PDB Chemical Component 024

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 024

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
S1 C2 1.704 1.785
S1 C5 1.706 1.785
C2 C3 1.420 1.394
C2 C6 1.411 1.414
C3 C4 1.424 1.372
C3 O20 1.420 1.358
C4 C5 1.423 1.384
C4 BR19 1.915 1.891
C5 C9 1.497 1.478
C6 O7 1.233 1.218
C6 O8 1.227 1.350
O8 HO8 0.950 0.967
C9 C10 1.440 1.394
C9 C14 1.440 1.396
C10 C11 1.430 1.387
C10 H10 1.080 1.079
C11 C12 1.435 1.390
C11 N27 1.428 1.397
C12 C13 1.423 1.383
C12 H12 1.080 1.080
C13 C14 1.425 1.380
C13 H13 1.080 1.080
C14 H14 1.080 1.081
O20 C21 1.427 1.429
C21 C22 1.525 1.507
C21 H211 1.100 1.090
C21 H212 1.100 1.090
C22 O25 1.243 1.342
C22 O26 1.225 1.209
O25 HO25 0.950 0.967
N27 C28 1.411 1.466
N27 HN27 1.000 0.970
C28 C30 1.537 1.530
C28 C34 1.551 1.530
C28 H28 1.100 1.090
C30 C31 1.549 1.530
C30 H301 1.100 1.090
C30 H302 1.100 1.090
C31 C32 1.556 1.530
C31 H311 1.100 1.091
C31 H312 1.100 1.090
C32 C33 1.555 1.530
C32 H321 1.100 1.090
C32 H322 1.100 1.090
C33 C34 1.541 1.530
C33 H331 1.100 1.090
C33 H332 1.100 1.090
C34 H341 1.100 1.090
C34 H342 1.100 1.090

Bond Angles for 024

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 S1 C5 95.8 98.3
S1 C2 C3 109.5 102.2
S1 C2 C6 120.7 128.9
S1 C5 C4 108.9 102.3
S1 C5 C9 120.7 128.8
C3 C2 C6 129.8 128.9
C2 C3 C4 112.5 118.4
C2 C3 O20 126.3 120.8
C2 C6 O7 117.7 120.0
C2 C6 O8 120.9 120.0
C4 C3 O20 121.2 120.8
C3 C4 C5 113.3 118.8
C3 C4 BR19 121.5 120.6
C3 O20 C21 116.4 106.8
C5 C4 BR19 125.1 120.6
C4 C5 C9 130.4 128.8
C5 C9 C10 124.3 120.1
C5 C9 C14 116.8 120.1
O7 C6 O8 121.4 120.0
C6 O8 HO8 109.5 106.8
C10 C9 C14 118.9 119.8
C9 C10 C11 119.3 119.8
C9 C10 H10 120.3 120.1
C9 C14 C13 121.8 120.0
C9 C14 H14 119.1 120.0
C11 C10 H10 120.4 120.1
C10 C11 C12 120.9 120.0
C10 C11 N27 120.4 120.0
C12 C11 N27 118.7 120.0
C11 C12 C13 120.3 120.2
C11 C12 H12 119.8 120.0
C11 N27 C28 143.9 120.0
C11 N27 HN27 99.3 120.0
C13 C12 H12 119.8 119.8
C12 C13 C14 118.8 120.2
C12 C13 H13 120.6 119.9
C14 C13 H13 120.6 119.9
C13 C14 H14 119.1 120.0
O20 C21 C22 107.8 109.5
O20 C21 H211 110.4 109.4
O20 C21 H212 110.0 109.5
C22 C21 H211 110.4 109.5
C22 C21 H212 110.0 109.5
C21 C22 O25 119.0 120.0
C21 C22 O26 118.3 120.0
H211 C21 H212 108.2 109.5
O25 C22 O26 122.6 120.0
C22 O25 HO25 109.5 120.1
C28 N27 HN27 99.3 120.0
N27 C28 C30 112.8 109.5
N27 C28 C34 107.3 109.5
