PDB Chemical Component 027
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 027
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C3 |
N1 |
1.338 |
1.307 |
| N2 |
N1 |
1.409 |
1.394 |
| C4 |
N2 |
1.424 |
1.349 |
| N2 |
C19 |
1.468 |
1.465 |
| C6 |
C3 |
1.487 |
1.468 |
| C3 |
N8 |
1.360 |
1.392 |
| C5 |
C4 |
1.388 |
1.470 |
| O18 |
C4 |
1.257 |
1.218 |
| C13 |
C5 |
1.291 |
1.392 |
| C5 |
C6 |
1.488 |
1.413 |
| C16 |
C6 |
1.288 |
1.395 |
| N8 |
C7 |
1.362 |
1.399 |
| N11 |
C7 |
1.344 |
1.312 |
| C7 |
C9 |
1.326 |
1.405 |
| N8 |
HN8 |
1.000 |
0.970 |
| C9 |
C15 |
1.336 |
1.352 |
| C9 |
H9 |
1.080 |
1.080 |
| N11 |
N10 |
1.410 |
1.401 |
| N10 |
C15 |
1.344 |
1.350 |
| C22 |
N12 |
1.480 |
1.469 |
| N12 |
C21 |
1.478 |
1.470 |
| N12 |
C14 |
1.429 |
1.396 |
| C14 |
C13 |
1.365 |
1.385 |
| C13 |
H13 |
1.080 |
1.080 |
| C14 |
C20 |
1.368 |
1.394 |
| C15 |
C26 |
1.506 |
1.507 |
| C20 |
C16 |
1.386 |
1.366 |
| C16 |
H16 |
1.080 |
1.080 |
| C25 |
N17 |
1.473 |
1.469 |
| C23 |
N17 |
1.470 |
1.469 |
| N17 |
C24 |
1.470 |
1.470 |
| C19 |
C27 |
1.524 |
1.529 |
| C19 |
C28 |
1.525 |
1.531 |
| C19 |
H19 |
1.100 |
1.090 |
| C20 |
H20 |
1.080 |
1.080 |
| C24 |
C21 |
1.526 |
1.530 |
| C21 |
H21 |
1.100 |
1.090 |
| C21 |
H21A |
1.100 |
1.090 |
| C23 |
C22 |
1.528 |
1.530 |
| C22 |
H22 |
1.100 |
1.090 |
| C22 |
H22A |
1.100 |
1.090 |
| C23 |
H23 |
1.100 |
1.090 |
| C23 |
H23A |
1.100 |
1.090 |
| C24 |
H24 |
1.100 |
1.090 |
| C24 |
H24A |
1.100 |
1.090 |
| C25 |
H25 |
1.100 |
1.091 |
| C25 |
H25A |
1.100 |
1.090 |
| C25 |
H25B |
1.100 |
1.090 |
| C26 |
H26 |
1.100 |
1.090 |
| C26 |
H26A |
1.100 |
1.091 |
| C26 |
H26B |
1.101 |
1.090 |
| C27 |
H27 |
1.100 |
1.090 |
| C27 |
H27A |
1.100 |
1.090 |
| C27 |
H27B |
1.100 |
1.090 |
| C28 |
H28 |
1.100 |
1.090 |
| C28 |
H28A |
1.101 |
1.090 |
| C28 |
H28B |
1.100 |
1.090 |
| N10 |
HN10 |
0.999 |
0.971 |
Bond Angles for 027
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C4 |
N2 |
C19 |
119.6 |
119.1 |
| N2 |
C19 |
C27 |
109.7 |
109.5 |
| N2 |
C19 |
C28 |
110.9 |
109.4 |
| N2 |
C19 |
H19 |
109.0 |
109.5 |
| C6 |
C3 |
N8 |
119.3 |
120.1 |
| C3 |
N8 |
C7 |
127.8 |
120.0 |
| C3 |
N8 |
HN8 |
116.1 |
119.9 |
| N8 |
C7 |
C9 |
127.8 |
126.0 |
| C7 |
C9 |
C15 |
107.3 |
107.9 |
| C7 |
C9 |
H9 |
126.4 |
126.0 |
| C15 |
C9 |
H9 |
126.3 |
126.1 |
| C9 |
C15 |
N10 |
109.8 |
