |
0.3 |
359.4 |
| C16 |
C15 |
C20 |
H20 |
180.3 |
179.7 |
| C15 |
C16 |
C17 |
C18 |
359.7 |
0.0 |
| C17 |
C16 |
C15 |
H16 |
180.0 |
180.0 |
| C15 |
C16 |
C17 |
H17 |
179.7 |
180.0 |
| N3 |
C15 |
C20 |
C16 |
180.8 |
180.3 |
| C20 |
C15 |
N3 |
HN3 |
357.6 |
149.2 |
| C20 |
C15 |
C16 |
C17 |
0.0 |
0.3 |
| C20 |
C15 |
C16 |
H16 |
180.0 |
180.2 |
| C18 |
C19 |
C20 |
C15 |
359.7 |
0.6 |
| C15 |
C20 |
C19 |
H19 |
179.7 |
180.3 |
| C19 |
C20 |
C15 |
H20 |
180.0 |
179.7 |
| C17 |
C16 |
C15 |
C20 |
0.0 |
0.3 |
| C15 |
C16 |
C17 |
H16 |
180.0 |
180.0 |
| C16 |
C17 |
C18 |
C19 |
0.2 |
360.0 |
| C18 |
C17 |
C16 |
H17 |
180.0 |
180.0 |
| C16 |
C17 |
C18 |
H18 |
180.3 |
179.9 |
| C18 |
C17 |
C16 |
H16 |
179.7 |
180.0 |
| C16 |
C17 |
C18 |
H17 |
180.0 |
180.0 |
| C17 |
C18 |
C19 |
C20 |
0.1 |
359.7 |
| C19 |
C18 |
C17 |
H18 |
180.0 |
180.1 |
| C17 |
C18 |
C19 |
H19 |
180.0 |
180.0 |
| C15 |
C20 |
C19 |
C18 |
359.7 |
0.6 |
| C19 |
C18 |
C17 |
H17 |
180.2 |
180.0 |
| C17 |
C18 |
C19 |
H18 |
180.0 |
179.9 |
| C20 |
C19 |
C18 |
H19 |
180.0 |
179.7 |
| C18 |
C19 |
C20 |
H20 |
179.7 |
180.3 |
| C15 |
C20 |
C19 |
H20 |
180.0 |
180.3 |
| C20 |
C19 |
C18 |
H18 |
180.0 |
179.8 |
| C18 |
C19 |
C20 |
H19 |
180.0 |
180.3 |
| HN2 |
N2 |
C13 |
C12 |
179.9 |
180.0 |
| C13 |
N2 |
HN2 |
HN2A |
120.0 |
180.0 |
| HN2A |
N2 |
C13 |
C12 |
299.9 |
0.0 |
| C13 |
N2 |
HN2A |
HN2 |
240.0 |
180.0 |
| C14 |
N3 |
HN3 |
C15 |
180.0 |
179.9 |
| HN3 |
N3 |
C15 |
C16 |
178.4 |
329.5 |
| HN3 |
N3 |
C15 |
C20 |
357.6 |
149.2 |
| H16 |
C16 |
C15 |
C20 |
180.0 |
180.2 |
| C15 |
C16 |
H16 |
C17 |
180.0 |
180.0 |
| H16 |
C16 |
C17 |
C18 |
179.7 |
180.0 |
| H16 |
C16 |
C17 |
H17 |
359.8 |
360.0 |
| C16 |
C17 |
H17 |
C18 |
180.0 |
180.0 |
| H17 |
C17 |
C16 |
H16 |
359.8 |
360.0 |
| H17 |
C17 |
C18 |
C19 |
180.2 |
180.0 |
| H17 |
C17 |
C18 |
H18 |
0.2 |
360.0 |
| C17 |
C18 |
H18 |
C19 |
180.0 |
180.1 |
| H18 |
C18 |
C17 |
H17 |
0.2 |
360.0 |
| H18 |
C18 |
C19 |
C20 |
180.0 |
179.8 |
| H18 |
C18 |
C19 |
H19 |
0.0 |
0.1 |
| C18 |
C19 |
H19 |
C20 |
180.0 |
179.7 |
| H19 |
C19 |
C18 |
H18 |
0.0 |
0.1 |
| H19 |
C19 |
C20 |
H20 |
359.7 |
0.0 |
| C15 |
C20 |
H20 |
C19 |
180.0 |
179.7 |
| H20 |
C20 |
C19 |
H19 |
359.7 |
0.0 |
| C1 |
N22 |
HN22 |
HN2B |
180.0 |
180.0 |
| C1 |
N22 |
HN2B |
HN22 |
180.0 |
180.0 |