N27 C28 H28 109.6 109.5
C30 C28 C34 111.9 109.5
C30 C28 H28 104.8 109.5
C28 C30 C31 108.3 109.5
C28 C30 H301 110.1 109.5
C28 C30 H302 109.8 109.5
C34 C28 H28 110.5 109.5
C28 C34 C33 110.8 109.4
C28 C34 H341 108.8 109.5
C28 C34 H342 109.1 109.5
C31 C30 H301 110.1 109.5
C31 C30 H302 109.9 109.5
C30 C31 C32 112.4 109.5
C30 C31 H311 107.8 109.4
C30 C31 H312 108.5 109.5
H301 C30 H302 108.6 109.4
C32 C31 H311 107.8 109.5
C32 C31 H312 108.5 109.5
C31 C32 C33 113.1 109.5
C31 C32 H321 107.4 109.4
C31 C32 H322 108.3 109.5
H311 C31 H312 111.8 109.5
C33 C32 H321 107.5 109.5
C33 C32 H322 108.3 109.5
C32 C33 C34 111.3 109.5
C32 C33 H331 108.4 109.5
C32 C33 H332 108.9 109.4
H321 C32 H322 112.4 109.5
C34 C33 H331 108.4 109.5
C34 C33 H332 108.8 109.5
C33 C34 H341 108.7 109.5
C33 C34 H342 109.0 109.5
H331 C33 H332 110.9 109.5
H341 C34 H342 110.4 109.5

Torsion Angles for 024

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 S1 C5 C4 359.7 359.8
C2 S1 C5 C9 179.1 179.9
C3 C2 S1 C6 179.6 180.4
S1 C2 C3 C4 0.3 359.6
S1 C2 C3 O20 180.4 179.9
S1 C2 C6 O7 348.1 180.0
S1 C2 C6 O8 168.1 360.0
C5 S1 C2 C3 0.0 0.3
C5 S1 C2 C6 180.5 180.0
C3 C4 C5 S1 0.6 360.0
S1 C5 C4 BR19 180.0 180.0
C4 C5 S1 C9 180.6 179.9
S1 C5 C9 C10 150.4 39.7
S1 C5 C9 C14 329.3 219.9
C3 C2 S1 C5 0.0 0.3
S1 C2 C3 C6 180.5 179.6
C3 C2 C6 O7 168.7 359.6
C3 C2 C6 O8 348.7 179.5
C4 C3 C2 O20 179.8 179.7
C2 C3 C4 C5 359.4 0.3
C2 C3 C4 BR19 180.0 180.3
C2 C3 O20 C21 265.8 269.7
C6 C2 S1 C5 180.5 180.0
S1 C2 C6 C3 179.5 180.4
C6 C2 C3 C4 179.8 179.9
C6 C2 C3 O20 359.9 0.2
O7 C6 C2 O8 180.0 180.0
C2 C6 O8 HO8 180.0 179.9
S1 C5 C4 C3 0.6 360.0
C4 C3 C2 C6 179.8 179.9
C2 C3 C4 O20 180.2 180.3
C4 C3 O20 C21 86.0 90.0
C5 C4 C3 BR19 179.5 180.0
C3 C4 C5 C9 181.2 179.9
O20 C3 C2 C6 359.9 0.2
C2 C3 O20 C4 179.8 179.7
O20 C3 C4 C5 179.3 180.0
O20 C3 C4 BR19 359.8 360.0
C3 O20 C21 C22 193.8 180.0
C3 O20 C21 H211 73.1 60.0
C3 O20 C21 H212 313.8 300.0
S1 C5 C4 C9 179.4 180.1
C5 C4 C3 O20 179.3 180.0
C3 C4 C5 BR19 180.5 180.0
C4 C5 C9 C10 329.6 219.7
C4 C5 C9 C14 148.6 40.0
BR19 C4 C3 O20 359.8 360.0
C3 C4 BR19 C5 179.4 180.0
BR19 C4 C5 C9 0.7 359.9
S1 C5 C9 C4 180.7 179.9
C9 C5 C4 BR19 0.7 359.9
C10 C9 C5 C14 181.0 179.7
C5 C9 C10 C11 178.9 179.7
C5 C9 C10 H10 358.9 0.3
C5 C9 C14 C13 180.8 180.0
C5 C9 C14 H14 0.8 360.0
C2 C6 O7 O8 180.0 180.0
O7 C6 O8 HO8 0.0 359.9
C2 C6 O8 O7 180.0 180.0