107.9 |
| C9 |
C15 |
C26 |
117.6 |
126.1 |
| N11 |
N10 |
C15 |
106.7 |
108.0 |
| N11 |
N10 |
HN10 |
126.7 |
126.0 |
| N10 |
C15 |
C26 |
132.6 |
126.1 |
| C15 |
N10 |
HN10 |
126.7 |
126.0 |
| C14 |
N12 |
C21 |
110.6 |
111.0 |
| N12 |
C21 |
H21 |
109.3 |
109.5 |
| N12 |
C21 |
H21A |
109.3 |
109.5 |
| N12 |
C14 |
C13 |
120.4 |
119.7 |
| N12 |
C14 |
C20 |
120.0 |
119.8 |
| C14 |
C13 |
H13 |
119.6 |
120.3 |
| C14 |
C20 |
C16 |
121.1 |
120.8 |
| C14 |
C20 |
H20 |
119.4 |
119.6 |
| C15 |
C26 |
H26 |
109.5 |
109.5 |
| C15 |
C26 |
H26A |
109.5 |
109.4 |
| C15 |
C26 |
H26B |
109.5 |
109.5 |
| C20 |
C16 |
H16 |
120.3 |
120.1 |
| C23 |
N17 |
C24 |
109.9 |
110.9 |
| N17 |
C24 |
C21 |
108.4 |
109.4 |
| N17 |
C24 |
H24 |
109.8 |
109.5 |
| N17 |
C24 |
H24A |
109.8 |
109.4 |
| C27 |
C19 |
C28 |
111.3 |
109.4 |
| C27 |
C19 |
H19 |
108.6 |
109.5 |
| C19 |
C27 |
H27 |
109.5 |
109.5 |
| C19 |
C27 |
H27A |
109.5 |
109.5 |
| C19 |
C27 |
H27B |
109.5 |
109.5 |
| C28 |
C19 |
H19 |
107.3 |
109.5 |
| C19 |
C28 |
H28 |
109.5 |
109.4 |
| C19 |
C28 |
H28A |
109.5 |
109.5 |
| C19 |
C28 |
H28B |
109.4 |
109.5 |
| C24 |
C21 |
H21 |
109.3 |
109.5 |
| C24 |
C21 |
H21A |
109.3 |
109.5 |
| H21 |
C21 |
H21A |
109.7 |
109.5 |
| C23 |
C22 |
H22 |
108.7 |
109.5 |
| C23 |
C22 |
H22A |
108.7 |
109.5 |
| H22 |
C22 |
H22A |
110.2 |
109.5 |
| H23 |
C23 |
H23A |
109.5 |
109.5 |
| H24 |
C24 |
H24A |
109.2 |
109.5 |
| H25 |
C25 |
H25A |
109.5 |
109.4 |
| H25 |
C25 |
H25B |
109.5 |
109.5 |
| H25A |
C25 |
H25B |
109.5 |
109.5 |
| H26 |
C26 |
H26A |
109.4 |
109.5 |
| H26 |
C26 |
H26B |
109.5 |
109.5 |
| H26A |
C26 |
H26B |
109.5 |
109.4 |
| H27 |
C27 |
H27A |
109.4 |
109.4 |
| H27 |
C27 |
H27B |
109.5 |
109.5 |
| H27A |
C27 |
H27B |
109.5 |
109.4 |
| H28 |
C28 |
H28A |
109.5 |
109.5 |
| H28 |
C28 |
H28B |
109.5 |
109.5 |
| H28A |
C28 |
H28B |
109.5 |
109.5 |
Torsion Angles for 027
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C4 |
N2 |
C19 |
C27 |
110.2 |
120.0 |
| C4 |
N2 |
C19 |
C28 |
233.5 |
239.9 |
| C4 |
N2 |
C19 |
H19 |
351.5 |
359.9 |
| C27 |
C19 |
N2 |
C28 |
236.7 |
240.0 |
| C27 |
C19 |
N2 |
H19 |
118.8 |
120.1 |
| N2 |
C19 |
C27 |
H27 |
180.0 |
60.0 |
| N2 |
C19 |
C27 |
H27A |
300.0 |
180.0 |
| N2 |
C19 |
C27 |
H27B |
60.0 |
299.9 |
| C28 |
C19 |
N2 |
H19 |
242.1 |
240.0 |
| N2 |
C19 |
C28 |
H28 |
180.0 |
180.0 |
| N2 |
C19 |
