PDB Chemical Component 00C
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 00C
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.497 |
1.468 |
| CA |
C |
1.518 |
1.507 |
| CA |
CB |
1.541 |
1.530 |
| C |
OXT |
1.430 |
1.342 |
| O |
C |
1.216 |
1.207 |
| SG |
CB |
1.825 |
1.813 |
| SG |
O3 |
1.469 |
1.421 |
| SG |
OD1 |
1.680 |
1.522 |
| OD2 |
SG |
1.464 |
1.421 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| CA |
HA |
1.100 |
1.091 |
| CB |
HB |
1.100 |
1.090 |
| CB |
HBA |
1.100 |
1.089 |
| OXT |
HXT |
0.950 |
0.967 |
| OD1 |
HOD1 |
0.950 |
0.967 |
Bond Angles for 00C
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N |
CA |
C |
106.8 |
109.5 |
| N |
CA |
CB |
113.5 |
109.5 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.4 |
111.0 |
| N |
CA |
HA |
107.8 |
109.5 |
| C |
CA |
CB |
107.0 |
109.5 |
| CA |
C |
OXT |
120.0 |
120.0 |
| C |
CA |
HA |
114.2 |
109.5 |
| CB |
CA |
HA |
107.7 |
109.5 |
| CA |
CB |
HB |
108.1 |
109.5 |
| CA |
CB |
HBA |
107.2 |
109.5 |
| O |
C |
OXT |
120.0 |
120.0 |
| C |
OXT |
HXT |
109.5 |
116.9 |
| SG |
CB |
HB |
108.1 |
109.5 |
| SG |
CB |
HBA |
107.2 |
109.5 |
| O3 |
SG |
OD1 |
105.4 |
104.2 |
| OD2 |
SG |
O3 |
120.4 |
121.0 |
| OD2 |
SG |
OD1 |
106.0 |
104.3 |
| SG |
OD1 |
HOD1 |
109.5 |
114.1 |
| H |
N |
H2 |
109.5 |
111.0 |
| HB |
CB |
HBA |
112.7 |
109.5 |
Torsion Angles for 00C
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
CA |
N |
CB |
242.4 |
240.0 |
| N |
CA |
C |
OXT |
228.3 |
200.0 |
| C |
CA |
N |
HA |
123.2 |
120.0 |
| CB |
CA |
N |
HA |
240.8 |
240.0 |
| N |
CA |
CB |
HB |
183.7 |
185.0 |
| N |
CA |
CB |
HBA |
305.5 |
305.0 |
| H |
N |
CA |
H2 |
239.9 |
236.0 |
| N |
CA |
C |
CB |
121.8 |
120.0 |
| C |
CA |
N |
H |
87.5 |
176.0 |
| C |
CA |
N |
H2 |
207.6 |
300.0 |
| N |
CA |
C |
HA |
240.9 |
240.0 |
| CB |
CA |
C |
HA |
119.0 |
120.0 |
| C |
CA |
CB |
HB |
301.2 |
305.0 |
| C |
CA |
CB |
HBA |
63.0 |
65.0 |
| O |
C |
CA |
OXT |
180.0 |
180.0 |
| CA |
C |
OXT |
HXT |
180.1 |
180.0 |
| N |
CA |
CB |
C |
242.5 |
240.0 |
| CB |
CA |
N |
H |
205.1 |
296.0 |
| CB |
CA |
N |
H2 |
325.2 |
60.0 |
| N |
CA |
CB |
HA |
119.3 |
120.0 |
| CB |
CA |
C |
OXT |
106.5 |
80.0 |
| C |
CA |
CB |
HA |
236.8 |
240.0 |
| SG |
CB |
CA |
HB |
240.0 |
240.0 |
| SG |
CB |
CA |
HBA |
118.2 |
120.0 |
| HB |
CB |
CA |
HBA |
238.2 |
240.0 |
| OXT |
C |
CA |
CB |
106.5 |
80.0 |
| OXT |
C |
CA |
HA |
347.4 |
320.0 |
| O |
C |
CA |
CB |
286.5 |
260.0 |
| CA |
C |
O |
OXT |
180.0 |
180.0 |
| O |
C |
CA |
HA |
167.5 |
140.0 |
| O |
C |
OXT |
HXT |
0.0 |
360.0 |
| SG |
CB |
CA |
HA |
304.4 |
305.0 |
| CA |
CB |
SG |
HB |
120.0 |
120.0 |
| CA |
CB |
SG |
HBA |
241.8 |
240.0 |
| HB |
CB |
SG |
HBA |
121.8 |
120.0 |
| O3 |
SG |
CB |
HB |
43.2 |
308.4 |
| O3 |
SG |
CB |
HBA |
281.4 |
188.4 |
| OD2 |
SG |
O3 |
OD1 |
240.6 |
243.3 |
| O3 |
SG |
OD1 |
HOD1 |
204.6 |
296.1 |
| OD1 |
SG |
CB |
HB |
160.7 |
60.0 |
| OD1 |
SG |
CB |
HBA |
38.9 |
300.0 |
| OD2 |
SG |
OD1 |
O3 |
128.6 |
127.8 |
| OD2 |
SG |
CB |
HB |
278.5 |
171.6 |
| OD2 |
SG |
CB |
HBA |
156.7 |
51.6 |
| O3 |
SG |
OD2 |
OD1 |
119.2 |
116.7 |
| OD2 |
SG |
OD1 |
HOD1 |
333.3 |
63.9 |
| H |
N |
CA |
C |
87.5 |
176.0 |
| H |
N |
CA |
CB |
205.1 |
296.0 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| H |
N |
CA |
HA |
324.3 |
56.0 |
| H2 |
N |
CA |
C |
207.6 |
300.0 |
| H2 |
N |
CA |
CB |
325.2 |
60.0 |
| CA |
N |
H2 |
H |
240.0 |
236.0 |
| H2 |
N |
CA |
HA |
84.4 |
180.0 |
| N |
CA |
HA |
C |
118.5 |
120.0 |
| N |
CA |
HA |
CB |
237.2 |
240.0 |
| HA |
CA |
N |
H |
324.3 |
56.0 |
| HA |
CA |
N |
H2 |
84.4 |
180.0 |
| C |
CA |
HA |
CB |
118.6 |
120.0 |
| HA |
CA |
C |
OXT |
347.4 |
320.0 |
| HA |
CA |
CB |
HB |
64.4 |
65.0 |
| HA |
CA |
CB |
HBA |
186.2 |
185.0 |
| HB |
CB |
CA |
HA |
64.4 |
65.0 |
| CA |
CB |
HB |
HBA |
118.3 |
120.0 |
| SG |
CB |
HB |
HBA |
241.7 |
240.0 |
| HBA |
CB |
CA |
HA |
186.2 |
185.0 |
| CA |
CB |
HBA |
HB |
241.1 |
240.0 |
| SG |
CB |
HBA |
HB |
118.8 |
120.0 |