C5 C9 C10 C14 178.9 180.3
C10 C9 C14 C13 359.8 0.2
C10 C9 C14 H14 179.8 180.2
C11 C10 C9 H10 180.0 179.3
C9 C10 C11 C12 0.2 0.6
C9 C10 C11 N27 181.1 180.3
C5 C9 C14 C10 181.0 179.7
C14 C9 C10 C11 359.9 359.4
C14 C9 C10 H10 179.9 180.1
C12 C13 C14 C9 0.3 0.0
C9 C14 C13 H13 180.3 180.0
C13 C14 C9 H14 180.0 180.0
C11 C10 C9 C14 359.9 359.4
C9 C10 C11 H10 180.0 180.7
C12 C11 C10 N27 179.0 180.4
C10 C11 C12 C13 0.0 359.6
C10 C11 C12 H12 180.0 179.6
C10 C11 N27 C28 133.6 180.4
C10 C11 N27 HN27 253.6 0.4
H10 C10 C9 C14 179.9 180.1
C9 C10 H10 C11 180.0 179.3
H10 C10 C11 C12 180.2 180.0
H10 C10 C11 N27 1.1 359.6
C12 C11 C10 H10 180.2 180.0
C10 C11 C12 N27 180.9 179.6
C12 C11 N27 C28 314.5 360.0
C12 C11 N27 HN27 74.6 180.0
C13 C12 C11 H12 180.0 180.0
C11 C12 C13 C14 359.8 0.0
C11 C12 C13 H13 179.8 180.1
N27 C11 C10 H10 1.1 359.6
C10 C11 N27 C12 179.1 180.4
N27 C11 C12 C13 179.1 180.0
N27 C11 C12 H12 359.0 0.0
C28 N27 C11 HN27 240.0 180.0
C11 N27 C28 C30 189.5 155.0
C11 N27 C28 C34 313.2 275.0
C11 N27 C28 H28 73.2 35.0
C9 C14 C13 C12 0.3 0.0
C13 C12 C11 N27 179.1 180.0
C11 C12 C13 H12 180.0 180.0
C14 C13 C12 H13 180.0 179.9
C12 C13 C14 H14 180.3 180.1
H12 C12 C11 N27 359.0 0.0
C11 C12 H12 C13 180.0 180.0
H12 C12 C13 C14 179.8 180.0
H12 C12 C13 H13 359.8 0.1
C9 C14 C13 H14 180.0 180.0
C14 C13 C12 H12 179.8 180.0
C12 C13 C14 H13 180.0 180.1
H13 C13 C12 H12 359.8 0.1
C12 C13 H13 C14 180.0 179.9
H13 C13 C14 H14 0.3 360.0
C9 C14 H14 C13 180.0 180.0
H14 C14 C13 H13 0.3 360.0
C22 C21 O20 H211 120.7 120.0
C22 C21 O20 H212 240.0 240.0
O20 C21 C22 O25 351.9 180.0
O20 C21 C22 O26 171.7 0.0
H211 C21 O20 H212 119.3 120.0
O20 C21 C22 H211 239.3 240.1
O20 C21 C22 H212 120.0 120.0
H211 C21 C22 H212 240.7 240.0
O25 C22 C21 O26 180.2 180.0
C21 C22 O25 HO25 179.8 180.0
O20 C21 H211 C22 119.1 120.0
O20 C21 H211 H212 239.5 240.0
C22 C21 H211 H212 120.5 120.0
H211 C21 C22 O25 112.5 300.0
H211 C21 C22 O26 292.3 120.0
O20 C21 H212 C22 241.4 240.0
O20 C21 H212 H211 120.7 120.0
C22 C21 H212 H211 239.3 240.0
H212 C21 C22 O25 231.9 60.0
H212 C21 C22 O26 51.7 240.0
O25 C22 C21 H211 112.5 300.0
O25 C22 C21 H212 231.9 60.0
C21 C22 O25 O26 179.8 180.0
O26 C22 C21 H211 292.3 120.0
O26 C22 C21 H212 51.7 240.0
C21 C22 O26 O25 180.2 180.0
O26 C22 O25 HO25 360.0 0.0
HO25 O25 C22 O26 360.0 0.0
C11 N27 C28 HN27 120.0 180.0
C30 C28 N27 C34 236.3 240.0