C28 |
H28A |
300.0 |
300.0 |
| N2 |
C19 |
C28 |
H28B |
60.0 |
60.0 |
| C6 |
C3 |
N8 |
C7 |
191.9 |
180.0 |
| C6 |
C3 |
N8 |
HN8 |
11.9 |
0.1 |
| C3 |
N8 |
C7 |
C9 |
348.0 |
360.0 |
| C5 |
C4 |
N2 |
C19 |
180.2 |
180.0 |
| O18 |
C4 |
N2 |
C19 |
0.2 |
0.0 |
| C5 |
C6 |
C3 |
N8 |
180.1 |
180.0 |
| C3 |
N8 |
C7 |
HN8 |
180.0 |
180.1 |
| N8 |
C7 |
C9 |
C15 |
180.2 |
180.0 |
| N8 |
C7 |
C9 |
H9 |
0.2 |
0.1 |
| N11 |
C7 |
C9 |
C15 |
359.4 |
0.2 |
| N11 |
C7 |
C9 |
H9 |
179.4 |
180.3 |
| C15 |
C9 |
C7 |
H9 |
180.0 |
179.9 |
| C7 |
C9 |
C15 |
N10 |
0.3 |
359.6 |
| C7 |
C9 |
C15 |
C26 |
180.0 |
180.0 |
| C3 |
N8 |
HN8 |
C7 |
180.0 |
179.9 |
| HN8 |
N8 |
C7 |
C9 |
168.0 |
179.9 |
| C7 |
C9 |
C15 |
H9 |
180.0 |
180.1 |
| N11 |
N10 |
C15 |
C9 |
0.0 |
0.4 |
| N10 |
C15 |
C9 |
C26 |
180.3 |
179.6 |
| C9 |
C15 |
N10 |
HN10 |
180.0 |
180.0 |
| C9 |
C15 |
C26 |
H26 |
90.2 |
90.0 |
| C9 |
C15 |
C26 |
H26A |
210.1 |
210.0 |
| C9 |
C15 |
C26 |
H26B |
330.1 |
330.0 |
| C7 |
C9 |
H9 |
C15 |
180.0 |
179.9 |
| H9 |
C9 |
C15 |
N10 |
180.4 |
179.6 |
| H9 |
C9 |
C15 |
C26 |
0.0 |
359.9 |
| C9 |
C15 |
N10 |
N11 |
0.0 |
0.4 |
| N11 |
N10 |
C15 |
C26 |
180.4 |
180.0 |
| C15 |
N10 |
N11 |
HN10 |
180.0 |
179.7 |
| N10 |
C15 |
C9 |
H9 |
180.4 |
179.6 |
| C9 |
C15 |
N10 |
C26 |
179.6 |
180.4 |
| N11 |
N10 |
C15 |
HN10 |
180.0 |
180.3 |
| N10 |
C15 |
C26 |
H26 |
269.8 |
270.5 |
| N10 |
C15 |
C26 |
H26A |
29.7 |
30.5 |
| N10 |
C15 |
C26 |
H26B |
149.7 |
150.4 |
| C22 |
N12 |
C21 |
H21 |
62.6 |
60.6 |
| C22 |
N12 |
C21 |
H21A |
182.7 |
180.7 |
| C21 |
N12 |
C14 |
C13 |
329.5 |
180.0 |
| C21 |
N12 |
C14 |
C20 |
150.0 |
359.9 |
| N17 |
C24 |
C21 |
N12 |
61.5 |
58.4 |
| C24 |
C21 |
N12 |
H21 |
240.0 |
240.0 |
| C24 |
C21 |
N12 |
H21A |
120.0 |
120.0 |
| H21 |
C21 |
N12 |
H21A |
240.0 |
239.9 |
| C14 |
N12 |
C21 |
H21 |
300.2 |
296.8 |
| C14 |
N12 |
C21 |
H21A |
60.3 |
56.9 |
| N12 |
C14 |
C13 |
H13 |
0.1 |
360.0 |
| N12 |
C14 |
C20 |
C16 |
179.8 |
180.0 |
| N12 |
C14 |
C20 |
H20 |
359.8 |
0.1 |
| C13 |
C14 |
N12 |
C21 |
329.5 |
180.0 |
| N12 |
C14 |
C13 |
C20 |
180.5 |
179.9 |
| C20 |
C14 |
N12 |
C21 |
150.0 |
359.9 |
| N12 |
C14 |
C20 |
C13 |
179.5 |
180.1 |
| C20 |
C14 |
C13 |
H13 |
179.6 |
180.1 |
| C14 |
C20 |
C16 |
H16 |
179.9 |
180.1 |
| C26 |
C15 |
C9 |
H9 |
0.0 |
359.9 |
| C9 |
C15 |
C26 |
N10 |
180.4 |
179.6 |
| C26 |
C15 |
N10 |