C30 C28 N27 H28 116.3 120.0
N27 C28 C30 C31 181.0 180.0
N27 C28 C30 H301 60.6 300.0
N27 C28 C30 H302 301.0 60.0
C34 C28 N27 H28 240.0 240.0
N27 C28 C34 C33 176.1 180.0
N27 C28 C34 H341 56.6 300.0
N27 C28 C34 H342 296.1 60.0
C11 N27 HN27 C28 211.2 180.0
HN27 N27 C28 C30 69.5 335.0
HN27 N27 C28 C34 193.2 95.0
HN27 N27 C28 H28 313.2 215.0
C30 C28 N27 HN27 69.5 335.0
N27 C28 C30 C34 121.1 120.0
N27 C28 C30 H28 240.9 240.0
C34 C28 C30 H28 119.7 120.0
C30 C28 C34 C33 300.3 300.0
C30 C28 C34 H341 180.8 60.0
C30 C28 C34 H342 60.3 180.0
C31 C30 C28 H301 120.5 240.0
C31 C30 C28 H302 240.0 120.0
C28 C30 C31 C32 304.4 300.0
C28 C30 C31 H311 185.7 60.0
C28 C30 C31 H312 64.4 180.0
H301 C30 C28 H302 119.5 240.0
C34 C28 N27 HN27 193.2 95.0
N27 C28 C34 C30 235.8 240.0
N27 C28 C34 H28 119.4 120.0
C30 C28 C34 H28 243.7 240.0
C34 C28 C30 C31 59.9 60.0
C34 C28 C30 H301 299.4 180.0
C34 C28 C30 H302 179.9 300.0
C32 C33 C34 C28 52.9 60.0
C28 C34 C33 H331 172.1 300.0
C28 C34 C33 H332 292.9 179.9
C33 C34 C28 H341 119.5 240.0
C33 C34 C28 H342 240.0 120.0
H341 C34 C28 H342 120.5 240.0
H28 C28 N27 HN27 313.2 215.0
N27 C28 H28 C30 121.3 120.0
N27 C28 H28 C34 242.0 240.0
C30 C28 H28 C34 120.7 120.0
H28 C28 C30 C31 300.2 300.0
H28 C28 C30 H301 179.7 60.0
H28 C28 C30 H302 60.2 180.0
H28 C28 C34 C33 56.6 60.0
H28 C28 C34 H341 297.2 180.0
H28 C28 C34 H342 176.6 300.0
C31 C30 C28 C34 59.9 60.0
C31 C30 C28 H28 300.2 300.0
C28 C30 C31 H301 239.6 120.0
C28 C30 C31 H302 120.0 240.0
H301 C30 C31 H302 240.4 120.0
C32 C31 C30 H311 118.7 240.0
C32 C31 C30 H312 240.0 120.0
C30 C31 C32 C33 51.9 60.0
C30 C31 C32 H321 293.5 180.0
C30 C31 C32 H322 171.9 300.0
H311 C31 C30 H312 121.2 240.0
H301 C30 C28 C34 299.4 180.0
H301 C30 C28 H28 179.7 60.0
C28 C30 H301 C31 119.4 240.0
C28 C30 H301 H302 239.7 120.0
C31 C30 H301 H302 120.3 240.0
H301 C30 C31 C32 64.8 180.0
H301 C30 C31 H311 306.1 300.0
H301 C30 C31 H312 184.9 60.0
H302 C30 C28 C34 179.9 300.0
H302 C30 C28 H28 60.2 180.0
C28 C30 H302 C31 240.9 120.0
C28 C30 H302 H301 120.4 240.0
C31 C30 H302 H301 239.5 120.0
H302 C30 C31 C32 184.4 60.0
H302 C30 C31 H311 65.7 180.0
H302 C30 C31 H312 304.4 300.0
C32 C31 C30 H301 64.8 180.0
C32 C31 C30 H302 184.4 60.0
C30 C31 C32 H311 241.3 120.0
C30 C31 C32 H312 120.0 240.0
H311 C31 C32 H312 238.8 120.0
C33 C32 C31 H321 118.4 240.0
C33 C32 C31 H322 240.0 120.1
C31 C32 C33 C34 310.2 299.9