HN10 |
0.4 |
359.7 |
| H26 |
C26 |
C15 |
H26A |
240.1 |
240.0 |
| H26 |
C26 |
C15 |
H26B |
120.0 |
120.1 |
| H26A |
C26 |
C15 |
H26B |
240.0 |
240.1 |
| C14 |
C20 |
C16 |
H20 |
180.0 |
180.1 |
| C25 |
N17 |
C24 |
H24 |
296.8 |
296.8 |
| C25 |
N17 |
C24 |
H24A |
56.8 |
56.8 |
| C23 |
N17 |
C24 |
C21 |
297.2 |
300.7 |
| C23 |
N17 |
C24 |
H24 |
57.2 |
60.6 |
| C23 |
N17 |
C24 |
H24A |
177.3 |
180.7 |
| N17 |
C24 |
C21 |
H21 |
301.5 |
298.5 |
| N17 |
C24 |
C21 |
H21A |
181.5 |
178.4 |
| H24 |
C24 |
N17 |
H24A |
239.9 |
239.9 |
| N2 |
C19 |
C27 |
C28 |
123.1 |
120.0 |
| N2 |
C19 |
C27 |
H19 |
241.0 |
240.0 |
| C28 |
C19 |
C27 |
H19 |
117.9 |
120.0 |
| C27 |
C19 |
C28 |
H28 |
302.4 |
300.0 |
| C27 |
C19 |
C28 |
H28A |
62.4 |
60.0 |
| C27 |
C19 |
C28 |
H28B |
182.4 |
180.0 |
| H27 |
C27 |
C19 |
H27A |
240.0 |
240.0 |
| H27 |
C27 |
C19 |
H27B |
120.0 |
120.0 |
| H27A |
C27 |
C19 |
H27B |
240.0 |
240.0 |
| N2 |
C19 |
C28 |
C27 |
237.6 |
240.0 |
| N2 |
C19 |
C28 |
H19 |
118.9 |
120.0 |
| C27 |
C19 |
C28 |
H19 |
241.3 |
240.0 |
| C28 |
C19 |
C27 |
H27 |
56.9 |
300.0 |
| C28 |
C19 |
C27 |
H27A |
176.9 |
60.0 |
| C28 |
C19 |
C27 |
H27B |
296.9 |
180.0 |
| H28 |
C28 |
C19 |
H28A |
240.0 |
240.0 |
| H28 |
C28 |
C19 |
H28B |
120.0 |
120.0 |
| H28A |
C28 |
C19 |
H28B |
240.0 |
240.0 |
| N2 |
C19 |
H19 |
C27 |
119.4 |
120.0 |
| N2 |
C19 |
H19 |
C28 |
239.8 |
240.0 |
| C27 |
C19 |
H19 |
C28 |
120.4 |
120.0 |
| H19 |
C19 |
C27 |
H27 |
299.0 |
180.0 |
| H19 |
C19 |
C27 |
H27A |
59.0 |
300.0 |
| H19 |
C19 |
C27 |
H27B |
179.0 |
60.0 |
| H19 |
C19 |
C28 |
H28 |
61.1 |
60.0 |
| H19 |
C19 |
C28 |
H28A |
181.1 |
180.0 |
| H19 |
C19 |
C28 |
H28B |
301.1 |
300.0 |
| C14 |
C20 |
H20 |
C16 |
180.0 |
179.9 |
| H20 |
C20 |
C16 |
H16 |
359.9 |
360.0 |
| N12 |
C21 |
C24 |
H21 |
120.0 |
120.0 |
| N12 |
C21 |
C24 |
H21A |
240.0 |
240.0 |
| N17 |
C24 |
C21 |
H24 |
120.0 |
120.0 |
| N17 |
C24 |
C21 |
H24A |
240.0 |
240.1 |
| H21 |
C21 |
C24 |
H21A |
120.0 |
120.1 |
| N12 |
C21 |
H21 |
H21A |
119.8 |
120.1 |
| C24 |
C21 |
H21 |
H21A |
240.2 |
239.9 |
| N12 |
C21 |
H21A |
H21 |
240.2 |
239.9 |
| C24 |
C21 |
H21A |
H21 |
119.8 |
120.1 |
| C22 |
C23 |
N17 |
C24 |
59.7 |
59.3 |
| H22 |
C22 |
C23 |
H22A |
120.0 |
120.0 |
| C23 |
C22 |
H22 |
H22A |
240.9 |
240.0 |
| C23 |
C22 |
H22A |
H22 |
119.1 |
120.0 |
| H23 |
C23 |
N17 |
C24 |