C31 C32 C33 H331 191.0 60.0
C31 C32 C33 H332 70.2 180.0
H321 C32 C31 H322 121.6 240.0
H311 C31 C30 H301 306.1 300.0
H311 C31 C30 H302 65.7 180.0
C30 C31 H311 C32 121.6 240.0
C30 C31 H311 H312 240.8 120.0
C32 C31 H311 H312 119.2 240.0
H311 C31 C32 C33 170.6 300.1
H311 C31 C32 H321 52.2 60.0
H311 C31 C32 H322 290.6 180.0
H312 C31 C30 H301 184.9 60.0
H312 C31 C30 H302 304.4 300.0
C30 C31 H312 C32 237.6 120.0
C30 C31 H312 H311 118.8 240.0
C32 C31 H312 H311 241.2 120.0
H312 C31 C32 C33 291.9 180.0
H312 C31 C32 H321 173.5 300.0
H312 C31 C32 H322 51.9 60.0
C28 C34 C33 C32 52.9 60.0
C33 C32 C31 H311 170.6 300.1
C33 C32 C31 H312 291.9 180.0
C31 C32 C33 H321 241.6 120.0
C31 C32 C33 H322 120.0 240.0
H321 C32 C33 H322 238.4 120.0
C34 C33 C32 H331 119.2 240.0
C34 C33 C32 H332 240.0 119.9
C32 C33 C34 H341 172.4 300.1
C32 C33 C34 H342 292.9 180.0
H331 C33 C32 H332 120.8 240.0
H321 C32 C31 H311 52.2 60.0
H321 C32 C31 H312 173.5 300.0
C31 C32 H321 C33 122.0 240.0
C31 C32 H321 H322 241.0 120.0
C33 C32 H321 H322 119.0 239.9
H321 C32 C33 C34 68.6 180.0
H321 C32 C33 H331 309.4 300.0
H321 C32 C33 H332 188.6 60.1
H322 C32 C31 H311 290.6 180.0
H322 C32 C31 H312 51.9 60.0
C31 C32 H322 C33 237.0 120.0
C31 C32 H322 H321 118.5 240.0
C33 C32 H322 H321 241.5 120.0
H322 C32 C33 C34 190.2 60.0
H322 C32 C33 H331 71.0 180.0
H322 C32 C33 H332 310.2 300.0
C33 C34 C28 H28 56.6 60.0
C28 C34 C33 H341 240.5 120.0
C28 C34 C33 H342 120.0 240.0
C34 C33 C32 H321 68.6 180.0
C34 C33 C32 H322 190.2 60.0
C32 C33 C34 H331 240.8 120.1
C32 C33 C34 H332 120.0 240.1
H331 C33 C34 H332 239.2 120.0
H341 C34 C33 H342 239.5 120.0
H331 C33 C32 H321 309.4 300.0
H331 C33 C32 H322 71.0 180.0
C32 C33 H331 C34 121.0 240.0
C32 C33 H331 H332 240.5 120.0
C34 C33 H331 H332 119.5 240.0
H331 C33 C34 H341 291.6 180.0
H331 C33 C34 H342 52.1 60.0
H332 C33 C32 H321 188.6 60.1
H332 C33 C32 H322 310.2 300.0
C32 C33 H332 C34 238.5 119.9
C32 C33 H332 H331 119.3 240.0
C34 C33 H332 H331 240.8 120.0
H332 C33 C34 H341 52.4 60.0
H332 C33 C34 H342 172.9 299.9
H341 C34 C28 H28 297.2 180.0
C28 C34 H341 C33 120.7 240.0
C28 C34 H341 H342 240.3 120.0
H341 C34 C33 H331 291.6 180.0
H341 C34 C33 H332 52.4 60.0
C33 C34 H341 H342 119.6 240.0
H342 C34 C28 H28 176.6 300.0
C28 C34 H342 C33 238.9 120.0
C28 C34 H342 H341 119.5 240.0
H342 C34 C33 H331 52.1 60.0
H342 C34 C33 H332 172.9 299.9
C33 C34 H342 H341 240.6 120.0