179.7 |
179.3 |
| H23 |
C23 |
C22 |
H22 |
64.5 |
61.6 |
| H23 |
C23 |
C22 |
H22A |
304.5 |
301.7 |
| H23A |
C23 |
N17 |
C24 |
299.7 |
299.4 |
| H23A |
C23 |
C22 |
H22 |
304.5 |
301.5 |
| H23A |
C23 |
C22 |
H22A |
184.5 |
181.6 |
| N17 |
C24 |
H24 |
C21 |
240.9 |
240.1 |
| N17 |
C24 |
H24 |
H24A |
120.5 |
120.0 |
| H24 |
C24 |
C21 |
H21 |
181.5 |
178.5 |
| H24 |
C24 |
C21 |
H21A |
61.5 |
58.4 |
| N17 |
C24 |
H24A |
C21 |
119.1 |
119.9 |
| N17 |
C24 |
H24A |
H24 |
239.5 |
240.0 |
| H24A |
C24 |
C21 |
H21 |
61.5 |
58.4 |
| H24A |
C24 |
C21 |
H21A |
301.5 |
298.3 |
| H25A |
C25 |
H25 |
H25B |
120.0 |
120.0 |
| H25 |
C25 |
H25A |
H25B |
240.0 |
240.0 |
| H25 |
C25 |
H25B |
H25A |
120.0 |
120.0 |
| C15 |
C26 |
H26 |
H26A |
120.0 |
120.0 |
| C15 |
C26 |
H26 |
H26B |
240.0 |
240.0 |
| H26A |
C26 |
H26 |
H26B |
120.0 |
120.0 |
| C15 |
C26 |
H26A |
H26 |
240.0 |
240.0 |
| C15 |
C26 |
H26A |
H26B |
120.0 |
120.0 |
| H26 |
C26 |
H26A |
H26B |
240.0 |
240.0 |
| C15 |
C26 |
H26B |
H26 |
120.1 |
120.0 |
| C15 |
C26 |
H26B |
H26A |
240.0 |
240.0 |
| H26 |
C26 |
H26B |
H26A |
119.9 |
120.0 |
| H27 |
C27 |
C19 |
C28 |
56.9 |
300.0 |
| H27 |
C27 |
C19 |
H19 |
299.0 |
180.0 |
| C19 |
C27 |
H27 |
H27A |
120.0 |
120.1 |
| C19 |
C27 |
H27 |
H27B |
240.0 |
240.0 |
| H27A |
C27 |
H27 |
H27B |
120.0 |
119.9 |
| H27A |
C27 |
C19 |
C28 |
176.9 |
60.0 |
| H27A |
C27 |
C19 |
H19 |
59.0 |
300.0 |
| C19 |
C27 |
H27A |
H27 |
240.0 |
240.0 |
| C19 |
C27 |
H27A |
H27B |
120.0 |
120.0 |
| H27 |
C27 |
H27A |
H27B |
240.0 |
240.1 |
| H27B |
C27 |
C19 |
C28 |
296.9 |
180.0 |
| H27B |
C27 |
C19 |
H19 |
179.0 |
60.0 |
| C19 |
C27 |
H27B |
H27 |
120.0 |
120.0 |
| C19 |
C27 |
H27B |
H27A |
240.0 |
239.9 |
| H27 |
C27 |
H27B |
H27A |
120.0 |
119.9 |
| H28 |
C28 |
C19 |
H19 |
61.1 |
60.0 |
| C19 |
C28 |
H28 |
H28A |
120.0 |
120.0 |
| C19 |
C28 |
H28 |
H28B |
240.0 |
240.0 |
| H28A |
C28 |
H28 |
H28B |
120.0 |
120.0 |
| H28A |
C28 |
C19 |
H19 |
181.1 |
180.0 |
| C19 |
C28 |
H28A |
H28 |
240.0 |
240.0 |
| C19 |
C28 |
H28A |
H28B |
120.0 |
120.0 |
| H28 |
C28 |
H28A |
H28B |
240.0 |
239.9 |
| H28B |
C28 |
C19 |
H19 |
301.1 |
300.0 |
| C19 |
C28 |
H28B |
H28 |
120.0 |
120.0 |
| C19 |
C28 |
H28B |
H28A |
240.0 |
240.0 |
| H28 |
C28 |
H28B |
H28A |
120.0 |
120.0 |
| N11 |
N10 |
HN10 |
C15 |
180.0 |
179.6 |
| HN10 |
N10 |
C15 |
C26 |
0.4 |
359.7 |